Dipodomys spectabilis (banner-tailed kangaroo rat): 122114423
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Entry
122114423 CDS
T07891
Symbol
Nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp05014
Amyotrophic lateral sclerosis
dsp05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122114423 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
122114423 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122114423 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122114423 (Nup98)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122114423 (Nup98)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122114423 (Nup98)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122114423 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
122114423
NCBI-ProteinID:
XP_042543523
LinkDB
All DBs
Position
Unknown
AA seq
1815 aa
AA seq
DB search
MFNKSFGTPFGGSTSGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGSLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTSNSLFGSSSTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYRANRKGPQNQVGAGTTAGLFGSSPATSSATGL
FSSSTTNSGFAYPNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTPFS
FGNTSTLGQPSTNTMGLFGVTQASQPGSLFGTATNTSTGTAFGTGTGLFGQTNTGFGAVS
STLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGSSIFG
SKPAPGTLGTGIGTGGFGTALGPGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFG
APQAPVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTSKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNRDSEDLASPSEYPENGERFSFLSKPVDENHQQDGDEDSLVSHFYT
NPIAKPIPQTPENVGNKHNSNSVDDTIVALNMRVALRNGLEGSSEETSFHDESLQDDREE
IENNSYHMHPAGIVLTKIGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDV
NLTNLNLDDIVHIRRKEVIVYLDDTEKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPD
RLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPSKTSS
KKLKTAPLPPAGQTTPFQMALNGKPASPPQTQSPEVEQLGRVVELDSDMIDITQEPVLDS
VLEEGMPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDSMDQRFGHLPAKGDI
AQEVCSPRLPISASHSSKSRSIVGGLLQSKFASGVFLSPSASVQECRIPRASSMMNISSP
SPWSVPPPLTTVFTVPSPSPEVQLKTVGTRRQLGLVPLEKSVTYGKGKLLMDMALFMGRS
FRVGWGPNWTLANSGEQLNSSHELESHQATDSMEYGFLPNPVAVKSLTESPFKVHLEKLS
LRQRRLDEDLQLYQTPLELKLKRSTVHVDELCPLIVPNAGVEVIHDYANWVKEASRDVLE
AQIVKPWSLTWTLCEALWGHLKELDNQLDEPIEYIQILERRRAFSRWLSHTAAPQIEEEV
SLTRKDNPIEAVFSYLTGNRISEACSLAQHSGDHRLALLLSQLVGSQSVRELLTMQLADW
HQLQADCFIQDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTASI
SRALSMYEEAFQNTSEGDRYACSPLPSYLEGSGCLIEEEQDSQRPLQDVCFHLLKLYSDR
HYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGLW
EWAIFVLLHIENSSMREKAVRELLTRHCQLVETPESWAKETFLTQKLCVPAEWIHEAKAV
RAHMESDKHLEALYLFKAGHWNRCHKLVIRHLASDAIINENYDFLKGFLEDLAPPERSSL
IQDWETSGLVYLDYIQVIEMLHHIQQVDCSGYELEKLHTKVTSLCNRIEQIQCHNAKDRL
AQSDMAKRIANLLRVVLSLQHVPDATSESTPDPQRVPLRLLAPHIGRLPMPEDYALDELR
SLTQSYLRELTVGSQ
