Dipodomys spectabilis (banner-tailed kangaroo rat): 122112569
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Entry
122112569 CDS
T07891
Symbol
Dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122112569 (Dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122112569 (Dhx36)
03012 Translation factors [BR:
dsp03012
]
122112569 (Dhx36)
Enzymes [BR:
dsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122112569 (Dhx36)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122112569 (Dhx36)
Translation factors [BR:
dsp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122112569 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
PhoH
DUF6782
AAA_23
ResIII
Motif
Other DBs
NCBI-GeneID:
122112569
NCBI-ProteinID:
XP_042541352
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MRTRQERNEFTAVDPAPRHGLGEVGTDCPAPPSPASRAGPTGPDGLRPAQRPPRRRSHEH
RIPDRFRPRRVTSPESAQVTPSGPAPLRWAPEARRKWPRTRFRAQTPFPAAAAASHSLRR
AGTMSFDYHQSWGREGGTRGSGGGHGGGRGPGGGRGGGGRGGRGPHPGHLKGREIGLWYA
KKQMQRNREAERQERAVVHMDERREEQIVQLLNSVQAKSDKDPEAQISWFAPEDHGYGAE
VSAEKKTNSEKKVDKQEKKLMSQEKKILRIRDKSIFERDSEYLLQENEPDATLDQKLLED
LQKKKSDARYIEMQRFREKLPSYGMQKELVTLIDKHQVTVISGETGCGKTTQVTQFILDS
YIERGMGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSI
LYCTTGIILQWLQSDSLLSSVSHIVLDEIHERNLQSDVLMTVVKDVLNYRSDLKVILMSA
TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQFKRGFLQGHV
NRREKEEKEAIYKERWPDYIRELRGRYSPSTISVLEMMDDDKVDLNLIAALIRHIVLKEE
DGAILVFLPGWDNISSLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKI
VIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQ
PGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSSEAV
LLSVKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF
KDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLS
SNTLQMLHDMKGQFAEHLLGAGFVSSRSPKDPKSNINSDNEKIIKAVICAGLYPKVAKIR
LNLGKKRKMVKVHTKSDGLVAIHPKSVNVEQTDFRYNWLMYHLKMRTSSIYLYDCTEVSP
YCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIANLVKELRKELDMLLQEKIENPHPV
DWKDKASRDCAVLSAILDLIKTQEKAVPRSLPPRHQDGWSS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgaggcaggagaggaacgagttcaccgccgtggaccccgcgccgaggcacggc
ctcggtgaagttggtaccgactgccctgcgccgccgagtcccgcgtcccgcgccggaccc
acaggccccgacggtctgcgcccagcccagcgccctccccgaaggagaagccacgagcac
cgcattccggaccgcttccgtccccggcgtgtgacgtcaccggaaagcgcgcaggtgacg
ccaagcggacccgcccccttgcgctgggcgccggaagcgaggcggaagtggccgcgcacc
cgcttccgggcccagacgccatttccagcggcggcggcggcttctcacagcttgcggcgc
gcggggaccatgagcttcgactaccaccagagctggggccgcgaagggggtacccgcggc
tcgggcggcggccacggaggcggccgcggcccgggcggagggcggggcggcggcgggaga
ggcggccgcggcccgcaccccgggcacctgaaaggccgcgagatcggcctgtggtacgcg
aagaagcagatgcagaggaaccgggaagccgagcggcaggagagagctgtagtgcatatg
gatgaaagacgagaagagcaaatcgtgcagctgctgaactctgtccaagctaagagtgat
aaagaccctgaagctcagatttcctggtttgctcctgaggatcatggatatggtgctgaa
