Dipodomys spectabilis (banner-tailed kangaroo rat): 122114288
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Entry
122114288 CDS
T07891
Symbol
Dscam
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122114288 (Dscam)
Cell adhesion molecules [BR:
dsp04515
]
Immunoglobulin superfamily
DSCAM family
122114288 (Dscam)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
Pur_ac_phosph_N
C2-set_2
Sp38
C1-set
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
Adeno_E3_CR1
DUF6377
RIFIN
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
122114288
NCBI-ProteinID:
XP_042543276
LinkDB
All DBs
Position
Unknown
AA seq
2012 aa
AA seq
DB search
MWILALSLFQSFANVFTEEAHSSLYFVNASLQEVVFASTSGTLVPCPAAGVPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGSRFLIPSTGA
LYIKDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHHKAMAGQ
RVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENTRPSDSGSYVCEVSNRYG
TAKVIGRLYVKQPLKATISPRKVKSSVGSQVALSCSVTGTEGQELSWYRNGEILHPGKNV
RITGLNHENLIMDHMAKSDGGAYQCFVRQDKLSAQDYVQVVLEDGTPKIISAFSEKVVSP
AEPVSLMCNVKGTPLPTITWTLDDDPILKGGGHRISQMITSEGNVVSYLNISSSQVRDGG
MYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKN
SNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPT
IVWKFSKGAGVPQFQPIALNGRIQVLNNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQKKEMSCAAHGEKPIIVRWEKEDRIINPEMARYLVSTK
EMGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIKDVKART
ITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRM
YAKNRIGKSEPSNELTITADEAAPDGPPQEVHLEPISSQSIRVTWKAPKKHLQNGIIRGY
QIGYREYSTGGNFQFNIISIDTTGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEII
TTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLMDGELGEI
KNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWM
KDSNGTPSLVTVDGRRGVFSNGSFIIRTVKAEDSGYYSCVANNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLEN
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLSLVGWN
DGGCPITSFTLEYRPFGTLVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQ
ANFATLNYDGSTIPPLIKSVVQSEEGLTTNEGLKMLVTISCILVGVLVLFVLLLVLRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGEAAKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTVTECFISDTSSEQLTAGTNEYTDSLTS
STPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLIHLPPYLRMDFLLNRGAPGTSR
DLSLGQACLEPQKSRTLKRPTVLEPIPMEASSSTSSTREGPSWQQGAVATLPQREGAELG
QAVKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactggccctctccttgttccagagcttcgcgaatgttttcactgaagaagct
cactccagcctctactttgtcaatgcatctctgcaagaggtagtgtttgccagtacctcg
gggacgctggtgccctgcccggccgcaggcgtccctcctgtgactctcagatggtaccta
gccacgggtgaggagatctacgatgtccccggcatccgccatgtccaccccaacggcact
ctccaaatcttccccttccctccttcgagcttcagtaccttaatccacgataatacttac
tattgcacagctgaaaatccttcagggaaaattagaagtcaggatgtccacatcaaggct
gttttacgggagccctatacagtccgtgtggaggaccagaaaaccatgagaggcaatgtt
gcggtcttcaagtgcattatcccctcctcggtggaggcgtacatcaccgttgtctcatgg
