Dipodomys spectabilis (banner-tailed kangaroo rat): 122112908
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Entry
122112908 CDS
T07891
Symbol
Frem2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122112908 (Frem2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
dsp04091
]
122112908 (Frem2)
Lectins [BR:
dsp04091
]
C-Type lectins
Lecticans
122112908 (Frem2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
zf-XS
Motif
Other DBs
NCBI-GeneID:
122112908
NCBI-ProteinID:
XP_042541791
LinkDB
All DBs
Position
Unknown
AA seq
3172 aa
AA seq
DB search
MPATGTPAIAPRARRAADPTGFRPTPAAPPWLPLLLLSLGSLLSAQPAAPGGAALLSPGL
SGAAGVPAEEAIVLVNRGLRVPFGREVWLDPLHDLVLQVQPGDRCWVTVLDNDALAQRPG
RLGPKRFPCDFGPGEVRYSHLGARSPSRDRVRLQLRYDAPGGTVVLPLALEVEVVFTQLE
VVTRNLPLVVEELLGTSNALDARTLEFAYQPEKEECRVGIRPGLGALPRYGELLHYPQIP
GGTRGGDPEPLLMDCRAFQELGVRYRHTASSNSPNRDWVPMVVELRSRGAPVGSPALKRE
HFQVLVRIRGGAENTAPKPSFVAMMMMEVDQFVLTALTLDMLAAEDAESPPDLLIFNLTS
PFQPGQGYLVSTDDRSLPLSSFTQRDLRLLKIAYQPPSEDSDEERLFELELEVVDPEGAA
SDPFAFMVVVKPMNTLAPVVTRNTGLILYEGQSRPLAGPAGGGGLQNLVISDEDDLEAVR
LEVVAGLRHGHLFILGAPSGSSAPKTFTVAELAAGQVVYQHDDKDGSLSDNLVLRMVDGG
GRHQVQFLFPITLVPVDDQPPVLNANTGLTLAEGDTVPIPPLALSATDMDSDDSLLRFVL
ESPFPTMGHLLLRQSHSPGEEPELTRGPWRKQGAFYERRVTEWQQQDITQGRLFYRHSGP
HSPGSVMDQFTFRVQDNHDPPNQSGLQKFMIRIHPVDRLPPELGSGCPLRMVVQESQLTP
LRKKWLRYTDVDTDDRELRYTVTQPPVDTDENHAPAPLGTLVLTDNPSVVVTHFTQAQVN
HHKIAYRPPSQELGVAARVAQFQFQVEDRAGNVAPGTFTLYLQPVDNQPPEILNTGFTIQ
EKGLHVLTETELHVKDVDTDVGHISFTLTEEPKHGHMRVSGQTLHVGEIFYVEDIKQGRI
SYLHSGDKSLADSCSLEVSDRHHVVPITLRVNVRPVEHEAPMLTLPAGKIESYLDVLENE
ATEVTANVIKGTDEYTDDLMLTFLLEDPPLYGEVLVNGAPAEHFTQKDILEGSVVYTHTS
GEIGQLPRADSFNLSLSDTSQEWTVGGNTIQGVTVWVTILPVDNQAPEISVGEQFIVLEG
DKGVITSMHISAEDIDSPNDDLLCTIVIQPTSGYVENISPAPGSEKSRAGIAISAFTLKD
LRQGHINYIQSVHKGVEPVEDRFVFRCSDGINFSERQFFPIVIIPTNDEQPELFMREFMV
MEGMSLVIDTPILNAADADIPPDELTFVITQFPAHGHIMSQLINGTVLVESFTLDQIIES
SSIIYEHDDSETQEDSFVIKLTDGKYSVEKVVLIMVIPVDDETPRMTINNGLEIEIGETQ
TINNKILMATDLDSEDKSLVYIIRYGPGHGFLQRQKPTGVFENITLGMNFTQDEVDRNVI
QYVHVGQEGIRDLIKFDVTDGINALIDRYFYISIGSVDMVFPDVVSKGVSLKEGGKVTLT
TDLLSTSDLNSPDENLVFTITRAPMRGHLECTDQLGISITSFTQLQLAGNKIYYIHTAED
EVKMDSFEFQVTDGRNPVFRTFRISISDVDNKKPVVTIHSLVVTESESKLITPFELTVED
RDTPDQLLKFTITQIPVHGHLLFNHTKPVMVFTKQDLNENLISYKHDGTESSEDSFSFTV
TDGTHTDFYVFPDTVFETRRPQMMKIQILAVDNNIPQITVNKGASMLRILTTGHLGFMIT
