Dipodomys spectabilis (banner-tailed kangaroo rat): 122114490
Help
Entry
122114490 CDS
T07891
Symbol
Myo5c
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vc
KO
K10357
myosin V
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122114490 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122114490 (Myo5c)
04131 Membrane trafficking [BR:
dsp04131
]
122114490 (Myo5c)
03029 Mitochondrial biogenesis [BR:
dsp03029
]
122114490 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dsp04812
]
122114490 (Myo5c)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122114490 (Myo5c)
mRNA cycle factors
P-body specific factors
122114490 (Myo5c)
Membrane trafficking [BR:
dsp04131
]
Others
Actin-binding proteins
Myosins
122114490 (Myo5c)
Mitochondrial biogenesis [BR:
dsp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122114490 (Myo5c)
Cytoskeleton proteins [BR:
dsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122114490 (Myo5c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Csm1_N
AAA_22
AAA_16
nSTAND3
DUF5382
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
122114490
NCBI-ProteinID:
XP_042543616
LinkDB
All DBs
Position
Unknown
AA seq
1740 aa
AA seq
DB search
MAVAELYTQYNRVWIPDPEEVWKSAEIAKDYRAGDKVLRLLLEDGTELDYPVDPGSLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSKAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEVSFDKSNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLRSAEEFHYTSMGGSTLIEGVNDR
ADMVETQKTFALLGFKEDFQMDVFTILAAILHLGNVQIAGVGSERSSISEDDDHLKVFCE
LLGLARGKVSQWLCNRKIVTSSETVVKPMTRAQASNARDALAKKIYAHLFDFIVEKINEA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRESKFQLCANFFQENPVPSSPF
GSMITVRSAKQIVKPNSRHFRTTVGSKFRSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGILMTQPELSFGDKKEVCKVV
LHRLIQDSNQYQFGKSKIFFRAGQVAYLEKLRLDKLRQGCIVIQKHVRGWLQRKKFLRER
HAAVTIQQYFRGQQTVRKAITARALKEAWAAIIIQKHCRGYLVRNLYQLIRIATITIQAY
ARGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNRENHGLVEKLTSLAALRAGDVEKVQRLEAELERAAIYRHSCEEKDRRYRDTVEEKLAR
LQKRNSELEAEQEQTQLKLREKTEELQEKMDALTKQLFDDVQKEERQRILLEKNFELKTQ
DYEKQMQCLKEEIKALKEEKMQLCHQLEEERVTSEGLRGDVARLSKQAKTISEFEKEIEL
LQAQKIDVEKHVQSQKREMREKMSEITRQLLESYDVEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVMENHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHQ
VTRLTSENMMIPDFKQQISELEKQKQDLELRLNEQNEKMKGKLEELSAQLPHSREEEGTQ
RKAIEAQHEAHLRVKEQLLGTIQALQEAGEHSKAGQSEAEGEVSNSQKXALTLENRNLEE
ELDTKDRVIKKLQDQVKNLAKTVDKANARPLSSGPKEFLGMLEYRREDEPKLIQNLILDL
KPRGVVVNMMPGLPAHILFMCVRYADALNDASMLKSLMNSAINGIKQVVKEHLEDFEMLS
FWLSNTCHFLNCLRQYSGEEEFMKHNSPRQNKNCLNNFDLSEYRQILSDVAIRIYHQFIT
VMENNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTITSILQQLSYFYTTM
CQNGLDLELLRQAVKQIFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNL
QKSIAKETLEPLSQAAWLLQVKKTTDSDAKEICERCTSLSAVQIIKILNSYTPIDDFEKR
