KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122112588
Entry
122112588         CDS       T07891                                 
Symbol
Rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03030  DNA replication
dsp03410  Base excision repair
dsp03420  Nucleotide excision repair
dsp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122112588 (Rfc3)
   03410 Base excision repair
    122112588 (Rfc3)
   03420 Nucleotide excision repair
    122112588 (Rfc3)
   03430 Mismatch repair
    122112588 (Rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dsp03032]
    122112588 (Rfc3)
   03036 Chromosome and associated proteins [BR:dsp03036]
    122112588 (Rfc3)
   03400 DNA repair and recombination proteins [BR:dsp03400]
    122112588 (Rfc3)
DNA replication proteins [BR:dsp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122112588 (Rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    122112588 (Rfc3)
Chromosome and associated proteins [BR:dsp03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122112588 (Rfc3)
DNA repair and recombination proteins [BR:dsp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122112588 (Rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    122112588 (Rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 ABC_tran AAA_2 zf-HC2 AAA_11
Other DBs
NCBI-GeneID: 122112588
NCBI-ProteinID: XP_042541381
LinkDB
Position
Unknown
AA seq 356 aa
MSLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY
GVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ
LETNTQRDFKVVLLTEVDKLTRDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL
AVRVPAPSIEDICLVLTTVCKKEGLTLPPQLAHRLAEKSCRNLRKALLMCEACRVQQYPF
TEDQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLLELL
HNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEGMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcctctgggtggacaaataccggccgtgctccttaggacggctcgactatcacaag
gagcaggcggcgcagctgcggaacctggttcagtgtggtgacttccctcatctgttagtg
tatggaccatcaggtgctggaaaaaaaacaagaattatgtgtattctacgtgaactttat
ggtgttggggtagaaaaattgaggattgaacatcagaccatcacaacaccatctaaaaag
aaaattgaaatcagcactattgcaagtaattaccaccttgaagttaatcccagtgatgct
ggaaatagtgaccgggtagttattcaggagatgttgaaaacagtggcacagtcgcagcag
cttgaaacaaacactcaaagagattttaaagtggtgttactgacagaagttgacaaactt
accagagatgctcaacatgccttgaggagaaccatggaaaagtacatgtccacctgcaga
ttgatcttgtgttgcaattctacatccaaagtcataccacctattcgtagtcggtgcctg
gcagttcgtgtgcctgcacccagcatcgaagatatttgccttgtgttaacaactgtatgc
aaaaaggaaggtctgactctcccgccacagctggctcacagactggcagaaaagtcctgc
agaaacctcaggaaagccctgcttatgtgtgaagcctgtagggtacaacaatatcctttt
actgaagatcaagaaatccctgaaacagactgggaggtttatctgagagagactgcaaat
gctattgtcagtcagcagacaccacaaaggctccttgaagttcgtggaaggctttatgag
cttctaactcattgtattcctcctgagataataatgaagggccttctcttggaactttta
cataattgtgatggacagctgaaaggggaagtggcccaaatggcagcttactatgaacac
cggctgcagctggggagcaaagccatttatcacctggaagcctttgtagccaagtttatg
gcactttataagaagttcatggaggatggattggaaggcatgatgttctga

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