NKILKVEDRDSLHFSLRFIVTKAPQHGYLLNLGKGNHSITHFTQADIDDMKICYVLREGA
NATSDMFRFAVEDGGGNRLTNQHFRLNWAWISFEKEYYLVNEDSKFLDVILKRRGYLGET
SFISIGTRDGTAVKDKDFKGKAQKQVQFNPGQTRATWRVRILSDGTHEQSETFQVILSEP
VLAALEFPAVTTVEIVDPGDESTVFIPQSEYSIEEDVGELLIPLQRTGDVSQELMVICYT
EQGTATGTVPTSVLSYSDYISRPEDHTSVIRFDREEREKACRIIVIDDSLYEEEESFQVR
LSMPMGGKMGSEFPGARVTILPDKDDEPIFYFGDVQYSVDESAGYVEVQVWRTGTDLSRP
SSITVRSQKTDPPSADAGTDYVGISRNLDFAPGVNMQRVRIIIVDDLGQPVLEGVEKFEL
VLRMPVNAALGEPSKATVYINDSVSDLPKMQFKERVHTGSEKDGQIVAGIRRSGDVQFTS
SVRCYTRQGSAQVMMDFEERPNTDISTITFLPGETEKPCILELMDDTVYEEVEELRLVLG
SPQSSSPFGAAVGEQNETLIRIQDDADKSIIKFGETKFSVTEPKESRESVVVRIPVIRQG
DTSKVSIVRVHTKDGSATSGEDYHPVSEEIEFKEGETQHVVEIEVLFDGVREMREAFTVH
LKPDENMVAETQVTKAIVYIEEINNMADVTFPSVPQIVSLLIYDDTSKAKEGTGPASGYP
VVCVTACNPKYSDYDKTGSICASENINDTLTRYRWLISAPAGPDGVTSPMREVDFDTFFT
SSKIITLDSIYFQPGSRVQCAARAVNMDGNEGLELMSPIITIGREEGLCQPRVPGVVGAE
PFSAKLRYTGPEDSDFANLIKLTVTMPHIDGMLPVISTRELSNFELILSPDGTRVGNHKC
SNLLDYTEVKTHHGFLTEATKNPEVIGETYPYQYSSPIRGSNTLRFYRNLNLEACLWEFV
SYYDMSELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLKSEL
RLTFVYDTAILWNDGIGSPPEAELQGSLYPTSMRIGEEGRLAVNFKTEAQFHGLFVLSHP
ASFTSSMIMSADHPGLTFSLRLIRSEPTYNQPVQQWSFVSDFAVRDYSGTYTVKLVPCTT
PSNQEYHLPVTCNPREPVTFDLDIRFQQVSDPVAAEFSLNTHMYLLSKKSLWLSDGSMGF
GQESDVAFAEGDVIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYSPANEEYGCL
ADSPSLLYRFKIVDKAQPETQATSFGNVLFNAKLAVDDPEAILLVNQPGSDGFKVDSTPL
FQVTLGREWYLHTIYTVRSKDNTLRGIGKRSVEYQYHSLVRHADSQATSTSRKKREIRST
PSLAWEIGAENNRGTNIQHITLDRSTKRQIPQGRVPPDGILPREFNNPGSDISLITALGG
IAVGLLTVCLSIIAAMVCRRKKSIRAKDAAKGSGSSEPMMSPQNHHGDSSEV
NT seq
9519 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaccgggactcccgcgatcgccccccgcgcgcgccgcgccgcggaccccacg
ggctttcggccgacacctgcggcgccgccctggctgccgctgcttctcctgtcactggga
agcctcctctccgcccagcccgcggcccccggcggcgcagccctgctgtccccgggtctc
tcgggggctgctggggtcccggcggaggaagccatcgtgttggtgaaccgcggactccgg
gtacctttcggacgggaagtgtggctggacccgctgcacgatctcgtgttgcaggtgcag
cctggggaccgctgctgggtgaccgtgctggacaacgacgcgctggcccagcggcccggc
cgcctgggtcccaagcgcttcccgtgcgacttcggccccggggaggtgcgttattctcac
ctgggcgcgcgcagcccatcccgggaccgagtccggctgcagctgcgttatgacgctccc
ggagggaccgtcgtgctacctctagccctggaggtggaagtggtcttcacccagctggag
gtggtgactcgaaacttgcccctggtcgtggaagaactattggggaccagcaacgccctg
gatgcacgcactttggagttcgcctaccagcccgagaaggaggagtgtcgcgtgggcatc