VTPSFVRKVQALLNNRGDSSQLMLDTKYLFQVTFPFAASPHALELIQIPSSFKLGFLNRL
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctgtacacacagtacaacagggtttggattccggatcctgaagaa
gtttggaagtctgccgagatagccaaggactaccgagctggtgacaaagtcctgcggctc
ctgctggaggatggcacggagctggattatcccgtggacccaggctcactgcctccactt
cggaaccccgacatccttgtgggcgagaacgacctcacggccctcagctacctccacgag
cccgccgtgctccacaaccttcgcatccgctttgcagagtccaagctcatctatacctac
agcggaatcattttggtggccatgaacccctacaagcagctgcccatctacggagacgcc
atcatccacgcctacagcgggcagaacatgggcgatatggatccgcacatattcgcagtg
gcagaagaggcctacaagcagatggccagaaaccatcgtaaccagtccattattgtgagt
ggagagtcaggtgcagggaagacggtgtcagcccgctatgccatgaggtacttcgccacc
gtcagcaaatcgagcagcaaggctcacgtggaggacaaggtcctagcatccaatcccata
accgaggctgtggggaatgctaagaccacgcgcaatgacaacagcagtcggtttgggaag
tacacagaagtcagcttcgacaagagcaatcagatcataggggccaacatgagaacctac
ctgctggagaaatccagagttgtcttccaatcagaaaatgaacggaattatcacattttc
taccagctgtgtgcatctgcacagcagtcggagtttaaacatcttaaactaaggagtgca
gaagagtttcactacacgagcatgggaggcagtacactcatcgagggtgtgaatgacaga
gcggacatggtagagactcagaagacatttgcactcttgggtttcaaggaggattttcag
atggatgttttcaccatcctggccgccatcctgcatctgggcaacgtgcagatcgccggg
gtgggcagcgagcggtcttccatcagtgaggatgacgatcacttgaaggtattctgcgag
ctcctgggcctggcgcgtggcaaagtgtctcagtggctctgcaaccgcaagatcgtcacc
agctctgagaccgtggtgaaacccatgaccagagcccaggccagcaacgccagagacgcg
ctggccaaaaagatctacgcgcacctgttcgacttcattgtggagaaaattaacgaagcc
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgag
acctttgatgtgaacagctttgaacagttctgcatcaattacgctaatgaaaagctgcaa
cagcagtttaacctgcatgtctttaaactcgaacaagaagaatacatgaaggaagatatc
ccttggactctgatcgatttttatgacaatcagccagttattgacctgatagaagcgaaa
atgggcattttggagttactggatgaagaatgcttgttaccacacgggacggatgaaaat
tggcttcaaaagctgtataataattttgtcaacaagaactctttatttgaaaaacctaga
atgtcaaacacatcttttatcatccagcactttgctgataaggtggagtataaatgtgaa
ggctttcttgagaagaacagggacactgtctacgacatgctagttgaaatcctgagggaa
agcaagttccaactgtgcgccaacttttttcaagaaaatcccgttccttcttcccccttc
ggttcaatgatcacagttagatccgcaaagcagatcgtcaagcccaacagcaggcatttc
cggaccacagttggaagcaagttccgcagctccctgtccttgctcatggagaccctcaac
gccaccacaccccactacgttcgctgcatcaagccaaatgatgagaagttgcctttcgag
tttgactccaaaaggattgtccagcagctacgagcctgtggtgttttagaaacgattcgc
atcagtgcccagagctacccatccaggtggacatacattgagttctacagccgctacggc
atcctcatgacccagccggagctctcctttggtgacaaaaaggaagtgtgcaaggtggtc
ttgcacaggctcatccaggattccaatcaataccagtttggcaaaagcaagattttcttc
cgagctggacaagtggcttacctagagaaactccgattggataaactgaggcagggctgt
attgtgatccaaaagcacgtccgtggctggctacagaggaaaaagttcctccgggagaga
cacgctgctgtgactatccagcagtacttccggggccagcagactgtgaggaaagccatc
accgcaagggctttgaaggaggcctgggcagccatcatcatccagaagcactgccgtggg
tacctggtccgcaacctgtaccagctgatccgcatagccaccatcaccatccaggcgtat
gcccggggcttcctggcgaggaggaggtaccggaagatgctggaggagcacaaggctgtg
