KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122113602
Entry
122113602         CDS       T07891                                 
Symbol
Kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dsp03036]
    122113602 (Kdm4c)
Enzymes [BR:dsp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     122113602 (Kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     122113602 (Kdm4c)
Chromosome and associated proteins [BR:dsp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122113602 (Kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_5 DUF7141 LBR_tudor
Other DBs
NCBI-GeneID: 122113602
NCBI-ProteinID: XP_042542586
LinkDB
Position
Unknown
AA seq 1088 aa
MEVAEAGSPLNPSCKIMTFRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQC
YDDIDNLLIPAPIQQMVTGQSGLFTQYNIQKKAMTVKEFRQLANSGKYCTPRYLDYEDLE
RKYWKNLTFVAPIYGADINGSIYDEGVDEWNIARLNTVLDVVEEECGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFL
RHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWID
YGKVAKLCTCRKDMVKISMDIFVKKFQPDRYQLWKQGKDIYTIDHIKPTPESTPEVKAWL
QRRRKVQKAPKSVQGSRSHSKRPKAEEDEEMSAQDNGEEVPSSDLGSESLKVAGKPKGGS
KLEKTDIPSEEASVSRMQVDQNFSDNTKLSGNSCLNASKMEETKTEDDKAYTITVSYMSQ
EANDSTPLSSGLVKVEESDPRKHLWQKSPEFGSSVAESNDVFTEGEESDVEDRGSGLEPG
EISAVLSEDRNDFKVPGMIEGETKTAKSWRHPLSKPPARSPMTLVKQQAASDEELPEVPS
TEEEVEETESWAKPLIHLWQTKSPNFVAEQEYNAAVAKMEPHCAICTLLMPYYKPDSSNE
ENDLRWETKLNEVVTLGGKTKPLIPEMCFIYSEENIEYSPPNAFLEEDGTSLLISCAKCC
VRVHASCYGVPSHEIYDGWLCARCKRNAWTAECCLCNLRGGALKQTKNNKWAHVMCAVAV
PEVRFTNVPERTQIDVGRIPLQRLKLKCIFCRHRIKRVSGACIQCSYGRCPASFHVTCAH
AAGVLMEPDDWPYVVNITCFRHKVNPNVMLQEADAPVQVSGDGEQRPYLGFGDTSKIDLK
ALKSKACEKAISVGQTVITKHRNTRYYSCRVIAVTSQTFYEVMFDDGSFSRDTFPEDIVS
RDCVKLGPPGEGEVVQVKWPDGKLYGAKYLGSNVAYMYQVEFEDGSQIAMKREDIYTLDE
ELPKRVKARFSTASDMRFEDTFYGADIIQGERKRQRVLSSRFKNEYVDDPVYRTFLKSSF
QKKCQKRQ
NT seq 3267 nt   +upstreamnt  +downstreamnt
atggaggtggcggaggcggggagccccctgaaccccagctgtaagataatgactttcaga
ccctccatggaggagttccgggagttcaacaaataccttgcctacatggaatcgaaagga
gctcaccgagcaggtcttgcaaaggtgattcctcctaaggaatggaagccaagacaatgc
tatgatgacattgataatttgcttattccagcaccgattcagcagatggtcacagggcag
tcgggactgtttactcaatacaacattcagaaaaaggccatgactgtgaaggagttcaga
caactggccaacagtggcaaatattgtactccaagatacttggattatgaagatttggaa
cgcaaatactggaaaaatttaacttttgtggcacctatctatggtgcagatattaatggg
agcatatatgatgagggtgtggatgaatggaacatagcccgcctaaatactgtcttggat
gtagtggaagaagagtgtggcatttctattgagggtgtgaatactccctacctctatttt
ggcatgtggaaaaccacatttgcatggcacaccgaggacatggacctctacagcattaac
tatctccactttggagagcccaagtcttggtatgctatacccccggagcatgggaaacga
cttgaaagactagcccaaggatttttcccaagcagctcccaaggttgtgatgcgtttctt
cgccacaagatgacattgatttctccttctgtattgaaaaagtatggaattccctttgac
