Dipodomys spectabilis (banner-tailed kangaroo rat): 122113055
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Entry
122113055 CDS
T07891
Symbol
Zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp05202
Transcriptional misregulation in cancer
dsp05206
MicroRNAs in cancer
dsp05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
122113055 (Zeb1)
05206 MicroRNAs in cancer
122113055 (Zeb1)
09162 Cancer: specific types
05215 Prostate cancer
122113055 (Zeb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsp03000
]
122113055 (Zeb1)
Transcription factors [BR:
dsp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
122113055 (Zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
122113055
NCBI-ProteinID:
XP_042541885
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVETNSDSDDEDKLHIVEEESITDAGDCEGGVPDD
DLPTDQTVLPGSSEREGSAKNCWEDDGKEGQGILGPEAQAGDAGCTVKDDECDSDAENEQ
NHDPNVEEFLQQQDTAVIYPEAPEEDQRQGTPEASGHDENGTPDAFSQLLTCPYCDRGYK
RFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSGGNRKF
KCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVNG
RPRTGLKTSQCSSPSLSASPGSPTRPQIRQKIENKPLQEQLSVNQIKTEPVDYEFKPIVV
ASGINCSTPIQNGVFSGGGPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAV
DGNVIRQVLENNQANLASKEQETINASSIQPGGHSVISAISLPLVDQDGTTKIIINYSLE
QPSQLQVVPQNLKKENPVPANSCKSEKLPEDLTVKTEKDKSFEGGVNDSTCLLCDDCPGD
LNALPELKHYDLKQPAQPPPLPAPEVEKPESSVSSGTGDGNLSPSQPPLKNLLSLLKAYY
ALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSEPSSPEPGKVNIPAKNDE
QHQSTNADEPQDSTISLQSPLKMSNSPGLPVGSTVNGSRSSTPSPSPLNLSSARNTQGYM
YPAEGAQEEPQVEPLDLSLPKQQGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEPQKD
NCVTDSEPVVNVIPSANPINIAIPTVTAQLPTIVAITDQNSVPCLRALAANKQTILIPQV
AYTYSTTVSPAIQEPPLKVIQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTEN
GMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQ
CDKCGKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEEAGPEVLMNEHAGARASPSQGD
SDERESLTREEDEDSEKEEEEEEDKEIEELQEEKECGKPQGDEEEEEEEEEEMEEEEEVE
EAENERKEANTEGPMKDDGAVSQAGNLEQKVSKSTEQVSEEKTNEA
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataatactgtggtagaaacaaattcagactcagatgatgaagacaaactccac
attgtggaagaagaaagtattactgatgcaggtgattgtgaaggtggggtgcccgatgat
gacctgcccacagaccagacagtgttaccaggaagcagtgagcgagaagggagtgctaag
aattgctgggaagatgacggaaaggaagggcaaggaatcctggggcctgaagctcaggca
ggtgacgcaggatgcacagtaaaagatgacgaatgtgactccgatgcagaaaatgagcaa
aatcatgatcctaatgttgaagagtttctgcaacaacaagacactgctgtcatttatcct
gaggcacctgaagaagaccagcggcagggaacaccagaggccagtggtcatgatgaaaat
ggaacaccagatgcattttcccaattacttacctgcccatattgtgatagaggttataaa
cgctttacctctttgaaagaacacattaaatatcgccatgaaaagaatgaagataacttc
agttgctccctgtgcagttacacctttgcatacagaacccaacttgaacgtcacatgaca
tcacataagtcgggaagagatcagagacatgtgacgcagtctgggggtaatcgtaaattc