atccttcagaaatacgcccgggcgtggctggcccgccgaagattccagaacatccgacgt
ttcgtgctcaacatccagctgacttacagggtccagcgtttgcagaagaagctggaggat
cagaacagagagaaccacgggctggtggagaagctgaccagcctggctgctctccgggct
ggcgacgtggagaaggttcagaggctggaggcagagctggaaagagcagccatctacaga
cacagctgcgaggagaaggaccggagatacagggacactgtggaagagaaactggccagg
cttcagaagcgtaattccgaactggaagctgagcaggagcagacccagctgaagctccgc
gagaagacggaagagctccaagaaaaaatggatgccctcaccaagcagctctttgacgac
gtgcagaaagaagagcggcaaaggatactgctggagaaaaattttgagctaaagacacaa
gactatgagaagcagatgcagtgtctgaaggaagaaatcaaggctctcaaggaggagaaa
atgcagctctgtcaccagctcgaggaagagcgggtcacctctgagggcttgaggggcgat
gtggcccgactgagcaagcaagcaaagaccatctctgagtttgagaaggagatcgagctg
ctccaggcacagaagatcgacgtggagaaacacgtgcagtcgcagaaacgggagatgaga
gaaaagatgtcagagattaccagacagcttctcgagagctatgatgtcgaagatgtacga
agcagactctctgtggaagatctggaacatttaaatgaggatggtgaactctggtttgca
tacgagggactaaagaaggcgacacgagttatggaaaaccatttccaatcccagaaggat
tgctacgaaaaagagatcgaagccctgaacttcaaagtggtacatctcagtcaagaaatc
aaccatctgcagaaattattcagagaggaaaatgacatcaatgaaagcatccggcaccaa
gtcaccaggctgacatcagaaaacatgatgatcccagactttaagcagcaaatttcagag
ctagagaagcagaagcaagatcttgaactccgcctgaatgaacaaaatgagaaaatgaaa
ggaaaactggaggaactgtcggctcagctccctcacagcagagaagaggaaggaactcag
agaaaggccatagaagcccagcatgaagcacacctcagagtgaaagagcagcttctgggc
acgatccaggcactgcaggaggctggagagcactcgaaggcagggcaatccgaagctgaa
ggcgaagtgagtaattcccagaagnnggcgctcactctggaaaacaggaatctggaagag
gagttagacacgaaggacagagtgattaaaaagctgcaagaccaagtgaagaatctggcc
aaaaccgtggataaagccaatgccaggcccttgtcctcgggacccaaggagttcctgggg
atgctggaatacagaagagaagatgagcccaagctcattcagaacctcatccttgacttg
aagccccgcggcgtggtggtgaacatgatgccggggctgccggctcacatcctgttcatg
tgtgtccgctacgcagacgccctcaacgacgccagcatgctcaagtccctcatgaacagc
gccatcaacggcatcaagcaggtggtgaaggaacatctagaagactttgagatgctgtcc
ttttggctttccaatacttgtcatttccttaactgcctcaggcagtatagtggtgaagag
gaattcatgaaacataacagcccccgtcagaataagaattgcctgaacaattttgacctt
tcggaatacagacagattcttagtgatgtggctatacggatatatcatcagttcattact
gtaatggaaaataacatccaaccaataatagtgccgggcatgctggagtatgaaagcctg
cagggcatctcgggcctgaagcccacgggcttccggaagcgctcgtccagcattgatgac
acagatgcctataccatcacctccatcctgcagcagctcagctacttctacaccaccatg
tgccagaacgggctggacctggagctgttgaggcaggccgtgaagcagatattcttcctg
atcggcgctgtcaccctgaacagcctcttcctgcgcaaggacatgtgttcatgcaggaag
gggatgcagatcaggtgcaacatcagctacttggaagaatggctcaaagacaagaatctg
cagaagagcatagccaaggaaacgctggagcccctctcccaggcagcatggttgctccag
gtcaagaagacgacggacagcgacgccaaggagatctgtgagcgctgcacctcgctgtct
gccgtgcagatcataaagatcctgaattcctacacgcccatcgacgacttcgagaagaga
gtcactccatcctttgtccgcaaagtacaggctctcctgaataaccggggcgactcatca
cagctgatgctggacaccaagtacctctttcaggtcacctttcccttcgccgcctctcca
cacgcgctggagctgatccagatccccagcagtttcaagctaggttttctcaaccgattg
tag
DBGET
integrated database retrieval system
