Dipodomys spectabilis (banner-tailed kangaroo rat): 122113560
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Entry
122113560 CDS
T07891
Symbol
Tnrc18
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 18 protein
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_TNRC18
BAHCC1-like_Tudor
BAH
Tudor_3
DUF4537
Motif
Other DBs
NCBI-GeneID:
122113560
NCBI-ProteinID:
XP_042542517
LinkDB
All DBs
Position
Unknown
AA seq
2915 aa
AA seq
DB search
MDGRDFGPQRSVHGPPPPLLSGLAMDGHRVGAATAGRLPASGLPGPLPPGKYMAGLNLHP
HPGEALLGSFVASGMGPSASSQGSPVSLPSDLSFRSPTPSNLSMVHLWATHAHEGFAHLP
SSLYPSYLHLNHLEPPSSGSPLLSQLGQPSIFDTQKDGFYLPAPGAPGALHSHAASSRTP
SGPAAAKSSARDGASKERAGRGGGGSGGEPPPLFGKKDPRVREEVAGSRGVVDLTQEARA
EGRQDRGPPRLADRLSPFLAEAKAKGAPPPAARSLCGGPGDPGLPPALVTEAVARQDEGP
RLLRPPAPRPCGSPPPLPPRPPPGPGPPGPAGVFAAFREPGREHRVVAPTFVPSVEAFEE
RAGPIQIASQARDARARERDVTRPGVLQAPPGSPRTDPRSDRPEILREKNSVIRSLKRPP
PPVPEAAPARGAPARASPAPKEPPKPEGEPRTCDRAARGPGAHATSARLLGLEPARPAAP
AAPEPKWKPLELGHLATAQMAALAAQHHHAGRAAADDDALAAAKKAYLDPGAALSRSPAA
CARPGAADLGEASAMQSLIKYSGSFARDAAALRPAGAGARKNPFGGLGTMKPEPAPPAAG
APRGAQARAPHPGAPAPAAGRQLKRDPERPESAKAFGRDGPGAQGEAEVRHPPVGIAVAV
ARQKDSGGGGRLGPGLGDQERPLSLSSGKGHSRAEEGCVDERSRHREERLLGGRLDREQE
KLLRESKELADLARLHPTSCAPNGLNPNLMVTGGPTLAGSGRWSADPAAHLASHPWLPRS
GGSSMWLAGHPYGLGPPPLHQGVSPAFPPSLGGSLPSTYQFVRDPQSGQLVVIPSDHLPH
FAELMERAAVPPLWPALYPPGRAPLHHAQQLQLFSQQHFLRQQEFLYLQQQAAQALELQR
SAQLVQERLKTQEQRADMEEKVAKRSLEATAKAGLSASGPGLLPRKPPGLGAGPAGTYGK
AVSPPPSPRASSVAALKAKVTQKLEGVASKPPPYAYPATPSTHPSSPPPASPPPNPGLPR
KEEAPENVVEKKDLELEKEAPSPFQSLFSEIPPRYPFQALPPHYGRPYPFLLQPTTAADA
DGLAPDVPLPADSPERLALSPEDKPIRLSPKIPEPLAEGHEEPQLAPREVKAEVEDEDQG
PPELPPMESPLALPVPDSMAASSPAGGCGGSLLEAQVLRPTAERAEDSELTEGVEAQVEM
QGRTEDLELGTLSPEPLVETKEEPVEVPLGVPVGRPVAEAGPEGSLVQPPLSQPQPSPEL
PVGEGQCSNLETQEAVPGPGRACYLEETSLGHEDPLAGMNALAAAAELPQARPLPSLATG
VEAVEKLDTTQNLALEQSFLQGITLLSEIAELELERRSREAGGTELGLPVRPSLESLLAA
SSHMLKEVLDSPFVDPLKNLRLPRELNPNKKYSWMQRKEERMYAMKSSLEDMDALELDFR
MRLAEVQRQYKEKQRELVKLQRRRDSGDRHEDSHRSLARRGPGRPRKRTHTPSALSPPLK
RGRSHSSSRKLSSKSLLTADDYELGAGIRKRHKGSEEEHDVLMAMGRARGRNQSWEEHEA
SSDFLSQLKIKKKKMASDQEQLANKLDKALSLTKQDKLKSPFKFSDPSGGKSKSNGGCSR
FLTPYDSLLGKDRKALAKGLGLSLKSSREGKHKRAAKARKMEVGFKVRGQPKSAHSPFAS
EVSSYSYNTDSEEEDDFLKDEWSAQGPSSSKLTSSLLCGMVAKNSKPVAGPKLAKRGLAA
PRTLKAKAGAGRKQPFCLLLREAEARSSFSDSSENSFDQDESSEEDDDEEELEEEEEEEE
EETGSGGYRLVSRERALSPGLEESGLGLLARFAASALPSPTVGPALSVVQLEAKQKARKK
EERQTLMGTEFEYTDSESEVKVRRQSPAGVLRPKKGLGEPGPPLATPATSARGPGPASPD
KTKLAPEKGRKARKLRGPKEPGFEAGPEASDDDLWTRRRSERIFLHDASAAAPAPSSAPA
