Dipodomys spectabilis (banner-tailed kangaroo rat): 122114380
Help
Entry
122114380 CDS
T07891
Symbol
Ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122114380 (Ubr1)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122114380 (Ubr1)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
122114380 (Ubr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
122114380
NCBI-ProteinID:
XP_042543463
LinkDB
All DBs
Position
Unknown
AA seq
1753 aa
AA seq
DB search
MADEETDGEERMEVSTEVPQTPQRLASQWDQQVDFYTAFLHHLAQLVPEIYFAEMDPDLE
KQEENVQMSIFTPLEWYLFGEDPDICLEKLKHSGAFQLCGKVFKSGETTYSCRDCAIDPT
CVLCMDCFQNSVHKNHRYKMHTSTGGGFCDCGDTEAWKTGPFCLSHEPGRASITKENPRC
PLNEEVIAQARKIFPSVIKYIVEMTIWEEEKELPPELQIREKNERYYCVLFNDEHHSYDH
VIYSLQRALDCELAEAQLHTTAIDKEGRRAVKAGAYASCQEAKEDIKSHSENVSQHPLHV
EVLHSEVMAHQKFALRLGSWMNKIMSYSSEFRQIFCHACLREEHGSENPCLISRLMLWDA
KLYKGARKILHELIFSSFFMEMEYKKLFAMEFVKYYKQLQKEYISDDHDRSISITALSVQ
MFTVPTLARHLIEEQNVISVITETLLEVLPEYLDRNNKFNFQGYSQDKLGRVYAVICDLK
YILISKPTLWTEKLRMQFLEGFRSFLKILTCMQGMEEIRRQIGQHIEVDPDWEAAIAIQM
QLKNILLMFQEWCACDEELLLVAYKECHKAVMRCSTNFLSSSKTVVQLCGHTLETKSYRV
SEDLVSIHLPLSRTLAGLHVRLSRLGAVSRLHEFVPFEDFQVEILVEYPLRCLVLVAQVV
AEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNKFLLLILQRYELADA
FTKTISTKDQDLIKQYNTLIEEMLQVLIYIVGERYVPGVGNVTKEEVTMREITHLLCIEP
MPHSAIAKNLPENENNETGLENVINKVAIFKKPGVSGHGVYELKEESLKDFNMYFYHYSK
TQHSKAEHMQKKRRKQENKDEALPPPPPPEFCPAFSKVVNLLNCDIMMYILRTIFERAIN
TESNLWTEGMLQMAFHLLALGLLEEEQQLQKAPEEEVTFDFYHKASRLGSSALNAQNVQM
LLEKLKGIPQLEGQKDMITWILQMFDTVKRLREKSCLMVATTSGFDSSKNDEITQDKEKA
ERKRKAEAARLHRQKIMAQMSALQKNFIETHKLMYDNTSEIPGKEDSIMEEESIPAVSDY
SRISLGPKRGPTVTEKEVLTCILCQEEQEVKIENNAMVLSACVQKSTALTQRRGKPLDLS
VETMDPLFMDPDLAYGTYTGSCGHVMHAVCWQKYFEAVQLSSQQRIHVDLFDLESGEYLC
PLCKSLCNTVIPLIPLQPQKINSENADALAQLLTLAQWIQTVLARISGYNVKHTKGESPT
IPVLFNQGMGDSTFEFHSILSFGVQSSIKYSNSIKEMVVLFATTIYRIGLKVPPDEMDPR
VPVMTWSTCAFTIQAIENLLEDEGKPLFGALQNRQHNGLKALMQFAVAQRTTCSQVLIQK
HLVRLLSVILPNLKSEETPCLLSIDLFHVLVGTVLAFPSLYWDDTVDLQPSSISSSYNHL
YLFHLITMAHMLQILLTVDTGLPLAPVEEDSEEAHSASSFLAEVSQYTNGCVGCSTPGWY
LWVALKNGITPYLRCAALFFHYLLGVTPPEELLTNSAEGEYSALCSYLSLPTNLFLLFQE
YWDTVKPLLQRWCADPILLNCLQQKSTVVRYPRKRNSLIELPDDYSCLLNQASHFRCPRS
ADDERKHPVLCLFCGTILCSQNICCQEIVNGEEVGACIFHALHCGAGVCIFLKIRECRVV
LVEGKARGCAYPAPYLDEYGETDPGLKRGNPLHLSRERYRKLHLVWQQHCIIEEIARSQE
TNQMLFGFNWQLL
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggagaccgacggtgaggagaggatggaagtcagcaccgaggtgccccag
acccctcagcggctggcatcccagtgggatcaacaagttgatttttatactgctttcctg
catcatttagcacaattggtgccagaaatttattttgctgaaatggacccagacttggaa
aagcaagaagagaatgtgcaaatgtcaatattcactccactagaatggtacttatttgga
