Dipodomys spectabilis (banner-tailed kangaroo rat): 122113736
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Entry
122113736 CDS
T07891
Symbol
Cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03015
mRNA surveillance pathway
dsp05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122113736 (Cpsf4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
122113736 (Cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsp03021
]
122113736 (Cpsf4)
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122113736 (Cpsf4)
Transcription machinery [BR:
dsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122113736 (Cpsf4)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122113736 (Cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-CCHC_3
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
122113736
NCBI-ProteinID:
XP_042542745
LinkDB
All DBs
Position
Unknown
AA seq
269 aa
AA seq
DB search
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPLCKFMHPRFELPMGTTEQPP
LPQQTQPPTKQSNNPPLQRSSSLIQLTSQNSSPNQQRAPQVIGVMQSQNSSAGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagatcatcgccagcgtggaccacatcaagttcgacctggagatcgccgtggag
cagcagctcggggcgcagccgctgcccttcccgggcatggacaagtccggggctgctgtc
tgcgaattctttttgaaagctgcctgtggcaaagggggtatgtgcccattccgccacatc
agcggtgagaagacagtggtgtgcaagcactggctgcgagggctgtgcaagaaaggggac
cagtgtgagttcttacatgagtatgacatgaccaagatgcccgagtgctacttctactcc
aagtttggggaatgcagcaacaaggagtgtcccttcctgcacattgaccctgagtccaag
attaaggactgcccttggtacgaccgtggcttctgcaagcatggtcccctgtgcaggcac
cggcacacacggagagtcatctgtgtaaattacctcgtcggattctgcccggagggaccc
ttgtgtaaattcatgcaccctcgatttgaactgcccatgggaaccactgagcagccccca
ctgccgcagcagacgcagccaccgacaaagcaaagtaacaatccgccattacaaaggtcg
tcctccctgatccagttaacgagtcagaactcttctcccaatcagcagagagccccgcag
gtcatcggggtcatgcagagtcagaacagcagtgcaggcaaccggggaccccggccgctg
gagcaggtcacctgttacaagtgtggtgaaaaaggacactatgccaacagatgcaccaaa
gggcacttggcctttctcagtggacagtga
DBGET
integrated database retrieval system