cggccgggcttgggtgcgctgcctcgctatggagaactcctccactacccgcagatcccg
ggaggaacccgaggaggcgaccccgagcctctgttgatggactgcagagcgtttcaggag
ttaggcgtccgttaccgccacacagcttccagcaactcgccaaaccgggactgggtaccc
atggtggtggagctgcgttcccggggagctccggtaggaagtcctgctttaaaacgcgag
cacttccaggtgctggtgaggatccgaggaggagctgagaacaccgcccccaaacccagt
tttgtggccatgatgatgatggaggtggaccagttcgtcctgaccgccctgactctggac
atgctggcggctgaagacgctgagtctccgcctgacctgctgatctttaaccttacctct
cccttccagcctgggcagggctacttggtgagcacggatgaccgcagcctgcccctctct
tccttcactcagagggacctgcgccttctgaaaattgcctaccagcccccttctgaagac
tcagatgaggagcgtctctttgagttggaactggaggtggtggatccagagggagcagcc
tctgatccttttgccttcatggtagtggtgaaacccatgaacacgctggccccagtggtc
acccggaacactggtcttattctctatgaaggtcagtctcggcccctcgcgggtcctgca
ggcggtggtggactgcagaacttggtcatcagtgatgaggatgatctggaagcagtacgg
ctggaggtggtggctggactccggcatggtcacctcttcattctgggggctcccagtggt
agctctgctcccaagaccttcacagtggcagagctggcagctggccaggtggtctaccaa
catgatgacaaagatggctcgctgagtgacaacctggtcctccgcatggtggatggagga
ggcagacaccaggtccagttcctgtttcccatcaccttagtgcctgtggatgaccagcca
cctgtcctcaatgccaacacggggctgacactggcagagggggacacggtgcccatccca
ccccttgctctgagtgccacggacatggattcagatgactcactgcttcgttttgtgttg
gagtctccctttcccaccatggggcatcttcttcttcgccagagtcactctcctggggag
gagccagagctgaccaggggcccgtggaggaagcagggagcattttatgaacgaagagtg
acagagtggcagcagcaggacataacccaagggaggttgttctacagacactctgggccc
cacagtcctggatcagtgatggaccagttcacatttcgagtccaggataaccacgaccct
ccgaatcaatctggacttcaaaagttcatgatacgcattcatccggtggatcggctccct
ccagagctgggtagcggctgtccccttcggatggtggtgcaggaatctcagctcacaccc
ctgaggaagaagtggctgcgttacactgatgtggacacagatgaccgagaacttcgttac
actgtgacccagccccccgtggacacagatgaaaaccatgcacctgcccctctgggtact
ttggtcctgactgataacccctcagtcgtggtaacccattttacgcaggcacaggtcaac
caccataaaattgcttacagacctccaagtcaagagctgggagtggctgctcgagtggcc
cagttccaattccaggtggaggaccgagctggaaatgtggctcctggcaccttcaccctt
tacttgcagcccgtggacaaccagccacctgagatcctaaacaccggcttcactattcag
gagaagggcctccacgtcctgaccgagactgagttgcacgtgaaggatgttgataccgat
gtgggccacatctctttcactctcacagaggaacccaaacatggccacatgcgagtgtct
ggacaaacactgcatgtaggagagatcttctatgtggaagacatcaaacaaggccggatt
tcctaccttcattccggggacaagtcgttggctgatagctgctccttggaggtgagtgac
agacaccacgtggtgccaattacgcttagagtgaatgttcgccccgtagaacatgaggcc
cccatgctgacccttcctgctgggaaaatagaatcttatctggatgtcttagaaaatgag
