Dipodomys spectabilis (banner-tailed kangaroo rat): 122111854
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Entry
122111854 CDS
T07891
Symbol
Lamb1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04151
PI3K-Akt signaling pathway
dsp04510
Focal adhesion
dsp04512
ECM-receptor interaction
dsp05145
Toxoplasmosis
dsp05146
Amoebiasis
dsp05165
Human papillomavirus infection
dsp05200
Pathways in cancer
dsp05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122111854 (Lamb1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122111854 (Lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122111854 (Lamb1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122111854 (Lamb1)
09162 Cancer: specific types
05222 Small cell lung cancer
122111854 (Lamb1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122111854 (Lamb1)
09174 Infectious disease: parasitic
05146 Amoebiasis
122111854 (Lamb1)
05145 Toxoplasmosis
122111854 (Lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ATG17_like
BNR_6
Motif
Other DBs
NCBI-GeneID:
122111854
NCBI-ProteinID:
XP_042540560
LinkDB
All DBs
Position
Unknown
AA seq
1786 aa
AA seq
DB search
MGLLPVLAFSCWALCGARVRAQEPDFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHK
PEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVEN
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTG
PMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKL
HTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVHGFDEEVEGMVHGHCMC
RHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGG
VCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNLCERCSCDPAGSQNGGICDGYTDFSAG
LIAGQCRCKLHVEGEHCDVCKEGFYDLSAEDPFGCKSCACNPLGTIPGGNPCDSETGYCY
CKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALSNSCSPESGQCSCRPHMIGRQC
NEVESGYYFTTLDHYIYEAEEGHLGPGVTVVQRQYIQDRIPSWTGAGFVRVPEGAYLEFF
IDNIPYSMEYDILIRYEPQLPDHWEKAVITVQRPGKIPTSSRCGNTVPDDDNQVVSLSPG
SRYVVLPRPVCFEKGMNYTVRLELPQYTSYDSDVESPYTLIDSLVLMPYCKSLDIFTIGG
SGDGEVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQMGLACECDPQGS
LSSVCDPSGGQCQCRPNVVGRTCDRCAPGTFGFGPSGCRACDCDLQGSVNAFCDAVTGQC
QCFHGVYGRQCDRCLPGYWGFPSCQPCQCNGHADDCDSVTGECVNCQDYTMGHNCERCLA
GYYGNPIIGSGDHCRPCPCPDGPESGRQFANSCYQDPVTLQLACVCEPGYIGSRCEDCAS
GFFGNPSDIGGSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQLCQHGYYGDA
LRQDCRKCVCNDLGTVQQHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGKG
CEPCDCSAAHSFGPSCNEFSGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIE
TPQCDQTTGQCVCVEGVEGPRCDKCTRGYSGVFPDCAPCHQCFALWDVIITELANRTHRF
LEKAKALKISGVIGPYREIVDSVEKKVKEIEDILAQNPAAEPLKNIGHLFEEAEKLTKDI
TEKMSQVEVKLADTASQNNSTAGELDLLQAEANSLDKTVSELSEQLEFIKNSDIRGALDS
ITKYFQMSLEAEERVNATTTDPNNTVDQSASMRERVEDLLMEQESQFKEKQEEQASLLDE
LAGKLQSLDLSAAAEMTCGTPPGEDCSQTECGGPNCRTDEGQKKCGGPGCGGLVTVAHNA
WQKAMDFDRDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKTNTTKEKVDKSNKDL
RNLIKQIRDFLTEDGADLDSIEAVANEVLKMEMPSTPEQLQSLTEDIRGRVESLSQVEVI
LQQSAADIARAETLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDI
QGTQTLLTSIESETVASEETLFNASQRISELERNVEELKRKATQNSGEAEYIEKVVYTVK
QNADDVKKTLDGELDEKYKKVESLIAKKTEESADARRKAEMLQNEAKTLLAQANSKLQLL
KDLERKYEDNQKYLEDKAQELVRLEGEVRSLLQDISEKVTIYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggggctgctcccggtgctcgccttcagctgctgggccttgtgcggagccagagtgcgc
gcccaggaacccgacttcagctatggctgtgcggaaggcagctgctaccctgccacgggc
gaccttctcattggccgagcccagaagctctccgtgacctcgacgtgcggactgcacaag
cccgagccctactgtatcgtcagccacctgcaggaggacaagaagtgcttcatttgcaac
tcccaagatccttatcatgagaccctcaatcctgacagccatctcattgaaaatgtggtc
actacatttgctccaaaccgcttaaagatttggtggcaatctgaaaatggtgtggaaaat
gtaactatccaactggatttggaagcagaattccatttcactcatctcataatgactttc
aagacattccgtccagctgctatgctgatagagcggtcatctgactttgggaagacctgg
ggtgtatacagatacttcgcctatgattgtgagagctccttcccaggcatttccactggc
cccatgaagaaagtggatgacataatctgtgactcccgatactctgacatagaaccctca
acagaaggagaggtgatatttcgtgctttagatccagctttcaaaatagaagatccttat
agcccaaggatacagaatctactaaaaatcaccaacttgaggatcaagtttgtgaagctg
catactttgggagataaccttttggattccagaatggaaatcagagagaagtactattat
gcggtgtatgacatggtggttcgaggaaactgcttctgctacggccatgccagtgaatgt
gcccctgtgcacggattcgatgaagaagtggaaggaatggtacacggacactgcatgtgc
aggcataacaccaagggtttgaactgtgaacagtgcatggatttctaccacgatttaccc
tggagacctgctgaaggccgaaacagcaatgcctgtaaaaagtgcaactgcaatgaacat
tccagctcatgccactttgacatggcggttttcctggccactgggaatgtcagtggaggc
gtgtgtgacgactgtcagcataacaccatgggacgcaactgtgagcaatgcaagccgttc
tactaccagcacccggagagggacatccgagaccccaatctctgtgaaagatgttcatgt
gacccagctggctctcagaatgggggcatctgtgacggttacactgacttttcggctggg
ctcattgctggccagtgtcggtgtaagttgcacgtggaaggagaacactgtgatgtttgc
aaagaaggcttctatgacttaagtgccgaagacccatttgggtgtaaatcttgtgcttgc
aaccccctgggaacaattcctggtgggaatccttgtgactccgagactggctactgctac
tgtaagcgtctggtgacgggacagcgctgtgaccagtgtctgccacagcactggggcctg
agtaacgatttggacgggtgtcggccttgtgactgtgacctcgggggagccctcagcaat
agctgctccccggagtcaggccagtgctcctgtcggcctcacatgatcggacggcagtgc
aatgaggtggagtctggttattattttaccaccttggaccactacatctatgaagctgag
gaaggccacctggggcctggggtcactgtagtgcagcggcagtacatccaggatcggatt
ccctcctggacgggagctggctttgtccgagtgcctgagggggcgtatttggagtttttt
attgacaacataccatattccatggagtatgacatcctaattcgctatgagccacagctt
cctgaccactgggaaaaagctgtcatcactgtgcagcggcctgggaagatcccaaccagc
agccggtgtggtaacactgttccggatgatgacaaccaggtggtatccttatcaccaggc
tccagatatgtggtccttcctcgcccagtgtgtttcgagaagggaatgaactacacagtg
aggttggagctgccccagtacacctcttacgacagcgatgtggagagcccctacacgctc
attgactcactcgttctcatgccgtactgcaaatccctggacatcttcaccataggcggt
tccggagatggggaggtcactaacagtgcctgggagacctttcagagataccggtgtctg
gagaacagccgaagtgtcgtgaagacacccatgactgatgtttgcagaaatatcatcttc
agcatctccgccctgctacaccagatgggtctggcttgcgaatgtgaccctcagggttct
ttgagttctgtgtgcgaccccagcggaggccagtgccagtgccggccaaatgtagttgga
aggacctgcgacaggtgtgcaccaggaacctttggctttggtcccagtggatgcagagct
tgtgactgtgatctgcaaggatctgtcaatgccttctgtgatgctgtcactggccagtgc
cagtgcttccacggggtgtacgggcgccagtgtgaccgatgcttacctgggtactggggc
