Dipodomys spectabilis (banner-tailed kangaroo rat): 122113476
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Entry
122113476 CDS
T07891
Symbol
Acin1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp03015
mRNA surveillance pathway
dsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122113476 (Acin1)
09122 Translation
03013 Nucleocytoplasmic transport
122113476 (Acin1)
03015 mRNA surveillance pathway
122113476 (Acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122113476 (Acin1)
03041 Spliceosome [BR:
dsp03041
]
122113476 (Acin1)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122113476 (Acin1)
Spliceosome [BR:
dsp03041
]
Complex C
Other components
EJC/TREX
122113476 (Acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
122113476
NCBI-ProteinID:
XP_042542376
LinkDB
All DBs
Position
Unknown
AA seq
1294 aa
AA seq
DB search
MPEAVGTDPSTSRKMAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKG
ALMLENLQKHSTPHAAFQPNSQIGEEMSKNSFIKQYLEKQQELLRQRLEREAREAAELEE
ASAESEDEMIQPEGVASLLPPDFQSSLERPELELSRHSPRNSSSFSEEKGESDDEKPRKG
ERRSSRVRQARAAKLSECSQAAEEEEDQETPSRNLRVRADRNLKREDEEEEEEEDDDEEE
EEDDEGQKSREAPVLKQFEEGEKEKPREKREEMMDENPNIRSQEQQEGLERGGRVTRSQE
EARRSHLARQQQEKEVQMAPPLEEDKREIKSSQGLEEKSQSPSPPQLTEDLEKVPVVLQP
EQTGSEEETPPPLLTKEASSPPPHVQLQSGEDTEPMEGPAPPVLIQLSPPNTDTESREVL
ISQHTVQLVGGMSPLSKPTDTKVESPAEKVSEDSVLPLVQKSIPAEYSAQKFLKTESEKS
AQPLPLTVEELAPAKEITAESLQQQSLEQKESIRVSHTLFPSHRLKQSAESSSSRSSSSS
SSSSRSRSRSPDSSGSQSHSSPQSKQREVSQTGVQANPHGRLKTGSRSTSESRSRSRSRS
ASSSSRKSLSPGVSRDNTSYTETKDPSSVQEIAAPPVPQLQIFEPKERPSTSSSSILMRR
TSQPEPAEKHMTQRLQSEQRSPKKCEAEEAEPPAATQPQTSETQTSNVPESERIHHTVEE
KEEVTMDTSENRPENEVPEPPVPIADQVSNDDRPESSAEDEKKESLLPKSFKRKISVVSA
TKGVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVD
LHADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPP
VPPQVSVEMALPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGK
ISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTAL
HGVKWPQSNPKFLCADYAEQDELDYHRGLLVDRPSETKAEEQGMPRPLHPPPPPPVQPPP
HPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERA
KSKEKKSEKKEKTQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKERE
KRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERDRERDRGDRDRDRERD
RERGRERERDRRETKRHSRSRSRSTPVRDRGGRR
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcggagctggaggag
gtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctgaaggccgccctg
gagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaagcggctcaaaggg
gctctaatgctagaaaacttacagaaacattcgacaccccatgctgcattccagccaaat
tcccagattggggaagaaatgagtaagaacagtttcataaagcagtatctggaaaagcag
caagagctacttaggcagcgtctagaacgtgaagctcgagaagctgcagaacttgaagaa
gcttcagctgagtcggaggacgagatgatccagcctgagggagtggcttccctgctgcct
cctgactttcagagcagcctggagagaccagagctggagctcagcagacattcgcccaga
aacagctcctctttttctgaagagaaaggtgaatctgatgatgagaaaccaaggaaagga
gaaagacgatcttccagggtcagacaggcaagggcagctaaactctctgagtgcagccag
gctgctgaagaagaagaggatcaagaaacaccttctagaaatctgagagtcagggcagat
agaaatttgaagagagaggatgaagaagaggaggaggaggaagatgatgatgaagaggag
gaggaagatgatgagggacaaaaatctagggaggcaccagttctgaaacagtttgaagaa
ggagagaaagagaagcccagagaaaaacgagaggaaatgatggatgagaatcctaacata