PRAARAKASAPSPRKDAGRAKDRKDPRKKKKGKEAGPAASLPAPRVPALPPEARAPHAGA
LVTARRSKAKPKGKETKKENRGKGGAVSKLMECMAAEEDFEPNQDSSFSEDEHLPHGGAV
ERPLTPAPRSCIIDKDELKDGLRVLIPMDDKLLYAGHVHTVHSPDIYRVVVEGERGNRPH
IYCLEQLLQEAIIDVRPASTRYLPQGTRIAAYWSQQYRCLYPGTVVRGLLDLEDDGDLIT
VEFDDGDTGRIPLSHIRLLPPDYKIQCAEPSPALLVPSAKRRSRKTSKDTREAKEGAGTG
SEEPGAKARGRGRKPSAKAKSDRAAALEEGTPKEEGPSTPLALEPINTPSSKKSAPEPVD
KRAKAPKARPPPPQPSPAPPTFASCPAPEPFGELPAPAAALAPAPLVTMPATRPKPKKTR
ATEESGTKGPRRPGEEAKLLVKLDHEGVTSPKSKKAKEALLLREDPGSGAWQEPKGLLSL
ASYTPAAGSGEPKAAWPKALEGDLTQEPGPGLPLEDPQTPKSPDKTQAEQDGAEESETNS
SSSSSSSSSSSSSGSSSETEGEEDGDKTGEEGRGAGGRHCSASSSRASSPASSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPVPSAS
PSTPPALPTKVAKPANKARSSAHSPGKKAPAAQPPVPPPQPSPPKAQAGAGAKSRPKKRE
GVHLPTTKELAKRQRLPSVENRPKIAAFLPARQLWKWFGKPTQRRGMKGKARKLFYKAIV
RGKEMIRIGDCAVFLSAGRPNLPYIGRIQSMWESWGNNMVVRVKWFYHPEETSPGKQFHE
GQHWDQKSSRSLPTALRASSQRKDFMERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMV
KTKKYQDGEGLYYLAGTYEPTTGMIFSTDGVPVLC
NT seq
8748 nt
NT seq
+upstream
nt +downstream
nt
atggatggccgagacttcggaccccagcggtccgtgcacggccccccgcctccgctgttg
tccggcttggccatggacggtcaccgcgtgggcgcggccaccgccggacgtttgcccgcg
tcgggtctgccgggcccgctgccgcccgggaagtacatggccggccttaaccttcacccg
cacccgggtgaagccctcttgggcagttttgtggccagcgggatggggccctcagcctca
tcccaggggagcccggtgtccctgccctctgacctctccttccgctcccccacccccagc
aacctttccatggtgcacctgtgggccacccacgcccatgaaggctttgcgcacctgccc
agcagcctgtacccatcttacctccacctgaaccacctggagccccccagcagcgggagc
cccctcctcagccagctgggccagcccagcattttcgatacccagaaagatggcttctac
ctgccagccccgggggccccaggcgccctgcactcgcacgcggcgtcctccaggaccccc
agcggccccgcagcagccaagagctccgcgcgggacggggccagcaaggagcgcgctggc
cggggcggcggcggcagcggtggggagccgcccccactgttcggcaagaaggaccctcgg
gtgcgggaagaggtggctgggtctcggggcgtggtggacctgacccaagaggcgagggcg
gaggggcggcaggaccgcggccccccgcgcctggccgaccgcctgtctcccttcctggcc
gaggccaaggccaagggcgcgccgcctcccgccgcccggagcctgtgcggcggccctggg
gacccagggctgccgcccgcgctggtgaccgaggcggtggcgcggcaggacgagggcccc
cggctgctgcgcccgcccgcgccgcggccctgcgggtccccgccgccgctgcctcctcgg
ccgccgcccggccccgggcccccgggccccgcgggcgtcttcgccgcgttccgcgagccg
ggccgcgagcaccgcgtggtggcgcccaccttcgtgccttccgtggaggccttcgaggag
cgcgcggggcccatccagatcgcctcgcaggcccgcgacgcccgtgcccgggagcgcgac
gtgacccggcccggggtcctccaggcccctcccggctccccacgaacagaccctcgctcc
gatcgccccgagatcctgcgggaaaagaactcggtgatccgctcgctcaagcgcccgccg
ccgcccgtgcccgaggccgccccggctcgcggggcccctgcgcgcgcctccccggccccc
aaagagccgcccaagccggagggggagccgcgaacctgcgatcgcgcggcccgcgggccc
ggggcccacgccaccagcgcccggctcctcggcctggagcccgcgcgccccgccgcgccc