aagataacccaggaggctggggaattcatgatcacttttccatatggctaccatgctggt
ttcaatcatggtttcaactgtgcagagtccacaaattttgctactgtcagatggattgac
tatggaaaagttgctaaattgtgcacttgcaggaaagacatggtgaaaatttcaatggat
atctttgtgaagaaatttcagccagacagataccagctttggaaacaaggaaaggatata
tacaccattgaccacataaagcctactccagaatctactcctgaagtaaaagcctggcta
cagagaaggaggaaagtacaaaaggcacctaagagtgtccagggaagtaggtctcactcg
aagaggcctaaggctgaagaggatgaagaaatgtccgctcaagacaatggggaggaggtg
cccagttctgacctaggctcagagagcctcaaggttgcaggaaagccaaaaggggggtca
aagctggagaagacagacataccttcagaagaggcctctgtcagcaggatgcaggtggat
caaaatttctcagataataccaaactctcaggaaacagctgcttaaatgcatctaaaatg
gaggaaacaaaaactgaagatgacaaagcctacaccataactgtctcatatatgtcccag
gaggccaatgattccacgccattgtctagtggcctggtaaaggtggaggaatcagaccca
cgtaagcacctgtggcaaaagtctcctgagtttggttcctcagtggcagagagcaatgat
gtgtttacagagggagaagagagtgatgtagaagaccggggaagtggcctggaacctggg
gaaatctcagcagtcctcagtgaagatagaaatgacttcaaggtccctggcatgatagag
ggagagaccaaaactgctaagagttggcgtcatccacttagtaagcctccagccagatct
ccaatgactcttgtaaagcagcaggcagcaagtgatgaagaattgcctgaggtcccatct
actgaggaagaagtagaagaaacagaatcctgggcaaagcctctcattcatctttggcaa
acaaaatctcccaattttgtggctgagcaagagtataatgcagctgtagcaaagatggag
ccacactgtgccatttgcactctgctcatgccatactataagccagatagcagcaatgaa
gaaaatgatttgagatgggagacaaaattgaatgaagtggttactttgggaggaaagact
aagcccctcattccagagatgtgttttatttatagtgaagaaaacatagaatattcccca
cctaatgccttccttgaagaggacggaacaagtcttctaatttcctgtgcgaagtgctgt
gtacgagttcatgcaagttgttatggtgtcccttctcatgagatctatgatggatggcta
tgtgcccgctgcaaaagaaatgcatggacagcagaatgttgtctctgcaatttgagaggt
ggtgctctgaagcaaactaagaacaataagtgggcccatgtcatgtgtgctgttgcagtc
ccagaagttcgattcactaatgtcccagaaaggacacaaatagatgtaggcagaatacct
ttacagaggttaaaattgaaatgcatcttctgcagacatcggataaagagggtctctgga
gcgtgcatccagtgttcctatggccgatgcccagcttccttccatgtcacatgtgcccac
gctgctggggtactgatggagcctgacgattggccttatgtggtgaacataacgtgcttc
cgccataaggttaacccaaatgtgatgctgcaggaagctgatgcaccagtgcaggtgagc
ggagatggggaacagcggccatatcttggttttggagacacttcgaagatagacttaaag
gccttgaagtctaaggcatgtgagaaggccatctctgtgggtcagacagtcatcacaaag
catcggaacacgcggtactacagctgcagggtgatagcggtgacgtcacaaaccttctat
gaggtcatgtttgatgatggctcctttagcagggacacatttcctgaagatattgtgagc
cgagactgtgtgaagctaggccctcctggagagggagaagttgtccaagtcaagtggcca
gatggcaaactctacggagcaaaataccttggatcaaatgttgcctatatgtaccaggtt
gaatttgaagatggatcccagatagcaatgaagagagaggatatctacaccttagacgaa
gaactacccaagagggtgaaggctcgcttttccacagcctctgacatgcgatttgaagac
acattttatggagcagacattatccaaggggagaggaagagacaaagagtgctgagctcc
aggttcaagaatgaatatgtggatgaccctgtgtaccgcactttcttgaagagctctttc
cagaagaagtgtcagaagaggcagtag

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