KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122113746
Entry
122113746         CDS       T07891                                 
Symbol
Wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
  KO
K17908  autophagy-related protein 18
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04136  Autophagy - other
dsp04140  Autophagy - animal
dsp05010  Alzheimer disease
dsp05014  Amyotrophic lateral sclerosis
dsp05016  Huntington disease
dsp05017  Spinocerebellar ataxia
dsp05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    122113746 (Wipi2)
   04136 Autophagy - other
    122113746 (Wipi2)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    122113746 (Wipi2)
   05014 Amyotrophic lateral sclerosis
    122113746 (Wipi2)
   05016 Huntington disease
    122113746 (Wipi2)
   05017 Spinocerebellar ataxia
    122113746 (Wipi2)
   05022 Pathways of neurodegeneration - multiple diseases
    122113746 (Wipi2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dsp04131]
    122113746 (Wipi2)
   03029 Mitochondrial biogenesis [BR:dsp03029]
    122113746 (Wipi2)
Membrane trafficking [BR:dsp04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    122113746 (Wipi2)
Mitochondrial biogenesis [BR:dsp03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    122113746 (Wipi2)
SSDB
Motif
Pfam: PROPPIN WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 WD40 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd DUF7165 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_Vps41 BCAS3_WD40 Beta-prop_RSE1_2nd RMC1_N Beta-prop_IFT140_1st VID27
Other DBs
NCBI-GeneID: 122113746
NCBI-ProteinID: XP_042542760
LinkDB
Position
Unknown
AA seq 463 aa
MNLASQSGEAGAGQLLFANFNQDNTREKKRARASGRRHRDYAWSLAVGSKSGYKFFSLSS
VDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTIL
AVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPTGLCALSINNDNCYLAYPGSAT
IGEVQVFDTINLRAANMIPAHDSPLAALAFDASGSKLATASEKGTVIRVFSIPEGQKLFE
FRRGVKRCVNICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLM
ASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGASDGYLYMYNLD
PQEGGECALMRQHRLDGSMETTSEIVDSASHDCPLVTQTYSTAAAKGAYTPSSPTRLGKG
QDTNLEAYTDDLGAVGGTCLEEEASALRLDEDSEHPPMILRTD
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgaacctggcgagccagagcggcgaggccggcgccggccagctgctgttcgccaacttc
aaccaggacaacacaagagagaaaaagagagcaagagcatctggtcgtcgtcatcgtgac
tatgcctggtccctagcagttggtagtaagtccggttataagtttttctccctttcttct
gtggataagctggaacagatctatgaatgcactgacacagaagatgtgtgcatcgtggaa
agattgttctcgagcagcttagtggccatcgttagtctcaaagctcccaggaaactgaag
gtttgccactttaagaagggaacagagatctgcaactacagctactccaacaccatcctg
gccgtgaagctcaacaggcagaggctcatcgtgtgtctggaggagtctctgtatatacac
aacatccgggacatgaaggtactgcacaccatcagggagacccccccaaaccccacaggc
ttgtgtgcgctgtcaataaacaacgacaactgctacttggcctatccagggagtgccacc
attggagaggtgcaagtcttcgataccattaatctgagagctgcaaacatgatcccggct
catgacagtcctttagctgcgctggcttttgatgcaagtgggagcaaactagccactgct
tctgagaaggggaccgtgattagggtattttccattccagagggacagaaactctttgag
ttccggagaggagtaaagaggtgtgtgaacatctgctcactggccttcagcatggacggc
atgttcctgtctgcatccagcaacacggagactgtgcacatcttcaaactggagacagta
aaggagaagcctccggaggagcctaccacctggaccggctactttgggaaggtgctcatg
gcctccaccagctacctgccctcccaggtgacagaaatgttcaaccagggccgagccttt
gccaccgtccgcctaccattctgtggccacaagaacatctgctccttggccacgatccag
aagattccccggctactggtaggggcatcggacggctacttgtacatgtacaacctggac
ccccaggagggcggcgagtgtgcgctcatgcgccagcataggctggatggcagcatggag
accaccagtgaaatcgtagactctgcctcccacgactgcccactagtcactcagacgtac
agcacagcggcggccaaaggtgcctacacgccctcatctcccaccagacttggcaagggt
caagacaccaacttagaagcctacacggacgacctgggtgccgtgggtggcacttgcctg
gaggaggaagccagcgccctgcgcctggatgaggacagtgagcatccccccatgatcctc
cgcacggactga

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