gccgcgcccgagcccaagtggaagccgctggagctgggccacctggccacggcgcagatg
gccgcgctggccgcgcagcaccaccacgcgggccgcgccgcggccgacgacgacgccctg
gccgccgccaagaaggcctacctggaccccggggccgcgctgtcccgcagccccgccgcc
tgcgcccgacccggcgccgccgacctcggggaggcctcggccatgcagagcctcatcaag
tacagcggcagcttcgcccgcgacgccgcggccttgcgccctgccggcgccggcgccagg
aagaacccctttgggggcctgggcaccatgaagcctgagcccgcgccccccgccgccgga
gccccccgaggagctcaggctcgggccccgcaccccggagcccccgcgcccgccgccggc
cgccagctgaagcgagaccccgagaggccggagagcgccaaggccttcggccgggatggg
cccggagcccagggcgaggcggaggtgcggcacccgcccgtgggcatcgcagtggccgtg
gcccgccagaaggacagtgggggcggcggccgcctggggcccgggctgggggaccaggag
cggcccttgtcactgagcagcggcaaagggcacagccgggcggaggaaggctgcgtggac
gaacgttccagacaccgggaggagcggctgctcgggggccggctggatcgggagcaggag
aagctgctccgggagagcaaggagctggctgaccttgcccgcctgcaccccaccagctgc
gcccccaacggcttgaaccccaacctcatggtgactggcggccctacactggcgggctcg
gggcgctggtcggcggaccccgcggctcacctggcttcacacccctggctgcccaggtcc
ggaggttcgtccatgtggctggcaggacatccgtacggcctgggccccccacctctgcac
cagggtgtgtcccctgccttcccgcccagcttgggaggctccctgccctccacctaccag
tttgtccgggacccccagtccggccagctggtggtcatccccagcgaccacctgccgcat
ttcgcggagctgatggagcgggccgcggtgcccccgctgtggccggcgctgtacccgccg
ggccgcgcccccctgcaccacgcgcagcagctgcagctcttctcacagcagcacttcctg
cggcagcaagagttcctgtacctgcagcagcaggccgcccaggccctggagctgcagcgc
agcgcccagctggtgcaggagcggctgaagacccaggagcagcgggccgacatggaggag
aaggtggccaagcggagcctagaggccacagccaaggctggcctgtccgcctcggggccc
gggctgctgccccgcaagccaccgggcttgggcgctggccccgcggggacctacggcaag
gccgtgagccccccaccctcaccccgcgcctcgtccgtggccgcgctgaaggccaaggtc
acccagaagctggaaggcgtggcctcgaagccgccgccctacgcctaccccgccacgccc
agcacccaccccagcagccccccgcccgcctccccgccgcccaaccctggcctgccccgg
aaggaggaggcccccgagaacgtcgtggagaagaaagatctggaactggagaaggaagca
cccagccccttccagagcttattctcagaaatcccccccaggtacccgttccaggccctg
cctccacactatgggcgcccgtaccccttcctgctgcagcccaccacggctgccgatgcc
gatggcctggcccctgatgtgccgctgcctgccgacagccccgagcgcctggcgctgtcc
ccagaggacaaacccatccgcctgtcccccaagatccccgagccgctggccgagggccac
gaggaaccgcagctggccccgcgggaggtgaaggccgaggtggaggatgaggatcagggg
cccccggagctgcctcccatggagtcgccgctggccctgcccgtccctgacagcatggcg
gcctccagccctgcgggcggctgtggaggcagcttgttggaggcccaggtgttgaggccc
accgcggagcgggcggaggactcggagctcacggaaggggtagaagcacaggtggagatg
cagggccggacagaagacctggagctggggaccctgagccccgagcccctggtggagaca
aaggaggagccggtggaggtgcccctgggcgtgcctgtaggccgccccgtcgcggaggcc
gggccggagggaagcctggtgcagccgcctctcagtcagccccagcccagcccggaactg
cctgtcggagagggccagtgttctaacctggagacccaggaggccgtccccgggcccggc
cgggcctgctacctggaagagactagcctgggccatgaggatcccctggctggcatgaac
