Dipodomys spectabilis (banner-tailed kangaroo rat): 122112014
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Entry
122112014 CDS
T07891
Symbol
Apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122112014 (Apex2)
Enzymes [BR:
dsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122112014 (Apex2)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122112014 (Apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
122112014
NCBI-ProteinID:
XP_042540767
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All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MLRLISWNINGIRSPQQGALCQEARNSAMTTKRILDELDADIVCFQETKVTRDVLTEPLA
IVEGYNSYFSFSRSRSGYSGVATFCKNSAAPVAAEEGLSGLFATQNGNVGCYGNMDEFTP
EELRALDSEGRALLTKHKICTLEGKEKTLTLINVYCPHADPGKPERLTFKLRFYRLLQIR
AEALLAAGSHVIILGDLNTAHRPIDHCDAANLECFEEDPGRKWMDGLLSNPEGQAGSQVG
PPFIDSFRYFQPKQERAFTCWSVVSGARHLNYGTRIDYVLGDRTLVMDTFQTSFLLPKVM
GSDHCPVGAALNVSSVPAKQCPPLCTRFLPEFAGTQLKILHFLVPLEQEPVLEQSVMQPS
NQIQVQKRPKKAPVCSTKPWPDQANSRRKQKDLMSYFQPSSSHPQTSDLNLPHLPVMAPH
VTPETSEEEVMAKVVEEQAKAKDEKEVRTLFWKTVLGGPSPVPLCGGHKEPCVMRTVKKS
GPNLGRHFYMCARPQGPPSDPSSRCNFFLWRKPS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtttaataagctggaatatcaatggtatccgaagcccccagcaaggggcgtta
tgccaggaagcacgcaacagtgccatgaccacaaaacgtattttggatgagctggatgcg
gatatcgtctgtttccaagagaccaaagtgaccagggatgtactgacagagccattggct
atcgtcgagggctataactcctatttcagcttcagccgcagccgtagtggctattctggt
gtagctaccttctgtaagaatagtgctgctcctgtggctgctgaagaaggcctcagtggt
ttgtttgccacccagaatggaaatgtaggttgctacggaaacatggatgagttcacccca
gaagagctccgggctttggatagtgagggcagggccctccttacaaagcacaagatctgc
acactggaagggaaggagaagactttgacactaatcaatgtatactgcccccatgccgac
cctgggaagcctgagcgactgacctttaagctacggttctatcgactgctgcagattcga
gcagaagcccttctggcagctggcagccatgtgatcattctgggggacctgaatacagct
catcgccccattgaccactgtgatgcagccaatctggagtgctttgaagaagatccaggg
cgcaagtggatggatggcttgctcagtaacccagagggccaggctgggtcccaagtaggg
cctcccttcattgatagcttccgctatttccaaccaaagcaggaaagggccttcacctgc
tggtcagtggtcagtggtgcccgccatctcaactatggcacccggattgactatgtgctg
ggagacaggaccttggtcatggataccttccagacttccttcctgcttcctaaagtgatg
ggctctgaccactgccctgttggtgctgccttgaatgtgtcctctgtgcctgcaaaacag
tgtccacctctatgcactcgcttcctcccagagtttgcaggcacccagctcaagattctc
cactttctagttcctcttgagcaagaacctgtgctagagcaatcagtaatgcagcctagc
aatcaaatccaggtgcagaaacgaccaaaaaaagcccctgtgtgctcgaccaagccttgg
ccagatcaggctaactccagaagaaagcagaaagacctaatgagctacttccagccttcc
tcaagccatccccaaacttctgatttgaatctacctcacctgcctgtcatggcacctcat
gtgactccagagacttctgaagaagaggtgatggccaaagtggtagaagaacaggccaag
gctaaagatgagaaggaggtacgaaccttgttctggaagactgtgctggggggaccttct
cctgtgcccctctgtggaggccacaaggagccatgtgtgatgcgtactgtaaagaagtca
ggacccaacctgggccgccatttctacatgtgtgccagaccccagggtcctcccagtgac
ccctcatcccgctgcaacttcttcctctggagaaaacccagctga
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