gctactgaagtcacggctaatgttattaaggggactgatgagtacacagatgatttgatg
ttgactttcctcttagaagacccacccttgtatggggaagtcctggtgaatggagctcca
gcagagcactttactcaaaaggacattttggagggctctgttgtctatacccacaccagt
ggtgagattggtcagttgcccagagcagactcttttaacctgagtctgtcagatacatct
caagaatggacagttggtggcaatactatccaaggtgttactgtgtgggtgaccatcctg
cctgtggataaccaggccccagaaatttcagtgggtgaacagtttatagtattggaaggt
gataaaggtgtgatcacctccatgcacatcagtgctgaagacattgattccccaaatgat
gacctcttatgtaccatagtgattcagccaacttcaggttacgtggagaacatttctcca
gccccaggctctgagaaatcaagagcagggattgccatcagtgccttcactctgaaagat
ctgaggcagggtcacattaactatattcagagtgtccataaaggggtggagcccgtggaa
gatcgatttgtattccgttgctctgatggcattaacttctcagagagacagtttttcccc
attgtcatcattcctaccaacgatgaacagccagaactgtttatgagagaatttatggta
atggaaggcatgagtctggtgatcgacacccccattctcaatgctgctgatgccgacatc
cctcctgatgagttaacttttgtcatcacccagtttcctgctcatggtcatatcatgagc
cagctgataaatggcactgtcttggtggaaagcttcaccctagaccaaatcatagaaagt
tccagcattatctatgagcatgatgactctgagacccaggaagacagttttgtgattaaa
ctcacagatggcaagtattctgtggaaaaggtggtcctcatcatggttattcctgtggat
gatgagacccccagaatgaccatcaataatggattggagatagaaattggggaaacccaa
acgatcaacaacaaaatactaatggccactgatttggactctgaagacaaatccttggtt
tatattatccgttatgggccaggacatggttttctccagcgacaaaaacctacaggtgtc
tttgaaaatatcacactgggcatgaattttacccaggatgaagtggacagaaatgtcatc
caatacgtccacgttgggcaggaaggcattcgggatctaattaaatttgatgtgactgat
ggaataaatgccctcatagatcgttacttttatatctccattgggagtgttgacatggtc
ttccctgacgtggtcagcaagggagtctccttaaaggaaggtggcaaggtcactctcaca
acagacctcctcagcaccagtgacctgaacagtcctgatgaaaacttggtctttaccatc
acccgggctcccatgagaggccacctagaatgcacagatcaacttggaatctccatcaca
tctttcactcagctccaactagctggtaacaaaatctactacatccacacagctgaggac
gaggtgaagatggacagctttgagtttcaagtcaccgatgggcgtaacccagtctttcgc
acattccgtatctccatcagtgatgtggacaacaaaaagccagtggttaccatccatagc
ttggtggtcactgaaagtgagagcaagctgatcactccctttgagctcactgtggaagac
agagatactccagaccaactcttgaaattcaccatcacccagatccctgttcatggtcat
ctcctcttcaaccataccaaacctgtcatggtgtttaccaagcaagacttgaacgagaac
ttaatcagctacaaacatgatggcacagagtcaagtgaagatagcttctctttcaccgtg
actgatggtactcatacagacttctatgtttttcctgatacagtatttgaaacaaggaga
ccccaaatgatgaagattcagatcttagctgttgacaataacatcccccaaattacagtc
aataaaggggcctctatgctccgcatcctgaccactggccacttggggttcatgatcaca
aacaaaatattgaaagtggaggacagagacagtctacacttttctcttagatttattgtg
