Dipodomys spectabilis (banner-tailed kangaroo rat): 122112535
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Entry
122112535 CDS
T07891
Symbol
Exosc8
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122112535 (Exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122112535 (Exosc8)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122112535 (Exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122112535
NCBI-ProteinID:
XP_042541290
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
MYAIPGASCCGFIFRHINVGIILTRFRTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNI
GSISTADGSALVKLGNTTVICGVKAEFAAPPTDAPDKGYVVPNVDLPPLCSSRFRAGPPG
EEAQVASQFIADVIENSQIIQKEDLCISPGKLAWVLYCDIICLDYDGNILDACTFALLAA
LKNVQLPEVTINEETALAQVNLKKKNYLNVRTHPVATSFAVFDDTLLIVDPTGEEERLAT
GTLTVVMDEESKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDEVIKSMKPK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtatgccatacccggtgctagttgttgtgggtttatatttaggcacattaatgtcggt
atcattttaacacgtttcaggaccgtggaaccgctggagtattacaggcgatttctcaaa
gaaaactgccgtcctgatggaagggaactgggtgaatttagaaccacaacagtcaacata
ggttcaatttctacagccgatggttctgctttagtcaagctgggaaatacaacagtaatt
tgtggagttaaagcggaatttgcagcaccaccaacagatgcccctgataaaggttatgtt
gtccctaatgtggatctaccacccctgtgttcatcacgatttcgggccggacctccagga
gaagaggcccaagtggctagccagttcattgcagatgttattgaaaattcacagataatt
cagaaagaagacttgtgcatttctccaggaaagcttgcttgggtactatactgtgatatt
atctgccttgactatgacgggaacattctggatgcctgtacatttgccttgttagcggct
ctaaaaaatgtacagctgcctgaagttactataaatgaagaaactgctttagcacaagtt
aatttaaagaagaaaaattatttgaatgttagaacacatccagttgcaacttcctttgct
gtgtttgatgacactttgctaatagttgaccctactggagaagaagaacgtctggcaaca
ggaactttaacggtagtaatggatgaagaaagcaagctctgttgtcttcacaaaccaggt
ggaagtggactgactggagctaaacttcaggactgtatgagccgtgctgttacaagacac
aaagaagtgaaaaaactaatggatgaagtaattaagagtatgaagcccaaataa
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