gtttctgctgagaaaaaaacaaactcagagaagaaagttgacaaacaggaaaagaaattg
atgagccaagaaaaaaagatacttagaattagggataaatccatctttgaacgagattct
gagtatcttttgcaagaaaatgaaccagatgcaaccttagaccaaaaattactggaagat
ttacaaaagaagaaaagtgacgctcggtatattgagatgcagcgtttcagagaaaagctg
ccttcctatggaatgcagaaggagttggtgactttgattgataagcatcaggtaaccgtg
ataagtggtgaaactggttgtggcaaaaccacccaggtcactcagttcatcttggacagc
tacattgagcggggcatgggctctgcgtgcaggattgtctgtacccagccacggaggatc
agcgccatctctgttgcagagcgagtggctgctgagagggcagagtcctgtggcaatggt
aatagcactggataccagattcgtctccagagtcggttgccgagaaagcagggttccatc
ttgtattgtaccacaggaatcatcctgcagtggctccagtcagactcgcttttgtccagt
gttagtcatattgtacttgatgaaattcatgaaagaaatctgcagtcagacgttttaatg
actgttgttaaagacgttcttaattaccgatctgacctaaaagtcattttgatgagtgca
acattgaatgctgagaagttctcagaatattttggaaactgtccaatgatacacattcct
ggtttcactttcccggttgtggaataccttctggaggatatcattgaaaaaataagatat
gtgccagagcagaaagagcacagatcccagtttaagaggggtttcctgcaaggccatgta
aatagaagagaaaaagaagaaaaggaagcaatctataaggagcgctggccagactatata
cgagaactgagaggaaggtattctccaagtactatcagtgttttggaaatgatggatgat
gataaagttgatctgaatttgattgctgctctgattcgacacattgttttgaaagaagag
gatggagcgattctagtcttcctgcctggctgggacaacatcagcagtctacatgatctc
ctgatgtcccaggtgatgtttaagtcagataagtttcttattatccctctacattcacta
atgccaacggtaaaccagacacaggtgtttaaaagaactcctcctggtgttcggaaaata
gtaattgctaccaatattgcagagactagcatcaccattgatgacgtagtgtatgtgata
gatggaggaaaaattaaagaaacacattttgacactcagaacaacatcagcacgatggct
gccgagtgggtcagtaaagcaaatgccaaacagaggaaaggccgcgctggcagagtccag
cctggtcactgctatcatctgtataatggccttagagccagtcttctagatgactatcag
ctgccagagattctaagaacgcccctggaagaactttgtttgcaaataaagatcttaagg
cttggtggaattgctcattttctgagtcggttaatggaccctccgtccagcgaggcagtg
ctgctctccgtaaaacacctcatggagctgaatgctttggacaaacaggaagaattgacc
cctcttggtgtccacttggcccgattgccagttgagccacacatcgggaagatgattctc
ttcggagctcttttctgttgtttagacccagtgctcactattgcggctagtctcagcttc
aaagatcccttcgtgattccattggggaaagaaaagattgcagatgctagaagaaaggaa
ctggcaaaggaaactagaagtgatcacctgacagttgtaaatgcatttgagggctgggaa
gaagctaggcggcgtgggttcagatatgaaaaggattactgctgggaatatttcctctct
tcaaacacactgcagatgctgcatgacatgaaagggcagtttgctgagcacctgcttgga
gctgggtttgtaagcagcaggagccccaaagaccccaaatccaatataaactcagataat
gagaagataatcaaagctgtcatctgtgctggcttatatcccaaagttgctaaaattcga
ctaaatctgggtaaaaaaagaaaaatggtgaaagttcataccaagtctgatggtctggtt
gcgattcaccccaaatcagtgaacgtggagcagaccgatttccgctacaactggctcatg
taccacctcaagatgaggacgagcagtatctacttgtatgactgcaccgaggtctccccg
tactgcctcttgttcttcggtggcgacatctccatccagaaggacaacgaccaggaaacc
attgctgtggacgaatggattgtgttccagtccccagccagaattgccaaccttgtgaag
gagttaaggaaggaactggacatgctgctgcaggagaagatagagaaccctcaccctgtg
gactggaaggacaaggcatccagagactgtgctgtgctctctgctattctggacttaatc
aaaacccaggagaaggcggttccccggagcctgcctccccgccatcaggacggatggagc
agctga
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integrated database retrieval system