accaaggcccctcaacatggatacctcctcaacctgggcaaaggcaaccacagcatcacc
cattttacccaagctgacattgatgacatgaaaatctgctacgttttacgagaaggagca
aatgccacaagtgacatgttccgttttgcagttgaagatggtgggggaaaccggttaacc
aaccagcattttcgtctgaattgggcatggatctcttttgaaaaggaatattatctggtc
aacgaagactccaaatttctagatgtcatccttaaacgcagaggttacttgggagaaact
tcatttataagtattggcacgagagatgggactgcggtgaaagacaaagacttcaagggc
aaagctcaaaagcaagtgcaattcaacccgggccaaaccagggccacgtggagggtgcgg
atcctgagcgatggtacacatgagcagtcggagaccttccaggtgattctctcggaacca
gtgctggccgccctggagttccctgcggtgaccaccgtggagatcgtggaccccggagat
gagtcaactgtattcatccctcagtctgaatacagcattgaagaagatgtgggtgaattg
cttattcccctccagaggactggggatgtcagccaggagctgatggtgatctgctacaca
gagcaaggaacagcaactggaactgtgcctacttccgtgttgtcctactctgattacata
tccaggcctgaggaccacaccagtgtcattcgctttgacagagaggaacgggaaaaagca
tgtcgcatcattgttattgatgactccttgtacgaagaggaggagagcttccaggtccgg
ctgagcatgcccatgggtgggaaaatgggctcagagttcccaggagctcgggttaccatc
ctccctgacaaagatgatgaacccatcttctactttggtgatgtccagtactcagtggat
gagagcgcaggctacgtggaggtacaggtgtggaggacaggcaccgacctctccaggcca
tctagcatcacagtgagatctcagaaaactgatccaccctctgccgatgctggaactgac
tatgtgggaatcagccgtaatctggattttgcccctggagtgaacatgcagagagttcgg
attattattgtggacgaccttggacagcccgtgctggagggagttgagaagtttgagctg
gtacttcgtatgcctgtgaatgctgcccttggcgagcccagcaaagccaccgtgtacatc
aacgactctgtctctgacttgccaaagatgcaattcaaagaaagagtgcacactggcagt
gaaaaggatgggcagatcgttgcaggaatccgcaggagcggggatgtccagttcacgtct
tccgtgagatgctacaccaggcagggctctgcacaggtgatgatggacttcgaagaacgt
cccaacactgacatctccaccatcacattcctcccaggtgagacagaaaagccatgcatc
ctggaattgatggatgacacggtctatgaggaagtcgaggagttgcgcctggtacttggg
agtccacaaagcagctctccctttggggctgcagttggtgaacaaaatgaaaccctgata
aggatccaagatgatgctgataagtccattatcaaatttggagaaaccaaatttagtgtc
actgaacctaaagaatcaagagaatcagtggtggtcagaattcctgtgattcgccaagga
gatacttccaaggtttccatcgtgagggtccacaccaaagacggttctgccacctctgga
gaagactatcaccctgtgtccgaagaaattgagtttaaggaaggagaaacgcagcatgtt
gttgaaattgaagtattatttgatggggtcagagagatgagagaggccttcactgtacac
ttaaaacccgatgaaaacatggtagcagagacgcaggtcaccaaagccattgtgtacatt
gaagaaataaacaacatggcagatgtcacttttccttctgtccctcaaattgtgtccttg
ctaatatatgatgacacttccaaagctaaagagggcactggacctgcgtctggctatcct
gtcgtctgtgttacggcttgtaaccccaaatattctgactatgacaaaacagggtctatt
tgtgcaagcgagaacatcaatgacacgttgacccgctaccgatggctgatcagtgctcca
