Dipodomys spectabilis (banner-tailed kangaroo rat): 122115039
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Entry
122115039 CDS
T07891
Symbol
Gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsp03021
]
122115039 (Gtf3c3)
Transcription machinery [BR:
dsp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
122115039 (Gtf3c3)
TFIIIC, fungi type
122115039 (Gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_8
TPR_2
TPR_1
TPR_16
TPR_19
TPR_12
ANAPC3
TPR_CcmH_CycH
TPR_17
TPR_7
TPR_9
TPR_11
TPR_15
ARM_TT21
TPR_EMC2
TPR_4
SHNi-TPR
DUF6976
Motif
Other DBs
NCBI-GeneID:
122115039
NCBI-ProteinID:
XP_042544274
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MSGFSPELIDYLEGKISFEEFERRREERKTREKKVSLQEKGKLSAEENPDDSEVPSSSGI
SSTKSQDKDGNEGETSDGVSKSVHKVFASMLGETEDDEEEEEEEEEEEETPEQPTAGDVF
VLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLA
YEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTK
ALKYEPTNVRFLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYE
ANDSTSAINIIEEAFSKHQGLVSMEDVNIAAELYISNKQFDKALEVITDFSGIALEKKMS
EESTSEENEAVECVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGD
LYLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKV
VDLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTL
LFSQGKMYGYMDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDNNDQ
ETANYDAKAIFAVLTSVLPKDDWWNLLLKAIYTLCDLSRYEEAELLVDSSLEYYSFYDDR
QKRKELEYFGLSAAILDRNFRKAYNYIRIMVMENVNKAQLWNIFNQVTMHSQDVRHHRFC
LRLMLKYPDNHALCVLNGHNAFVSGSFKHALGQYVQAFRTHPNEPLYNLCVGLTFIHMAS
QKYVLKRHALIVQGFSFLNRYLTIRGPCQESFYNLGRALHQLGLTHLAIHYYQKALELPP
LVLEGIEVDQIDLRREIAYNLSLIYQGSGNTAMAQKLLYTYCSV
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggttcagtccagaactcatcgactacctggaagggaaaatctcctttgaagag
ttcgagaggcggagggaagagaggaagacccgggagaagaaagtgagtcttcaggaaaaa
ggaaaattatcagctgaagagaatccagatgattctgaagttccatcatcgtcagggatc
agctctaccaaatcccaggacaaagatggcaatgaaggagaaacatcagatggcgtgagt
aagtctgttcataaggtctttgcttccatgcttggagagactgaagatgatgaggaggaa
gaggaagaagaggaggaagaggaggaaacaccagagcagcccactgctggggatgtcttt
gtactggagatggttctcaatcgtgagaccaagaaaatgatgaaagagaaaagacctcgg
agtaaacttcccagagctctgagaggtctcatgggagaagccaatattcgctttgctcga
ggagaacgtgaagaggcaatattgatgtgcatggaaatcataagacaagctcctctggct
tatgagccattctctactcttgccatgatatatgaggatcaaggtgacatggagaaatca
ttgcagtttgagttgattgctgcccacttaaatcccagtgacacagaagagtgggttaga
ctggcagaaatgtctctggaacaagacaatattaagcaggctattttttgctatacaaaa
gctcttaaatatgaacctactaatgtccgttttctgtgggaacgatcaagcctttatgag
cagatgggtgatcataagatggcaatggatggttacaggcgaattttaaatctcttgtct
ccatctgatggagaacgttttatgcaattggctagagacatggcaaagagttactatgaa
gccaatgacagtacttcagctattaacatcattgaagaagctttctcaaagcaccagggc
ctagtctccatggaagatgttaacatagcagctgaactatatatttctaataagcagttt
gacaaagctttggaggttattacagatttttctggaatagcactagaaaaaaaaatgtca
gaagaaagcacctcagaagagaatgaagctgtagagtgtgttacctgcacaatacctgat
ggtgttccaatagatatcacggtcaagttgatggtctgccttgtacatctcaacatcctt
gaaccacttaatccacttttgacaacactggtggaacagaatcctgaagatatgggggat
ctttaccttgatgttgctgaagcatttctggatgttggtgaatataattctgcactcccc
ctcctcagtgcactagtttgctctgaaagatacaacctagcagtagtctggcttcggcat
gcagagtgcttaaaggccttaggctatatggaacgagctgctgaaagctacggcaaagtg
gttgatctggccccactccatttggacgcaagaatttcactttctacccttcagcagcag
ctgggccgtcctgagaaagctctggaagctctggaaccaatgtatgatcctgatactcta
gcgcaggatgccaatgctgcacagcaggaactgaagttactgcttcatcgttctactctc
ttgttttcacaaggcaaaatgtacggttacatggataccttgctgaccatgctagccatg
cttctaaaagtagctatgaatagagcccaggtttgtctgatttccagctccaaatcagga
gagaggcatctttaccttattaaagtatcacgagacaaaatatcagacaacaatgaccaa
gagacagcaaattatgatgcaaaagcaatatttgctgtactcacaagtgtcttgccaaaa
gatgactggtggaaccttcttttgaaggccatatacactttgtgtgacctgtctcggtat
gaagaagctgagttacttgtagattcatcattggagtattattcattttatgatgacaga
caaaaacgcaaagaactagaatattttggtctgtctgctgcaattctggacagaaatttc
agaaaggcatacaactatatcaggataatggtgatggaaaatgtcaataaagcccagcta
tggaatattttcaatcaagttaccatgcactcccaagatgtacgacatcaccgcttctgt
ctccgtctaatgctgaaatacccagacaatcatgccctgtgtgttttaaatgggcacaat
gcatttgtatctggtagctttaagcatgcacttggtcagtatgtgcaagccttccgcacc
catcctaatgaacctctctacaacctctgtgtgggcctgaccttcattcacatggcatcc
cagaagtatgtgttaaagagacatgctcttattgtgcagggtttttccttccttaatcga
tacctcactatacgtgggccttgccaggaatccttctacaatttgggccgagccctccac
cagctagggttgacacatcttgccatccactattaccaaaaggccctggagctccctcca
cttgtgcttgagggtatagaagttgaccagatagacttacgaagagagatcgcctacaac
ctgtccctcatttatcagggcagcgggaacactgccatggcccagaagctcctctacacc
tattgttctgtgtga
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