gagaaagataccgtttcacttgtgtcaggatctagatttctcatcccatccacgggagcc
ttgtatattaaagatgtacagaatgaagatggattgtataactaccgctgtatcacgcgg
cacaggtacactggagagacaaggcagagtaacagtgcgagactctttgtatcagaccca
gcgaactcggccccatccatcctggacgggttcgaccatcacaaagccatggctggccag
cgggtggagctgccttgcaaagcccttggacacccagagcccgactaccgttggctgaag
gataacatgcccctggaactttccgggaggttccagaagacagtgacagggctgctcatc
gagaacacccggccctcagactctggcagttatgtgtgtgaggtgtccaaccgctatggg
acggctaaggtgataggccgcctgtacgtgaaacagccgcttaaggccaccatcagcccc
aggaaggtgaagagcagcgtggggagccaagtggctttgtcctgcagcgtcacaggaacc
gagggccaggaactgtcctggtaccgcaacggcgagatcctccaccccgggaaaaacgtg
aggatcacaggcctcaaccacgagaaccttatcatggatcacatggccaagagcgacggg
ggcgcctaccagtgcttcgtgcgccaggacaagctgtccgcccaggactacgtgcaggtg
gtcctcgaagatggaactcccaagatcatctctgccttcagcgagaaggtggtgagcccc
gccgagcccgtgtccctgatgtgcaacgtgaaggggacgcccctgcccaccatcacgtgg
accctggacgatgaccccatcctcaagggcggcggccaccggatcagccagatgatcacg
tccgaagggaacgtggtcagctacctgaacatctccagctcgcaggtccgggatgggggc
atgtaccgctgtacggccaacaactcagctggagtcgtcctgtaccaggctcgaataaac
gtaagagggcctgcaagcattcgacccatgaaaaacatcacagccatagcaggacgggac
acatatattcactgtcgagtgattggctacccctattactccatcaaatggtacaagaac
tcgaatctgcttccttttaaccaccgccaggtggcatttgagaacaatgggacgctaaag
ctctctgatgtccaaaaagaggttgatgagggcgagtacacgtgtaacgtgttggtacag
ccacagctctccaccagccagagcgtccacgtgacggtgaaagttccaccttttatccaa
ccctttgagttcccgagattctccatcggccagcgggtcttcatcccgtgcgtggtggtc
tcgggggacttacccatcaccatcacctggcagaaggatggccggccgatccccgccagc
ctcggggtgaccatcgacaacatcgacttcaccagctccctgaggatctccaacctctcc
ctgatgcacaacgggaactacacgtgcatagcacggaacgaggcggccgcggtggagcac
cagagccagctcatcgtgagagttcctcccaagtttgtggttcaaccccgggaccaggat
gggatttatggcaaggccgtcatcctcaactgctcggctgagggctatccagtgcccacc
attgtgtggaaattctcgaaaggtgctggggttccccagttccagcccattgccctcaat
ggccggatccaggttctcaacaacggctcactgctgatcaagcacgttgtggaagaagac
agcggctactacctctgcaaggtcagcaatgatgtgggcgcagacgtcagcaagtccatg
tacctcacggttaaaattcctgccatgatcacgtcctatccaaacacaactctggctact
cagggtcagaagaaggaaatgagctgcgcggcccatggtgaaaagcccattattgtccgc
tgggagaaagaagacaggatcattaacccggagatggcccgctatctcgtgtccaccaag
gagatgggcgaggaggtgatttctactctacagattttgccaactgtgagagaagattct
ggcttcttctcctgccatgctatcaattcttacggggaggaccgtggaatcattcagctc
acagtgcaagagcccccagaccctcctgaaattgagattaaagacgtcaaagcacgcaca
attacgctcagatggaccatgggctttgatggaaacagccccatcaccggctatgatatt
gaatgcaaaaataaatcagactcgtgggattctgctcagagaaccaaagatgtttcccct
cagctgaactccgccaccatcattgatatccacccttcctccacctacagcatccgcatg
tacgccaagaaccggatcggcaagagcgagcccagcaacgagctcaccatcacagcggac
gaagcggctcccgacggtccacctcaggaagttcacctggagcccatatcctctcagagc
atcagggtcacctggaaggctcccaagaaacatctgcagaatgggattatccgtggctac
caaatcggttaccgagagtacagcaccgggggcaacttccagttcaacatcatcagcatc
gacaccacgggcgacagcgaggtgtacacgctggacaacctcaacaagttcacccagtac
ggcctggtggtgcaggcctgcaaccgggctggcacggggccttcttctcaggaaatcatc
accaccaccctcgaggacgtgcccagttatccccctgaaaatgtccaagccatagcaaca