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaaccccctttgggggtagtacaagtggctttggtacaaca
tcaacatttggacaaaacactggctttggcaccactagcggaggggcatttggaacatct
gcatttggttctagcaacaatactggaagcttatttggaaattcacagaccaaaccagga
ggattatttggtaccagttcatttagccagccagctacctccacaagcactggttttggg
tttggtacatcaacaggaacatcaaatagcttgtttggatcttcaagtacagggaccagt
ctcttctcatcccaaaacaatgcctttgcacaaaataaaccaactggctttgggaatttt
ggaacaagtacaagcagtgggggactcttcggaacaacaaataccacctctaatcctttt
ggtagtacctcaggctccctttttgggccaagtagttttacagcagcacctactgggact
accattaaatttaatcctccaactggtacagatactatggttaaagctggagttagcacc
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtcacta
gaggaacttcgtttagaggattatcgggctaaccggaaaggtccgcagaatcaggtggga
gcagggaccacagctggcttatttggatcttcaccagccacctccagtgcaactggactc
ttcagctcctccaccactaattcaggctttgcatatccgaacaaaactgcctttggaact
agtacaactggatttggaacaaatccaggtggtctctttggccagcagaatcaacagact
accagcctcttcagcaaaccatttggccaggccacaactacccagaacactcccttttcc
tttggtaacaccagcacccttggacagccaagtactaataccatgggtttatttggagta
acccaagcctcacagcctggaagtctttttggaacagctacaaacaccagcactgggact
gcttttggaacaggaacaggtctctttgggcagaccaatactgggtttggtgcagttagt
tcgaccctgtttggcaataacaagcttactacatttggaaccagtacaaccagtgctcct
tcatttggtacaaccagtggcgggctctttggtaacaaaccaaccctgactttaggaacc
aatacaaacacttccaattttggttttggcacaaataccagtgggagtagtatttttgga
agtaaaccagcacctgggactctgggaactggtattggtacaggaggatttggaacagct
cttggtcctggacaggcatctttgtttgggaacaaccaacctaagattggagggcctctt
ggtacaggagcctttggagcccctggatttaatactacaacagccactttgggctttggt
gccccccaggctccagtagccttgacagatccaaatgcttctgctgctcagcaggctgtt
ctccagcagcatctcaatagtctaacatattcaccttttggagactctcctctcttccgg
aatcccatgtcagaccccaagaagaaagaagagagattaaagccaacaaatccagcagcc
cagaaggctcttactacacctactcattataaactgacacctcgacctgctaccagagtc
cgaccaaaggctctgcaaacaacaggcacatccaaatcccatctgtttgatgggcttgat
gatgatgaaccatcccttgcgaatggagcattcatgcccaagaagagcattaagaaatta
gttttgaagaaccttaacaacagcaatctcttttctcctgttaatcgagattcagaagat
ctagcttcaccatctgaatatccagaaaatggagagagatttagtttcctgagcaaacct
gttgatgaaaaccatcagcaggatggagatgaagattctcttgtatcccatttttacact
aaccctattgccaaaccaattcctcaaactccagagaatgttggcaataaacacaacagc
aacagtgtggatgataccattgttgcactgaacatgcgagttgctttgcgaaatggccta
gaaggaagtagtgaagaaacttccttccatgatgagtcactgcaagatgaccgagaggaa
atagaaaataattcttaccatatgcatccagcaggcattgttctcactaagattggttac
tatactattccatctatggatgaccttgctaaaattacgaatgaaaaaggagaatgcatc
gtctctgacttcactattggtcgtaaaggttatggctcaatctatttcgaaggagatgtg
aatttaacaaatctaaatttggatgacattgtgcatatccggaggaaagaagttattgtc
tacttagatgataccgaaaaaccacctgtgggtgaagggctgaatagaaaggctgaagtt
acattggatggagtttggccaacagataaaacatcacgttgtttaataaagagtccagat
agacttgctgacatcaactatgagggaagattggaagcagtttcaaggaaacagggagcc
caattcaaggagtaccggcctgaaactggttcttgggtgtttaaggtctcccatttttcc
aaatatggccttcaggattctgatgaagaggaggaagaacacccatccaaaactagttca
aagaagttgaagactgcccctttgcctcctgcaggccagactacccctttccagatggct
