Dipodomys spectabilis (banner-tailed kangaroo rat): 122114449
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Entry
122114449 CDS
T07891
Symbol
Snx1
Name
(RefSeq) sorting nexin-1
KO
K17917
sorting nexin-1/2
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122114449 (Snx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122114449 (Snx1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
122114449 (Snx1)
Membrane trafficking [BR:
dsp04131
]
Endocytosis
Macropinocytosis
Sorting nexins
122114449 (Snx1)
Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122114449 (Snx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
MVD-like_N
HR1
DUF2043
Motif
Other DBs
NCBI-GeneID:
122114449
NCBI-ProteinID:
XP_042543546
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MASGGGGCSASERLPPPFPGLDPESEGAGGGSEPEAGDSDTEGEDIFTGAAAASKPQSPK
SVSSLFPINNGSKENGFHEEQDQEPQDLFADATVELSLDSTQNNQKKGPAKMLISPPPQE
AANSAKPQPSYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSKQ
FAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRA
ALERYLQRVVNHPTMLQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTI
KMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVTHRKELALNTAQFAKSLAMLGSSEDN
TALSRALSQLAEVEEKIEQLHQEQANHDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRW
QDAQATLQKKREAEARLLWANKPDKLQQAKDEITEWESRVTQYERDFEKISTVVRKEVIR
FEKEKSKDFRNHVIKYLETLLYSQQQLAKYWEAFLPEAKAIS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggaggtggtggctgtagcgcttcggaaagactccccccgcctttcccgggt
ctggatccggagtcggagggggccggcggggggtccgagcccgaagctggggacagcgac
accgagggggaggacatcttcaccggcgccgcggcagccagtaagccccagtctccaaag
agcgtttcatctctttttcccatcaacaatggctccaaagaaaatgggtttcatgaggaa
caagaccaagaaccacaggatctctttgcagatgccacagtggaactgtccctggattct
acacaaaataatcagaagaaagggccggccaaaatgctcatttctcctcctccacaggaa
gccgcaaattctgccaagccccagccaagctatgaggagctagaggaagaagagcaagaa
gaccagtttgacttgacagtaggtattactgatcctgagaagataggggatggtatgaat
gcctacgtagcctacaaagttaccacacagacaagcttaccgatgttcagaagtaaacag
tttgcagtgaaaagaagatttagtgactttctgggtctttatgagaagctttcagagaag
cactctcagaatggctttattgtccctcctccacctgaaaagagcctaataggcatgaca
aaagtaaaagttggaaaggaagattcttcttctgcagaatttctcgaaaaacgaagggct
gctctggaaaggtaccttcagagagttgtgaaccaccccaccatgttacaggaccctgat
gtccgagagtttttagaaaaagaagagctgccacgtgctgtgggtacccagacattgagt
ggcgctggtctccttaagatgttcaacaaagctacagatgctgtaagcaaaatgaccatc
aagatgaatgaatcagacatttggtttgaggagaagctccaggaggtagaatgtgaggaa
cagcgcctgcggaaactgcatgctgtggtagaaactctcgtcacccacaggaaagagctt
gcactgaacacagcccagttcgctaagagtctagccatgctcgggagctccgaggacaac
acggccctgtcacgggccctctcccagctggctgaggtggaagaaaaaattgagcagctg
caccaggaacaggccaaccatgacttctttctgcttgctgagctcctgagtgactacatt
cgcctcctggctatcgtccgtgctgcctttgaccagcgcatgaagacatggcagcgctgg
caggatgctcaggccaccctgcagaagaagcgggaggccgaagcgcggctgctgtgggcc
aacaagcctgacaagctgcagcaggccaaggatgagatcacagagtgggagtctcgggtg
actcagtacgaaagggactttgaaaagatttccacagtggtccggaaagaagtcatacgg
tttgagaaagagaaatccaaggacttcagaaaccacgtgatcaagtatcttgagacactc
ctatattcccagcaacagctggctaagtactgggaagccttccttcctgaggcaaaggcc
atctcctaa
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