tttcccagctgccagccctgccagtgtaatggtcatgccgatgactgtgactcagtgaca
ggcgagtgtgtcaactgccaggactacaccatgggccataactgtgaaaggtgcttggct
ggttactatggcaaccccatcattgggtcaggagatcactgccgaccttgcccttgtcca
gatggtcctgaaagcggacgccagtttgccaacagctgttatcaagatcctgttactctg
cagcttgcatgtgtttgtgagcctgggtacattggctccagatgtgaggactgcgcttca
ggattctttggcaatccctcagacattggagggtcctgtcagccttgtcagtgtcaccac
aacattgacaccactgacccggaagcttgtgacaaggagactggaaggtgcctcaagtgc
ctgtaccacacagaaggggaccactgccagctctgccaacatggctactatggcgatgcc
ctccggcaggactgcagaaagtgtgtctgcaatgacctgggcactgtgcagcagcactgt
aatggttctgactgccagtgtgacaaagctactggccagtgcttgtgtcttcctaatgtg
atcgggcagaactgtgaccgctgtgcgcccaacacctggcagctggccagcgggaagggc
tgtgagccgtgtgactgcagtgctgcccattccttcgggccttcttgtaatgagttctca
gggcagtgccagtgcatgccaggctttggaggccgcacctgcagcgagtgccaggagctc
ttctggggagaccccgatgtggagtgccgagcctgtgactgtgacccccgaggcatcgag
acaccgcagtgtgaccagaccacgggccagtgtgtctgtgtggagggtgttgagggccca
cgctgtgacaagtgcactcggggctactcaggggtcttccctgactgcgcaccctgccac
cagtgctttgctctgtgggacgtgattatcactgagctggccaacaggacccacaggttc
ctagagaaggccaaggccttgaagatcagtggcgtgatcgggccttaccgggagattgtg
gactcggtggagaagaaggttaaagagatagaagacatcctggcccagaacccagcagca
gagccactgaaaaatatcggacatctctttgaggaagctgagaaactaaccaaagacatt
acagaaaagatgtctcaagtagaagtaaaattagctgacacagcttcacaaaacaatagc
acagctggggaactggacctccttcaggcagaagcaaacagcctggacaagactgtcagt
gaactttctgaacaactagagtttatcaaaaactcagatattcgaggtgctttggacagt
attaccaagtacttccagatgtctcttgaggctgaagaaagggtgaatgccaccaccacg
gatcccaacaacactgtggaccagtcggcttccatgcgagaaagagtggaagatttgctg
atggagcaagagtcccagttcaaggaaaagcaagaagaacaggccagccttcttgacgaa
ctggcaggcaaattgcaaagtctagatctttcagctgctgctgaaatgacctgtggaacg
cctccaggggaagactgttcccagactgagtgtggaggcccaaactgcagaacagatgaa
ggacagaagaaatgtgggggccctggctgtggtggtctagtgactgtggcccacaatgcc
tggcagaaagccatggactttgaccgagatgtcctgagcgcactggctgaagtggaacag
ctttccaagatggtctctgaagcgaagctgagggcagatgaagcaaaacagaatgctcag
gatgttctgttgaaaacaaacaccaccaaagaaaaagtagacaagagcaacaaggacctg
agaaatctgatcaagcaaatcagagactttctgaccgaggatggtgctgatttggacagc
attgaagcagttgctaatgaagtactgaaaatggaaatgcctagcaccccagagcagtta
caaagcttgacagaagacatccgtggacgagtggaaagcctttctcaagtagaagttatt
ctacagcagagtgctgctgatattgccagagctgagacgttgttggaagaagctaaaaga
gccagcaaaagtgcaacagatgttaaagttactgcagacatggtaaaggaagctctggaa
gaagcagagaaggcccaggtggcagcagagaaggcaatcaaacaagccgacgaggatatc
caaggaacccagaccctgctgacctcgattgaatctgaaacagtagcttctgaagaaact
ttgttcaacgcctcccagcgcatcagtgagctagagaggaatgtagaggaacttaagcgg
aaggctactcagaactctggggaggccgaatatattgaaaaagtagtatacactgtgaaa
caaaatgcagacgatgttaagaagactctggatggtgaacttgatgaaaagtataaaaag
gtagaaagtttaattgccaaaaaaactgaagagtcagctgatgccagaaggaaagctgaa
atgctacaaaacgaagcaaaaacacttttggctcaagcaaatagcaaactgcaactactc
aaagatttagaaagaaaatatgaagataatcaaaaatatttagaagataaagctcaagaa
ttagttaggttagaaggagaagtccgttccctccttcaggatataagtgagaaagttact
atatacagcacctgcttgtaa
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integrated database retrieval system