aagtgcactgaatgtggaaaagctttcaaatacaaacaccatctaaaagagcacttaaga
attcacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccattct
ggttcctatagttcacatataagcagtaagaaatgtatcagcttgatgcctgtgaatgga
cgaccaagaacaggactcaagacgtctcagtgttcctcaccatctctttcagcatcacca
ggcagtcccacacgaccacagatacggcaaaagatagagaataagccccttcaagaacaa
ctctctgtaaaccaaattaaaactgagcctgtggattatgaattcaaacccattgtggtt
gcttcaggaatcaactgttcaacccctatacaaaatggggtttttagtggtggtggccca
ttgcaggcgaccagttctcctcagggtgtggtgcaagctgttgttctgccaacagttggc
ttggtatctcccataagtatcaatttaagtgatattcagaatgtacttaaagtggcagta
gatggtaatgtaataaggcaagttttggagaataatcaagccaatcttgcatccaaagaa
caagaaacaatcaatgcttcatccatacaaccaggcggccattctgttatttcagccatc
agtcttcctttagttgatcaagatggaacaaccaaaattatcatcaactacagtcttgag
cagcctagccaacttcaagttgttccccaaaatttaaaaaaagaaaatccagttcccgca
aacagctgcaaaagtgaaaagttaccagaagatcttactgttaaaactgagaaagacaaa
agctttgaagggggagtgaatgatagcacttgccttctatgcgatgattgtccaggtgac
ctcaatgcacttccagagttaaagcactatgacctaaagcagcctgctcagcctcctcca
ctcccagccccagaagttgagaagcccgagtcctctgtttcatcgggtactggagatggc
aatttgtctcccagtcagcctcctttaaagaatctcttgtctctcctgaaagcctactat
gctctgaacgcacaaccaagtgcagaagagctctcaaaaatcgctgattcggtaaactta
ccactggacgtagtaaaaaagtggtttgaaaagatgcaagctggacagatttcagtgcaa
tcttctgaaccatcttccccggaaccaggcaaagtaaatatacctgcaaaaaatgatgaa
cagcaccaatctacaaatgcagatgaaccccaggacagcacaataagtctacaaagtcct
ctgaaaatgtctaattctccaggtttaccagtgggatcaacagtcaatggttccagaagt
agtacaccatccccatcacctttaaacctctcctcagccagaaacacacagggttacatg
tacccagcagaaggtgcacaggaagagccacaagtagaacctcttgatctttcactacca
aagcagcagggagagttattggaaaggtcaactatcactagtgtttaccagaacagtgtt
tattctgtccaagaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaaggac
aattgtgttacagactcagaaccagttgtaaatgtaatcccaagtgccaaccccataaat
attgctatacctacagtcactgcccagttacccacaattgtggccattactgaccagaac
agtgttccatgcttacgagcactcgctgccaataagcagactattctaattccacaggtt
gcatacacatactcaactacagtcagccctgcaatccaggaaccacccctgaaagtgatc
cagccaaatggaaatcaggatgaaaggcaagacactagctcagaaggagtatcaaatgtg
gaggatcaaaatgattctgattctacacctcccaaaaagaaaatgaggaagacagaaaat
ggaatgtatgcatgtgacttgtgtgataagatatttcagaagagtagctcattattgaga
cacaaatatgaacacacaggtaaaagacctcatgagtgtggaatctgtaaaaaagcattt
aaacacaagcatcacttgattgaacacatgcgattgcattcaggagaaaagccctaccaa
tgtgacaagtgtggaaagcgcttctcacactcgggatcttattctcagcacatgaatcac
cgctactcctattgcaagagagaagcagaagaacgcgacagcacagagcaggaagaggca
gggccagaagttctgatgaatgagcatgctggtgccagagcatctccctcacagggtgac
tcagatgagagagagagtttgacaagggaagaggatgaagacagtgaaaaagaggaagaa
gaggaggaagataaagagatagaagaattacaggaagaaaaggaatgtggaaaaccacaa
ggggatgaagaagaagaggaggaggaggaggaagaaatggaagaagaagaagaagtagaa
gaggcagagaatgaaagaaaagaagcaaacactgaagggccaatgaaggatgacggagct
gtcagccaggccggcaacttagaacaaaaagtaagcaagagtactgagcaggtgtctgaa
gagaaaacaaatgaagcctaa
DBGET
integrated database retrieval system