gccctggcagcggcggcagagctaccccaggcccggcctctgccctccctggccactgga
gttgaggctgtggagaagctggacacaactcagaacttggccttggagcagagcttcctg
caaggcatcacgctgctgagtgagattgcagagctggagctggagaggaggagccgggag
gctggaggcacggagctgggccttcctgtgcggccctccctggagagcctcctggccgcc
agcagccacatgctgaaggaggtgctggacagcccctttgtggacccgctcaagaacttg
aggcttccgcgggagctgaaccccaacaagaagtacagctggatgcagaggaaagaggag
cggatgtatgccatgaagtcctcccttgaggacatggatgccctggagctggacttccgg
atgcggctggctgaggtccagaggcaatacaaagagaagcagcgggagctggtgaagctc
cagcgacgccgggactcaggggacaggcacgaggattcccataggagcctggcacgcaga
ggccctggcaggccacggaaacggacccacaccccgagcgccctgtcaccccccctgaag
agagggaggagccacagcagtagcagaaagttgagcagcaaatccttgctgactgcagat
gactacgagctgggagcagggataaggaagaggcacaaggggtctgaggaggagcatgat
gttctcatggcgatgggaagagcccgggggaggaaccagagctgggaagagcatgaagcc
tcctctgactttctgagtcagctgaagattaagaagaagaagatggcaagtgaccaggaa
caactggcaaacaagctagacaaggccctctccctcacaaagcaggacaagttgaagtcg
cccttcaagttttcggacccctctggggggaaatcaaaaagcaatgggggctgcagcagg
ttcttgaccccttatgacagcctgctgggcaaggacaggaaggctctggccaaaggcttg
ggcctgtctttgaaatcctccagagaagggaaacacaaaagggccgccaaagccaggaag
atggaggtggggttcaaggtcagaggccagcccaagtcagcccattccccgttcgcctca
gaagtgagcagctactcttacaatacggactctgaggaagaggatgacttcctgaaggat
gagtggtctgctcaaggcccctccagctccaaactgacctcctccctcctgtgcggcatg
gtggccaagaacagcaagccagtggcaggccccaagctggccaagaggggcctagcagcc
ccccgaactctgaaagccaaggcaggtgctggcagaaagcagcctttctgcctactgctt
cgagaagccgaggcccgctcctccttcagcgactcttcggagaactcctttgaccaagat
gagagttcagaagaggacgacgatgaggaggagctggaggaggaggaagaggaggaggag
gaggaaactggcagtggtggctataggctagtctcccgagagcgggctctgtcgccaggc
ctggaggagagtgggctgggtttgcttgcccgttttgcggccagtgcccttcccagcccc
acagtggggccagccctgtcagtggtccagctggaggccaagcaaaaggcccgcaagaag
gaggagcgacagactctaatgggcacggagtttgagtacacggactcagagagcgaggtc
aaggtgcgcagacagtcacctgcaggggtgctgcggcccaagaaggggctgggggagcca
ggcccccctctagccacacccgccactagtgcccgcggccctggccccgccagcccagac
aagaccaagctggccccagagaaggggcgcaaggcccggaagctgcggggccccaaggag
ccaggcttcgaggccgggcctgaggccagcgacgacgacctgtggacgcggcggcgcagt
gagcgcatcttcctgcacgacgccagcgcagcggcccccgcacccagcagcgcgcctgca
cccagggccgcccgcgccaaggccagcgcacccagcccacgcaaggacgcgggccgggcc
aaggacaggaaggaccctcggaagaagaagaaaggcaaagaggccgggccagccgcctca
ctgccagccccccgggttcctgccctgcctcccgaggccagagccccacacgctggggcc
ttggtgaccgccaggagaagcaaggccaagcctaaggggaaggagacgaagaaggagaac
cggggcaaaggcggggccgtgagcaagctgatggagtgcatggccgcagaggaggacttt
gaacccaaccaggactcgagcttctctgaggatgaacacttgccacatggtggggctgtg
gagcggcccctgactccagcaccacgttcctgcatcatcgacaaggacgagctgaaggac
