Dipodomys spectabilis (banner-tailed kangaroo rat): 122112718
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Entry
122112718 CDS
T07891
Symbol
Ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dsp03037
]
122112718 (Ift88)
Cilium and associated proteins [BR:
dsp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
122112718 (Ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_7
TPR_8
TPR_6
TPR_19
TPR_14
TPR_16
TPR_11
ANAPC3
TPR_17
TPR_10
ARM_TT21_4th
TPR_CcmH_CycH
ARM_TT21_5th
TPR-S
TPR_15
ARM_TT21_N
TPR_21
HAT_PRP39_C
HEAT_Nup120
ARM_TT21_C
DUF6584
Motif
Other DBs
NCBI-GeneID:
122112718
NCBI-ProteinID:
XP_042541557
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPTYDTEELENDTGFQQAVRTSHGRRPPSKTSLASSL
GRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSRGPAPPLEAKNEDSPEEKIR
QLEKKVNELVEESCIANSCGDLKLALEKAKDAGRMERVLVRQREQVTTPENINLDLTYSV
LFNLASQYSANEMYTEALNTYQVIVKNKMFSNAGILKVNMGNIYLKQRNYSKAIKFYRMA
LDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMAPNLKAGYNLILSYFAIG
DREKMKKAFQKLIAVPLEIDEDEKYISPSDDPHTNLLIEAIKNDHLRQMERERKAMAEKY
IMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEINKAITYLRQRDFNQSVDTL
KMLEKKDSRVKSAAATNLSGLYFLQNEFSQASSYADLAVNSDRYNPSALTNKGNTVSANG
DHEKAAEFYKEALRNDSSCTEALYNLGLTYKKLNRLDEALDCFLKLQAILRNDAQVLYQI
ANVHELMKDPSQAIEWLMQLISVVPTDSKVLAKLGELYDSEGDKSQAFQYYYESYRYFPS
NIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMIASCFRRSGNYQKALDTYK
DIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKKLEKMKEIKEQRIKSGRDGSGGSR
SKWEGSAGNDSGQNSSANSKGERLSAKLRTLPGTNEPYESSSNKEIDASYVDPLGPQIER
PKTAAKKRGDEDDFADEELGDDLLPE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcacctggcaccagagacagatgaagatgatctgtattctggttat
aatgactacaacccaacctatgatactgaggaattggaaaatgatacaggttttcagcaa
gcagtgagaactagtcatggcagaagacctccttccaagacatccctggcatcatccttg
ggaagaccaatgacaggggctattcaggatggagttactcgacctatgacagcagtgaga
gcagctggttttaccaaagcagcactgagaggctctgcatttgatccccttggtcagtca
cggggaccagctcctcccttggaagccaagaacgaagatagtccagaagaaaagattaga
caattagagaaaaaagtaaatgagttggtagaagaaagctgtattgcgaatagttgtgga
gacttaaaattggccttagaaaaagcgaaagatgcaggaagaatggaaagagtgttagtg
agacaacgagaacaagttacaactccagagaatatcaatctggatttaacttactcagtt
cttttcaacttggccagtcagtattcagctaatgaaatgtatactgaagcattaaacaca
tatcaagttatagtgaaaaataagatgttcagcaatgcaggaatattgaaggtgaatatg
ggaaatatttatttaaagcaaagaaattactccaaagctattaagttctaccgaatggct
ttagatcaaatcccaagtgtccataaagaaatgaggataaaaataatgcagaacattggc
gttacatttattaaaacgggtcagtattcagatgccattaattcattcgaacacataatg
agcatggcgccaaatctgaaggcaggctacaacttaatcctcagttattttgccatcgga
gatcgagaaaaaatgaagaaggcattccagaaattgattgctgtaccattagaaatcgat
gaagatgagaaatacatttcaccaagtgatgatccacatactaacttactgattgaagct
ataaaaaatgatcatctcaggcaaatggaacgtgagaggaaagccatggcagaaaaatat
atcatgacagctgcaaaactcattgcacctgtaattgagacatcttttgctgtaggttat
gactggtgtgtggaagtagtgaaagcttctcaatatgtagagctagccaatgatctggaa
ataaacaaagcaattacatacttaaggcaaagggattttaaccaatctgtagatacctta
aaaatgttggaaaaaaaagacagtagagtgaaaagtgcagctgcaactaacctctcaggc
ctgtattttctgcaaaatgaattttcccaagcaagcagctatgcagatttagctgtgaac
tctgacagatataacccatcagctctgactaataaagggaatacagtttctgcaaatggt
gatcatgagaaggctgctgaattctataaagaggctctaagaaatgattcttcttgtact
gaagcactttacaaccttggccttacctataagaagctaaaccggctagatgaggctttg
gactgtttcctgaaacttcaagcaatcttgagaaacgatgcccaagttctttaccaaata
gcaaatgtacatgaattaatgaaagatccgagtcaagctattgaatggttgatgcagctg
atcagtgttgttccaacagattctaaagttctagccaagctgggagaattgtatgatagt
gaaggagacaagtcacaagcgttccaatattactatgagtcgtacaggtatttcccttct
aacattgaagtcattgagtggcttggagcatattatattgacactcagttttgtgaaaaa
gccattcagtactttgaaagagcttctcttatacagcctacacaagtgaaatggcagctg
atgattgctagttgtttcagaagaagtggtaactaccagaaagcattagatacttacaaa
gatattcacagaaaatttccagaaaatgttgaatgtctgcgtttcttggttcgtctctgc
acagatattggattaaaagaggttcaagaatatgccacaaaactcaagaagttggaaaaa
atgaaagaaataaaggaacagcgcatcaagtctggcagagatggcagtgggggctcccga
agcaaatgggaggggagcgctggcaatgatagtggccagaacagtagtgccaatagtaaa
ggtgaacgactaagtgccaaactcagaactttacccgggacaaatgaaccttatgaaagt
agcagtaacaaagaaatagatgcttcctatgtggatccacttggcccacagatagaaaga
ccaaaaactgctgccaagaaaagaggcgatgaggatgattttgctgatgaagagctagga
gatgatttgcttccagaataa
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