agatcccaagaacagcaggagggtttggagagaggagggcgagttacaagatctcaggaa
gaagccagaagaagtcatctggccagacagcagcaagagaaagaagtgcaaatggctcct
ccccttgaggaggataaaagagaaataaaatcttcacagggcttggaagagaaatcccag
tctccttcccctcctcaactgactgaggatctagagaaggtccctgttgtgctacagcca
gagcaaacaggcagtgaagaggagactcctccacctttacttaccaaggaagcatcttct
ccaccacctcatgtacaactccagagtggggaagacactgagcccatggaaggcccagca
cccccagttctcattcagttatctcctcctaatacagacactgagagcagagaggtattg
atatctcagcatactgtccagttggtaggaggcatgtctcctttgtcaaaacctacagac
accaaagtagaatctccagcagagaaagtgtcagaagatagtgtcttgcctctagttcag
aaaagcataccggctgaatactcagcccagaagtttcttaaaactgagtcagaaaaatct
gctcagccactccctctaacagtggaggaattagcaccggccaaagaaatcactgcagag
tctctgcagcagcagtctttggaacagaaggagagcataagggtttctcatactcttttc
ccaagccacagattgaagcagtcagccgaatcatcgtctagccggtcctcctcctcttca
tcctccagttctagatccagatcgcgctctcctgacagttcaggctctcagtctcactca
tctccacaatccaagcagagagaagtatcccagacaggagttcaggccaaccctcatggt
agacttaagacaggctcaaggtcaacatcagagtctaggtcccgttcccgttcccgttca
gcatcaagcagcagcagaaaatctctgagccctggagtctccagggacaacaccagctac
actgaaaccaaagatccctcttctgttcaagagattgcagctccaccagtgccacagctg
cagatttttgaaccaaaggagaggccttccacctcctcatcctctatcttaatgaggcgt
acgagccagcctgaaccagctgaaaaacatatgacccagagattacagtctgagcagagg
agcccaaagaagtgtgaagctgaagaggcagagccaccagctgccacccagcctcaaacc
tcagagactcagacctctaatgtaccagaatcagaaaggattcatcacactgttgaggag
aaggaggaagtgaccatggacacaagtgaaaatagacctgaaaatgaggttccagagcct
cctgtgcctattgcagaccaagtcagcaatgatgaccgcccagagagcagtgctgaagat
gagaagaaagagagtttgctgcccaaatcattcaagaggaagatctccgttgtctcagct
accaagggagtaccagctggaaacagtgacacagaggggggccagcctggtcgaaagcga
cgttggggagccagcacagccactacccagaagaaaccctccatcagtatcaccactgaa
tcgctcaagagcctcatccccgacatcaaacccctggcggggcaggaggctgttgtggat
cttcatgctgatgactctcgcatctctgaggatgaaacggagcgtaatggcgacgatggg
acccatgacaagggactgaaaatatgccggacggtcactcaggtagtacctgcagaaggc
caggagaatggacaaagggaagaagaggaagaagagaaggagcctgaagcagaacctcct
gtacctccccaggtgtcagtagagatggctttgcccccacctgtagaacatgaagtgaaa
aaagtcactttaggagataccttaactcggcggtccattagccagcagaagtctggagtt
tccattacaatcgatgacccagtccgaactgcccaggtgccctccccacccaggggcaag
atcagtaatattgtccatatctccaatttggttcgtcccttcactttaggccaactgaag
gagttgttagggcgtacaggaaccttggtggaagaggccttctggattgacaagatcaaa
tctcattgctttgtaacgtattcaactgtagaggaagccgttgccacccgcacagctcta
catggggtcaaatggccccagtccaatcccaaattcctttgtgctgactatgctgagcaa
gatgagctggattatcaccggggcctcttggtggaccgtccctctgaaacaaaggctgag
gaacagggtatgccacgacccctgcacccaccaccaccacccccagtccagccaccaccc
catccgcgggcagagcagcgggagcaagagcgagctgtgcgagaacagtgggcagagcgt
gaacgggaaatggagcggcgagagcgaactcgatcagagcgtgaatgggatcgggacaaa
gttcgagaagggcctcggtccagatcacggtcccgtgaccgccgccgcaaggaacgtgca
aaatctaaagaaaagaagagtgagaaaaaagagaaaacccaggaagagccacctgctaag
ttactggatgaccttttccgtaagactaaggcagctccttgcatctattggcttccattg
actgacagccagattgttcagaaggaagcggagcgcgctgaacgggccaaggagcgggag
aagcggcggaaggaacaagaggaggaagagcaaaaggagcgggagaaggaagctgagcgg
gaacggaaccgacaactggaacgggagaaacggcgggagcacagccgagaaagggacagg
gagcgagaaagagacagggagcgggaccggggagaccgagatcgggatagggaaagagac
cgggaacgaggcagggagagagagagggatcgcagggaaaccaagcgccacagcagaagc
cggagtcgaagcacacctgttcgggaccgcggcgggcgccgctag
DBGET
integrated database retrieval system
