KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122114924
Entry
122114924         CDS       T07891                                 
Symbol
Nxf3
Name
(RefSeq) nuclear RNA export factor 3
  KO
K14284  nuclear RNA export factor
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03008  Ribosome biogenesis in eukaryotes
dsp03013  Nucleocytoplasmic transport
dsp03015  mRNA surveillance pathway
dsp05014  Amyotrophic lateral sclerosis
dsp05164  Influenza A
dsp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122114924 (Nxf3)
   03015 mRNA surveillance pathway
    122114924 (Nxf3)
   03008 Ribosome biogenesis in eukaryotes
    122114924 (Nxf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    122114924 (Nxf3)
   05168 Herpes simplex virus 1 infection
    122114924 (Nxf3)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122114924 (Nxf3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsp03019]
    122114924 (Nxf3)
   03009 Ribosome biogenesis [BR:dsp03009]
    122114924 (Nxf3)
Messenger RNA biogenesis [BR:dsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122114924 (Nxf3)
   mRNA cycle factors
    Stress granule specific factors
     122114924 (Nxf3)
Ribosome biogenesis [BR:dsp03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    122114924 (Nxf3)
SSDB
Motif
Pfam: NXF_NTF2 Tap-RNA_bind LRR_NXF1-5 NTF2
Other DBs
NCBI-GeneID: 122114924
NCBI-ProteinID: XP_042544128
LinkDB
Position
Unknown
AA seq 513 aa
MEARGRRYIPYAIPSYRQRIYSNKQNQTQINMVEGQNPPERRIQKTEQDVNFESWFKVTI
PFGIKYDEEWLLNLIQSQCSVPFTPVEFRYEKMQAQFFVNNASTAFELKKISDKLLDNNN
ERISIFISASDVPHSLQKEVKSEKMEQPRMNKGYDVSQQDLNIYSNSFNRDMATYNTKMI
SLNPGKYVTTTLTTHEENISKMETSVEIEKGKGQTPEEMHAESDSFCTTFPDNSTSMNSI
LELFPKLLCLDGQASSRPPVFNTETHKKLPTCKGSYFGSEMLKDLILQFLQQYYTIYDYG
DRQGLLDVYHEEACFSLTITHNFKEQAPSNLCDYLKYSRNMKNLKDPYVQRQLLKHRKCD
IVNSLKVLPKTQHDLNSFVVDTWFQTEKMLCFSVSGLFKEVEGNSQGCVHVFTRTFITTH
SSSSSLCIVNDKLFLSARPQEMENACSIPMLLPSGSEMAISQEQQMMQAFFTKSRMKWSE
KDCQTNYLDYSRVVQALPHPKSKQQSQEPEHRK
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggaagcccgtggaagaagatacattccttatgccatcccatcctatcgtcagagaatc
tattcaaacaaacaaaaccaaacccaaattaacatggtggaaggccaaaaccctccagag
agaagaattcagaagacagaacaggatgtgaactttgagagctggtttaaggtcacaatt
ccatttggcataaaatatgatgaggagtggctgctaaatttgattcagagccaatgcagt
gtccctttcactccagtcgagtttcgctatgagaaaatgcaagcccagttctttgtcaat
aatgccagcactgcctttgaactgaagaagatcagtgacaagcttttggacaacaataat
gaaaggatctcaatctttatcagcgcctctgatgtacctcactctctgcagaaggaggta
aagtcagaaaagatggaacagccaagaatgaacaaaggatatgatgtgtcccagcaagat
cttaacatctacagtaactcatttaaccgagacatggcaacttataatacaaaaatgata
tcactgaatcctggaaagtatgtgactactaccttaactactcatgaagagaacatatcc
aagatggagacttcagtagagattgagaaggggaaaggccaaacaccagaagagatgcat
gcagaatcagactctttctgcaccaccttcccggataattccaccagcatgaactccatc
ctggaattgtttcccaagttattatgcctggatggccaggcatcatctagaccacctgtc
tttaacactgaaactcacaagaagttaccaacttgcaagggaagttactttggatctgaa
atgctaaaggatctgatcctacaatttctgcaacaatactacacgatctatgactatgga
gatcgacagggtcttcttgatgtttaccatgaagaggcctgtttctccctaaccattacc
cacaacttcaaggaacaagctccaagcaatctctgtgactatttgaagtacagcaggaat
atgaagaatctcaaggatccatatgtgcagaggcagctgctaaagcacaggaaatgtgac
attgtaaactctctcaaagtgttgcccaaaacccaacatgatctcaattcatttgtggtg
gatacttggttccagacggaaaagatgctctgcttctctgtcagtggcctgttcaaggaa
gtggaaggaaattctcagggatgtgttcatgtcttcactcggaccttcatcactacccat
agcagcagttcaagcttatgcatcgtcaatgacaagctatttttgagtgccaggccccaa
gagatggaaaatgcttgctccattcccatgctattgccctcaggctctgagatggcgatt
tcccaggagcagcaaatgatgcaggcattcttcaccaagtctaggatgaagtggtctgag
aaggactgtcagaccaactacttagactacagtagagttgtacaagctctgccacatcct
aagagtaaacagcagagtcaagagcctgaacatagaaaatga

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