ggactgcgcgtgctcatccccatggacgacaagctgttgtacgcgggccacgtgcacacc
gtgcactccccggacatataccgtgtggtggtggagggtgaacgagggaaccgaccccac
atctattgcctggagcagctgctacaggaagcgatcattgacgtgcggccagcctcaacg
cgctacctgccacaagggaccaggattgccgcctactggagccagcagtaccgctgcctg
tacccaggcactgtggtccgagggttgctggacctggaagatgacggagacctgatcacc
gtagagtttgatgacggagacacgggcaggatcccactctcccacatccgcctcctgccg
ccagactacaagatccagtgtgcggagccctcccctgcccttctggtgcccagcgccaag
cgccgcagccgcaaaaccagcaaggacaccagggaggccaaagagggcgccgggacgggc
tcggaggagccaggagctaaggcgcgagggcgcgggcggaaacccagtgccaaggccaag
agtgacagagcggctgccctggaggaggggactcccaaggaagaaggccccagcacgccc
ttggccctggagccaatcaacaccccaagctccaagaagagtgccccagaacctgtggac
aagcgggccaaggccccgaaggctcgcccaccacctccgcagcccagccctgctccgccc
acctttgccagctgcccagctcctgagccctttggagagctgccggcacctgccgcagcc
ctggccccggctccgctggttaccatgcccgccacccgcccaaagcccaaaaagactcgt
gctaccgaggagtctggcaccaagggcccccggaggccaggggaagaggccaagctgctc
gtcaaactggatcacgagggggtcacatcccctaaaagcaagaaggccaaagaggccctg
cttctgcgggaagacccggggtctggggcctggcaggagcccaagggcctgctgagcctg
gccagctataccccagcagcaggcagtggagagcccaaggcggcctggcccaaagccctg
gagggggacctcacccaagagcccgggccagggctccccctggaggaccctcagactccc
aagagcccagacaagacccaggctgagcaggatggggctgaggagtcggagacgaacagc
agcagcagcagcagcagcagtagcagcagcagcagcagcggcagcagctcagagacggag
ggcgaagaggatggagacaaaactggggaggagggccggggcgccgggggccggcactgc
agcgcatccagctccagagcctcctccccagcctcttcctcctcctcgtcctcatcttca
tcttcctcctcctcgtcctcttcctcctcctcctcctcttcctcttcttcctcctcctcc
tcttcctcctcctcttcgtcctcttcttcctcctcctcctcttcctcttcctcctccacc
acagacgaggactcatcctgcagctcagatgacgaggcggcgcctgtgccctcagccagc
ccctccaccccgcccgccctgcccaccaaggtggccaagccagccaacaaggcccgctcc
tcggcccactccccgggcaagaaggcacctgctgcccagccccccgtcccgccaccccag
ccctcgccacccaaggcccaggctggggctggggccaagagccgacccaagaagagagag
ggcgtccacctgcccaccaccaaggagctggccaagcgccagcgcctgccatctgtagag
aacaggcccaagattgccgccttcttacccgcccggcagctctggaagtggttcggcaag
cccacccagcggcgcgggatgaagggcaaggcccgcaagctcttctacaaggccatcgtc
cgcggcaaggagatgatccgcatcggggactgtgctgtgttcctgtcagccggccggccc
aacctgccctacatcggccgcatccagagcatgtgggagtcatggggcaacaacatggtg
gttcgtgtcaagtggttctaccaccctgaggagaccagcccaggcaagcagttccacgag
ggccagcactgggaccagaagtctagccgcagcctccccacggccttgcgggcctccagc
cagaggaaggacttcatggagcgcgccctgtaccagtcgtcacacgtggacgagaacgac
gtgcagacggtgtcgcacaagtgcctagtggtgggcctagagcagtatgagcagatggtc
aagaccaagaagtaccaggacggcgagggcctgtactacctggcgggcacctatgagccc
accaccggcatgatcttctccacggacggcgtgcccgtgctctgctga
DBGET
integrated database retrieval system
