Dipodomys spectabilis (banner-tailed kangaroo rat): 122113864
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Entry
122113864 CDS
T07891
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03430
Mismatch repair
dsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122113864 (Pms2)
03460 Fanconi anemia pathway
122113864 (Pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122113864 (Pms2)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122113864 (Pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
122113864
NCBI-ProteinID:
XP_042542924
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MELAAGSSTELTKAIKPIDGKSVHQICSGQVVLSLSTAVKELVENSVDAGATSIDLRLKD
YGVDLIEVSDNGCGVEEGNFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV
TISTCHASSKVGTRLVFDHNGKIIQKNPYPRPKGTTVTLQHLFYTLPVRHKEFQRNIKKE
YAKMVQVLQAYCIISAGVRVSCTNQLGQGKRQPVVCTNGGSSVKENIGSVFGQKQLQSLI
PFIQLPPSDSVCEEYGLSCSEALHNLFYISGFISRCTHGVGRSATDRQFFFINHRPCDPA
KVSRLVNEIYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLI
GMFDSDVNKLSVNQQALLSVEGNLIKMRGTEAETPLPDSPPSSSTQEEDKRSVSISRLRE
AFSLRHPAETKSPGPRTPELRWNSPVQKKRVPSSASNPASGRSLQGPLEEVVTHKDSDGR
GDRVEVEKDSGYTSTSAAPEEGFSPPEVGSSSSDHAESSPEDRFSQGDMDSGENLPELDQ
PPSAGESEKEKDGPCQLLPPQTHLSSSSAKRFKKEIPSNTNTPPKSATTENASAAQVDVA
VTISKKIVLLAFSMSSLATRIKQLNCQRQQREGKPNYRKFRARICPGENQAAEDELRKEI
SKSMFADMEVLGQFNLGFIITKLKEDIFLVDQHAADEKYNFEMLQRHTVLQAQRLIVPQA
LNLTAVNEAILIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIF
MLSESPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKVIAHMGEMDHPWNCPHGRP
TMRHIANLDVISQS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgccgcgggatcgagtacagagctcacaaaggccatcaaacctatcgatggg
aagtcagttcatcagatttgttctgggcaagtggtcctaagtttaagcactgctgtaaag
gagttggttgaaaatagtgtggatgctggtgccactagtattgatctcaggcttaaagat
tatggggtggatctcattgaagtttcagacaacggatgtggggtagaggaaggaaacttt
gaaggcttagctctgaaacatcatacttctaagattcaagagtttgctgacctcacccag
gttgaaacttttggctttcggggagaagctttgagctcactctgtgcactgagtgatgta
actatttctacctgccacgcatcttcaaaagtggggacccgactggtgtttgatcacaat
gggaaaattatccagaaaaacccctacccacggcccaaggggaccacagtcactctgcag
catttgttctatacgctccctgtgcgccataaggaattccaaaggaatattaaaaaggag
tatgccaaaatggtccaggtgttacaggcatactgtatcatttcagcaggtgtccgagta
agttgtaccaatcagcttggacaaggaaaacggcagcctgtggtttgcactaatggaggc
tccagtgtcaaagagaatattggctctgtgttcgggcagaagcagctgcaaagcctcatt
cctttcattcagctgccccctagtgactctgtctgtgaagagtatggtcttagctgttct
gaggcgctgcacaatctgttttacatctccggcttcatctcacgctgcacgcacggcgtt
gggaggagtgccactgaccggcaattctttttcatcaatcatcggccttgtgacccagca
aaggtgtccagacttgtgaatgagatctaccacatgtataatcgtcatcagtatccattc
gttgttcttaacatttcagttgattcagagtgtgtggatatcaatgtaactccagataag
aggcaaattttgctgcaagaggagaagcttttattggctgtgttaaagacttcactcata
ggaatgttcgatagtgatgtgaacaaactcagtgtcaaccaacaggcactgctgagtgtt
gaaggtaacttgataaagatgcgtgggacggaagcagaaacacctctgccagacagtcct
ccttcgtctagcactcaggaagaagacaaaaggtccgtgtccatttccaggctgagagag
gccttttctcttcgtcatcctgcagagaccaaatctccaggcccaaggactcctgaactg
agatggaattctccagtacagaaaaagagggtaccctctagtgcctccaatcctgcctct
ggcagaagcctgcagggccctctggaagaggtggtgactcacaaggactcagatggccgt
ggggacagagtggaagtggagaaagactcggggtacaccagtacatcagctgccccagag
gaagggttcagccccccggaagtgggcagtagcagtagcgaccatgcagagagctcccca
gaagacagattttcacaaggagacatggactctggtgagaatctacctgaactggaccaa
cccccttcagctggggagtcagagaaggaaaaagatggcccctgtcaacttctgcctcct
cagacacatctctcctcctccagtgctaagcgatttaaaaaagaaattccctcaaatacc
aacactcccccaaagtcagctaccactgagaacgcctcagcagcccaagtggatgtggct
gtgacaattagtaagaaaatagtgctccttgccttttctatgagctctttagctacacga
ataaagcagttgaattgccaaagacaacaaagggaaggcaaaccgaattacaggaaattc
agggcaaggatctgtccaggagaaaaccaagcagcagaagatgaactaagaaaagagata
agtaagtcaatgtttgcagacatggaggtgcttggtcagtttaacttggggttcataata
accaagctgaaggaggacatcttcctggtggaccagcatgcagctgatgagaagtacaac
ttcgagatgctgcagcgtcacacagtactccaagcacagaggctcattgtacctcaggct
ctcaacttaactgctgtcaatgaagctatcctgatagaaaatctggaaatattcagaaag
aatggctttgactttgtcattgatgaagatgctccagtcactgaaagagctaaactgatt
tccttgccaactagtaagaactggacttttggaccccaagatatagatgagctcatcttc
atgctgagtgagagcccgggggtcatgtgccggccctcccgagtcaggcagatgtttgcc
tcgagagcctgtcggaaatctgtgatgattggaacagctcttaacaccagcgagatgaag
aaggtcatcgcccacatgggcgagatggaccacccctggaactgcccccacggaaggccg
accatgaggcacattgctaatctggatgtcatttctcaaagctga
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