cttaatggcaaacctgcatctccacctcagactcagagcccagaggtggaacagttaggg
agggttgtggagctggacagtgacatgatagatattacccaggagccagttttggattct
gtgttagaagaaggcatgcctgaggatcaagaacctgtgtctgcttcaacacatattgca
tcttcactgggaattaatccgcatgtcttacagattatgaaagcatcattgcttgctgat
gaagaagatgtagactccatggatcaacgctttggtcatcttcctgccaaaggagatatt
gctcaagaagtctgttctccccgactccccatttcagcatcccattcatcaaaatcccgt
tcaatagttggtgggttactacaatcaaaatttgcaagtggcgtttttctttcaccaagt
gcctctgtgcaagaatgtcgaattcccagagcatcatctatgatgaatatctcatcccct
tctccttggtctgtccctccacccctgaccacagtgtttacagtgcccagtccaagtcct
gaggttcagctcaagacagtgggaacacgcagacaactaggcctagtccctcttgaaaag
tctgtcacgtatggcaagggaaaactcttgatggacatggccctattcatgggacgctca
tttcgagttggttggggccctaactggactcttgctaatagtggagaacagctgaatagc
tctcatgaactggaaagtcatcaggctaccgattctatggaatatggattcttgcccaat
cccgtagctgttaaatccctgacggaatccccattcaaagttcatttagaaaaactcagt
ttgagacaaaggagactggatgaagatctgcaattatatcagacacctctggagctcaaa
ttaaaacgtagcacagtccatgtggatgaactgtgtcctctcattgtccccaatgcggga
gttgaggtcattcatgattatgctaactgggttaaggaagcatccagagatgtattggaa
gcacaaattgtgaagccctggagcctcacatggacattatgtgaagccctatggggtcac
ctgaaggaacttgacaaccagctagatgagcccattgaatacattcagattctggaacga
agaagagctttttctcgctggctatcccatactgctgcacctcagattgaagaagaagtt
tccttaacccgaaaagacaaccctatagaggctgtcttcagctacctcacaggcaacagg
atcagtgaggcctgctctcttgcacagcattcaggggatcatcgccttgcccttctttta
tctcagttggtgggtagccagtcagtccgggagctactcaccatgcagctggctgattgg
catcagctccaggctgactgtttcatccaggatgagagattgcgcatctttgccctcttg
gctggaaaaccggtatggcagctctcagagcagaagcaaatcaatgtgtgctctcagctg
gattggaaacgttcccttgctgtacatctttggtatttgcttccaccaacagcctctatt
tccagagcactcagcatgtatgaagaagcatttcagaatacttctgagggtgacaggtat
gcctgttccccgcttccttcatacctagagggttctggctgtttgatagaggaggagcaa
gactcgcagagaccacttcaagatgtttgttttcaccttctaaaactctacagtgacaga
cattatgatctcaatcagctgttggagcctcgaagcataactgcagatcctttggactat
cgcctaagctggcacttgtgggaagtgctgcgggctcttaattatacccatctctcagag
cagtgtgagggtgtgctgcaagccagttatgctggccaactggaaagtgagggtctctgg
gagtgggccatctttgttctcctgcacattgaaaactcaagcatgcgcgagaaggctgtt
cgagagctgcttacccggcactgccagctggtggagacccctgaatcttgggctaaggag
acattccttacccagaaactttgtgtacctgctgagtggattcatgaggccaaagctgtg
cgagcccacatggaatctgataagcatttagaggctctctatttgtttaaagctggtcac
tggaaccgctgccacaaacttgtcatccgacacttagcttctgatgccatcattaatgag
aactatgactttctgaagggttttttggaagacctggcacctccagaacgcagtagccta
attcaggactgggaaacatctgggcttgtttacctggactatattcaagtcattgaaatg
ctccatcatattcagcaggtggattgctcaggttatgaactagagaagttacataccaaa
gtgacgtcactgtgcaaccgcatagaacagatccaatgtcacaatgccaaggatcgtcta
gctcaatcagacatggccaagcgtatagccaatttgctgcgagtggtactgagccttcag
catgtccctgatgcaacttcagaatcaacaccagaccctcagcgagtccctttacgccta
ctggctccacacattggccggctgcccatgcctgaggactatgccttggatgaactgcgc
agtctcacacagtcctatctgcgagaactgactgttgggagccagtga
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integrated database retrieval system