gctggccctgacggtgtgaccagccccatgagagaggtggacttcgacactttttttaca
tcctccaagataatcaccttagactccatatacttccagcctggatctcgagtgcagtgt
gcggctcgagctgtgaacatggatggcaatgaaggcttggagctgatgagcccaattata
acgattggcagagaagaaggcctttgtcaacctcgtgtgcctggagttgtgggggctgag
ccattctcagctaagttgcgatacacaggccctgaagactcagactttgcaaacctgatc
aaactcacagtcacgatgccacacattgacggcatgctccctgtgatctccactcgagag
ctctccaacttcgagctgatccttagccctgatgggacgagagttgggaaccacaagtgc
tccaacctcctggactacacagaggtgaagacccaccacggtttcctcacggaggccacc
aaaaaccccgaagtcatcggagagacctatccttaccagtacagctctcccatccgaggc
tccaacaccttacgcttctaccgaaacttgaacctggaggcctgcctgtgggagtttgtc
agctactatgacatgtcagagctcctcactgactgcggaggcaccatcgggactgatggc
caggtcctcaacttggtacagtcctatgtgacccttcgagttcctctgtatgtttcctac
gtgttccattccccagttggggttggaggctggcagcattttgacttgaagtcagagctt
cgtttgacttttgtgtacgacactgccatcttgtggaatgatggcattggcagcccacca
gaagctgaactccagggttctctctatccaaccagtatgcgcattggtgaagagggtcgt
ctggctgtgaacttcaagacagaggctcagttccatggcttgtttgtgctgtcacatcca
gcgtccttcacaagttcaatgatcatgtcagctgaccatccaggcctgaccttttccctc
cgcctcataaggagtgaaccaacctataaccagcctgtacagcaatggagctttgtctct
gactttgcagtacgtgactactcaggaacctacactgtgaagctggtgccgtgcaccaca
ccatccaatcaggagtaccacctgccagtcacctgcaaccccagagagcctgtcaccttt
gaccttgacattcgattccaacaggtcagtgatcccgtggcagcagaattcagcctgaac
acccacatgtacctgctctccaagaagagtctctggttgtcagatggctccatgggattt
gggcaagagagtgacgttgcttttgcagaaggggatgtaatttatggtcgtgtcatggta
gatcctgtccagaatctaggtgactccttttactgcagcattgagaaagtattcctgtgc
acgggagctgatggctacgtgcccaagtatagtccagcaaatgaagaatacggctgctta
gcagattccccttcgctcctctatagatttaaaattgtggacaaagcccagccagagaca
caagccaccagttttggaaatgtgctctttaatgctaaactggcagtagatgatcccgaa
gccattctcttagtgaatcagcctgggtccgatggatttaaagttgactcaacgccgctg
tttcaagtcactctgggccgagaatggtacctacacacaatctatacagtaagatcaaaa
gacaataccctccgagggattggcaaaaggagtgtggagtaccagtaccactcgctggtg
cgccatgcagattcccaggcaacttcaacgagcaggaagaagagagagatcagaagcaca
ccctcactggcctgggaaattggtgctgaaaacaaccgaggcacaaacatccagcatatc
accctggaccgcagcaccaagaggcaaatcccgcaagggagagttcctcctgatggcatc
cttccccgggagttcaacaatcctggctctgacatcagcttgatcactgccttgggcggc
attgcagtgggattactcaccgtgtgcctctccatcattgcagccatggtgtgccggagg
aagaagagcatcagagcaaaggatgctgccaagggctctggcagcagtgagcctatgatg
tccccacagaaccaccatggtgacagctcagaggtgtga
DBGET
integrated database retrieval system