gaggatccagatatttgtttagagaaattaaagcatagtggcgcattccaactctgtggg
aaggttttcaaaagtggagagacaacatattcttgtagggactgtgcaattgatccaaca
tgtgtactgtgtatggactgcttccagaatagtgttcataaaaatcatcgatacaagatg
catacttctactggaggagggttttgtgactgtggagacacagaggcgtggaaaactggc
cctttttgcttaagtcatgagcctggaagagcaagtattacaaaagagaatccacgttgt
ccattgaatgaagaggtaattgctcaagccaggaaaatattcccttcagtgataaaatac
attgtagaaatgactatatgggaagaagaaaaggaactgcctcctgaactgcagataagg
gagaaaaatgaaagatactactgtgtccttttcaatgatgagcatcattcctatgaccat
gtcatatacagtctgcaaagagctcttgactgtgaacttgcggaggcccagttgcacacc
actgccatagacaaagagggtcgtcgggctgttaaagcaggtgcttatgcctcttgccaa
gaagcaaaggaagacataaagagtcattcagaaaatgtctctcaacatccacttcacgta
gaagtattacactctgaggttatggctcatcagaaatttgctttgcgtcttggttcctgg
atgaacaaaattatgagctattcaagtgaatttaggcagatcttttgccatgcctgcctt
agagaagaacatggctctgagaatccctgtctcataagcaggttaatgctctgggatgca
aagctttataaaggtgcccggaagatccttcatgaattgatcttcagcagtttttttatg
gagatggaatacaaaaaactctttgccatggaatttgtgaagtattataagcaactgcag
aaggaatatatcagtgatgatcatgacaggagtatctctataactgcactgtcagttcag
atgtttactgttcctactctggctcgacatcttattgaagaacagaatgttatttctgtc
attactgaaactctgctggaagttttacctgaatacttggacaggaacaataaattcaac
ttccagggttatagccaagacaaactgggaagagtatatgcagtaatatgtgacctaaag
tatatcctgatcagcaaacccacactatggacagaaaaattaagaatgcagttcctggaa
ggatttcgatcttttttgaagattcttacctgtatgcagggaatggaagaaatcagacga
cagatcgggcagcacatagaagtggatcctgactgggaggctgctatcgctatacagatg
caattaaagaacattttactcatgtttcaggagtggtgtgcttgtgatgaagaactctta
ctagtggcttataaggaatgccacaaagctgtgatgaggtgcagtacaaatttcttatct
agcagcaagacagtagtacaattgtgtggtcatactctggaaaccaagtcctacagagtg
tctgaggatcttgtgagcatacatctgccactttctaggactcttgctggtcttcatgtg
cgcttaagccggctaggtgctgtttcaagactgcatgaatttgtgccttttgaggacttt
caagtagagatactagtggaatatcctctgcgttgtctggtgttggtcgcccaagttgtt
gctgagatgtggcgaagaaatggactctccctcattagccaggtgttttattaccaagat
gttaagtgcagagaagaaatgtatgataaagatatcatcatgcttcagattggagcatct
ttaatggatcccaacaagtttttattacttatacttcagaggtatgaacttgctgatgct
tttaccaagactatttccacaaaagaccaggatttgattaagcagtataatactttaata
gaagaaatgcttcaggtcctcatctacattgtgggagagcgttatgtacctggagtggga
aatgtgaccaaagaagaggtcacaatgagggagattactcacttgctgtgcattgaacca
atgccacacagtgctattgccaagaacttacctgagaatgaaaataatgaaactggcttg
gagaatgtgataaacaaagtggccatatttaaaaaaccaggcgtatcaggccatggagtt
tatgaactgaaagaagaatcattgaaagacttcaacatgtacttttatcattactccaaa
acacaacatagcaaggccgagcacatgcagaagaaaaggagaaaacaagaaaataaagat
gaagcattgccaccaccaccacctcctgagttctgccctgctttcagcaaagtcgtcaac
cttctcaactgtgatattatgatgtacatactcagaaccatatttgagcgggcaatcaac
acagaatctaacttgtggacagaagggatgctccaaatggcattccatcttctggcatta