tcaccggaaagcatatcaatctcctggtccaccctttccaaggaagccctgaacggaatt
ctccaggggttcagggtcatctactgggccaacctcatggatggagagctgggcgagatt
aagaacgttaccaccacacagccttccctggagctggatgggctggagaagtacaccaac
tatagcatccaggtgctggccttcacccgggccggggacggggtccgcagcgagcagatc
ttcacccggaccaaagaggatgttccaggccctccggcgggcgtcaaagcagcagcggcc
tctgcctccatggtcttcgtgtcctggctgccgccgctcaagctgaacggcatcatccgg
aagtacaccgtgttctgctcacacccctaccccacagtgatcagcgagtttgaagcctcc
cctgactcattttcctacagaattcccaacctgagccggaaccgtcagtacagcgtctgg
gtggtggccgtcacctccgcaggtcgagggaacagcagtgagatcatcacggtggagcca
ctggcaaaagctcctgcgcgaatcctcaccttcagcgggacggtgaccactccctggatg
aaagacattgtcttgccttgtaaagctgtcggggacccctcgcccgcagtgaagtggatg
aaagacagtaacgggacgcccagcctggtgacggttgacggacgccggggcgtcttcagc
aacggaagcttcatcatccgcacggtgaaggctgaggactccggctactacagctgcgtc
gccaacaacaactggggatccgatgaaattattttaaatttacaagtgcaagtgccaccc
gaccagcctcggcttacggtttccaaaacgacatcttcctccatcactctttcttggctt
cctggagacaacgggggtagctccatccgagggtacatcctgcagtattccgaagacaac
agtgaacagtggggaagctttcccatcagccccagcgagcggtcttaccgcctggaaaac
ctgaagtgtggaacctggtataagttcaccctcaccgcccaaaacggagtggggcctggg
cgcatcagtgaaatcatagaggcgaaaaccctggggaaagagccccagttctccaaggag
caagagctgttcgccagcatcaacaccacgcgcgtgcggctgagcctggtgggctggaac
gacggcggctgccccatcacctccttcacgcttgagtaccggcccttcgggaccctggtg
tggaccaccgctcagcggacctccctctccaagtcctacatcctgtatgacctgcaggaa
gccacctggtacgagctgcagatgcgcgtgtgcaacagcgccggctgcgccgagaagcag
gccaacttcgccacgctcaactacgacggcagtacaattcctccactcattaagtcagtc
gtccaaagcgaagaggggctgaccaccaatgaggggctcaagatgctggtgaccatctcc
tgcatcctggtgggggtcctggtgctcttcgttctcctgctggtcctgcggaggaggaga
cgggagcagaggctgaagcggctccgagatgcaaagagtttggctgaaatgctcatgagt
aagaatactcgaacttcggacaccttaagcaaacaacaacaaactctgagaatgcacatc
gacataccccgggctcagctattgattgaagagagggacacaatggagactatagatgac
cgctccaccgtcttgctgaccgatgccgactttggagaagccgcgaaacagaagtccctg
acggtgacccacacggtccactaccagtcagtgtcgcaggccaccgggcccctggtggat
gtgtcagatgctcggccaggcacgaaccctaccaccaggcggaatgccaaggccgggccc
acggcgaggaaccggtacgccagccaatggaccctcaaccgaccccacccgaccatctcc
gcccacaccctcaccacagactggaggctgccgacgcccagggccacggggtccgtggac
aaggagagtgacagctacagcgtcagcccatcacaggacacagaccgagcgagaagcagc
atggtctctacggaaagcgcttcctccacctacgaggagctggccagggcctatgaacac
gccaagatggaggagcagctgcggcacgccaagttcaccgtcacggaatgcttcatctcc
gacacctcctccgagcagctgacggcagggacaaacgagtacacggacagtctgacctcc
agcaccccttcggaatcggggatctgcaggttcactgcgtctcctcccaaacctcaggat
ggagggcgggtgatgaacatggcggtcccaaaggcgcatcggccaggcgacctcatccat
ctgcctccataccttcgaatggacttcttgttaaaccggggtgctccgggcaccagcagg
gacctgagtttaggacaagcgtgcctggaacctcagaaaagtcggaccctgaagcgtccc
acggtccttgagcccatcccaatggaggcctcctcctccacgtcctccaccagagaagga
ccctcgtggcagcagggggccgtggctacattacctcagcgggaaggcgcagagctggga
caggcagttaagatgagcagctcccaagagtcactgcttgactcccggggccatttgaaa
ggaaacaatccctacgcgaaatcctacaccctggtataa
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integrated database retrieval system