ggcttactagaagaggagcagcagcttcaaaaagctcctgaagaagaagtgacatttgac
ttttatcataaagcttcaagattgggaagttcagccttgaatgctcagaatgtacaaatg
cttttggaaaagctcaaaggaataccccagctggaaggtcagaaggacatgataacatgg
atactccagatgtttgacacagtgaagcgactgagagaaaaatcttgtttaatggtagca
actacttcaggatttgactccagtaagaatgacgagattactcaggataaagaaaaagca
gaacgaaaaagaaaagccgaagctgctaggctacaccgccaaaagatcatggctcagatg
tctgccttacagaaaaactttatcgaaactcacaaactaatgtatgacaatacatcagaa
atacctgggaaggaagactccattatggaagaagaaagcatcccagcagtcagcgactac
tctagaatttctttgggtcctaaacgggggccaactgttactgaaaaggaggtgctgaca
tgcatcctctgccaggaagaacaagaggtgaaaatagaaaataatgctatggtattatca
gcctgtgtccagaaatccactgccttgacccagcgcaggggaaaacccctagacctctca
gtagaaaccatggacccactcttcatggatccagacttggcctatggaacttacacagga
agctgtgggcatgtcatgcatgccgtgtgctggcagaagtattttgaagctgtgcagctg
agctctcagcagcgcattcatgttgatctttttgacttggagagtggagaatatctttgc
cctctttgcaagtctctgtgcaatactgtgatccctcttattcccttgcaacctcagaag
ataaacagtgaaaatgcagacgctctggctcaacttttgaccttggcacagtggatacag
actgttctcgccagaatatcaggttataatgtgaaacacactaaaggagaaagcccaacc
attcctgtcttatttaatcaaggaatgggcgattccacttttgagtttcattccatcctg
agttttggagttcagtcatcgatcaagtattctaacagtatcaaggaaatggtggttctc
tttgccacaacgatttatagaattgggctgaaagtgcctcctgatgaaatggatcctcga
gtccctgtgatgacctggagcacatgtgctttcactattcaagcaattgaaaacctattg
gaagatgaaggaaaacctctgtttggagcacttcaaaataggcagcacaatggtctgaaa
gcattgatgcagtttgcagttgcacagaggactacctgttctcaggtcctgatacagaaa
catctggttcgcctactgtcagttattcttccaaacctaaaatcagaagaaacaccatgc
cttttgtctatagatctgtttcatgttttggtaggtactgtgttagcattcccgtccttg
tactgggatgacactgttgatctgcagccttcatcaattagttcttcctataaccacctt
tatctcttccatttgatcaccatggcacacatgcttcagatacttcttacagtggataca
ggcctccctctggccccagttgaagaagacagtgaagaggctcattctgcatcctctttc
cttgcagaagtttcacaatatacaaatggctgcgttgggtgtagtactcctggctggtat
ttgtgggtcgcattgaagaatggcatcactccttaccttcgctgcgccgcgctcttcttc
cactacttacttggggtaactccgcctgaagaactgcttaccaattctgcagaaggagag
tacagtgcattatgtagctatctatctttacctacaaatttgttcctgcttttccaggaa
tattgggatactgtaaaacctttgcttcagaggtggtgcgctgatcctatcttactcaac
tgtttacagcagaaaagcactgtggtcaggtaccctagaaaaagaaacagtttgatagag
cttcctgatgactacagctgcctcctaaatcaagcttctcatttcaggtgtccacggtct
gcggatgatgaacgaaagcatccggttctctgtcttttctgtgggaccatcctgtgctct
cagaacatttgctgccaagaaattgtgaatggggaagaggttggagcttgcatttttcat
gcacttcactgtggagcaggagtctgcattttcttgaaaatcagagagtgcagagtggtc
ctggttgaaggtaaagcccgaggctgtgcctatccagccccttacttggatgaatatgga
gaaacagaccctgggctaaagaggggcaatccccttcatttatctcgtgagcgatatcgg
aagctccatctggtctggcagcaacactgcattatagaagagattgccaggagtcaggaa
acgaaccagatgttatttggattcaactggcagttgctgtga
DBGET
integrated database retrieval system
