Dipodomys spectabilis (banner-tailed kangaroo rat): 122115179
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Entry
122115179 CDS
T07891
Symbol
Srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122115179 (Srrm1)
03015 mRNA surveillance pathway
122115179 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122115179 (Srrm1)
03041 Spliceosome [BR:
dsp03041
]
122115179 (Srrm1)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122115179 (Srrm1)
Spliceosome [BR:
dsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
122115179 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
122115179
NCBI-ProteinID:
XP_042544399
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKSPELPEPSVKIKEPSVQEATS
TSDILKAPKPEPIPEPKEPTPEKNSKKEKEKEKTRQRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMTAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKHQKET
SPRMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRPSPSPPPKRRVSHSPPPKQRSP
PATKRRSPSLSSKHRKGPSPSRPAREARSPQPNKRHSPSPRPRAPHTSSSPPPVRRGPSA
SPQRRQSPSPSTRPIRRVSRTPEPKKPKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPA
PPSPIQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHK
KHKKHKKEKAVATAAAAPMAPAAVVAATTTSAQEEPEAVPEPKKETESEAEDNLDDLEKH
LREKALRSMRKAQVSPQS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcgggacaagtgcagaacaggataatcggtttagcaacaaa
cagaagaaactactgaaacaactgaaatttgcagaatgtctagagaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcctctgctgttaagtgcacaagaaaacatcgctggaatccct
tctgctttcctagaactgaagaaagaagaaataaaacagagacaaattgaacaggaaaaa
ttggcatcgatgaaaaagcaagatgaagacaaagataagagggataaagaggaaaaagag
agcagcagagaaaaaagggagaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggagaaaagt
ccagagcttccagaaccttcagtgaaaataaaagaaccttcagtacaagaggccacatct
actagtgacatcctgaaagctcccaagcctgaacctataccagagcctaaagaaccgact
ccagaaaagaattccaaaaaagaaaaggaaaaggaaaagacccgacaaagatctcggtca
cgttccaaatcaagatcccgtacgcgttctcgctccccgtctcatactcgaccaagaagg
cgccatagatcccgatcaagatcatactcacctagaaggcggcccagtccaaggagacgg
ccttcccctcgaagaagaaccccaccaagacgaatgccgcctccgccaaggcacaggagg
agcaggtctcctggaagacgaaggaggcgttcatcagcatccttgtctgggagtagctca
tcatcctcatcatctcgttcccggtcaccaccaaagaagcctcccaagagaacatctagc
cctcctcgaaaaactcgcaggttatctccttctgcaagtcctccaaggcgaaggcacagg
ccatcacccccagcatctccaccaccaaaaactcgtcattccccaacaccccagcagtca
aaccgtacaagaaaaagtcgtgtttctgtgtctccagggagaacttcaggtaaagtgaca
aaacataaaggtactgaaaaaagagagtcgccttcaccagcaccaaagcctagaaaagta
gagttatctgaatcagaagaagataaaggtggcaagatgactgcagctgattctgtgcag
cagcggcgtcaatacagacgacagaaccagcagtcttcatctgactctggatcttcctcc
tcctcagaagatgagcgacccaagagatcccatgtgaagaatggtgaggtaggcaggcgg
cggagacattccccttcccggagtgcttctccatctccaagaaagcatcagaaagagact
tcccctcggatgcagatgggaaagcgatggcaatcgccagtgactaaaagtggtagacga
aggagaagtccctccccaccacccaccagaaggcgacgttctccttctcctgcccctcct
ccgcggcggcgcaggtctcccacaccaccaccacgtcgaaggacaccttcaccaccacca
cgtcggcgctcgccttccccaagaagatactctcctccaatacagagacgatactctcct
tctccacctcccaagagaaggacggcctctcccccaccccctcccaaacgaaggccatca
ccgtctccaccaccaaagcgccgggtctcccattctccacctcccaaacagagaagcccc
ccagccaccaagagacggtcaccttctttatcttcaaagcataggaaagggccctctcca
agccgccctgcccgggaagcccggtcaccacagccaaacaaacggcattcgccctcaccg
cggcctcgagctccccacacctcctcaagtcctccccccgttcgaagaggaccttctgca
tcaccccaaagaagacagtccccatctccaagtactaggcctattaggagagtctccaga
actccagaaccgaaaaagccaaaaaaggctgcctcacctagcccacagtctgtaagaagg
gtctcatcttcccgatctgtttctggatctcctgagccagcagctaaaaagcctccggca
cctccgtcccctatccagtctcaatcaccttctacaaactggtcaccagcagtaccagtc
aaaaaggctaaaagcccaacaccaagcccctcaccggccagaaattcagaccaagaagga
ggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaaacacaag
aagcacaaaaagcacaagaaggaaaaggctgtggctacagcggctgccgctcctatggcc
cctgcagccgttgttgcagccactaccacttcagcacaggaagaacctgaggcagtgcca
gagcctaagaaggagacagagagtgaagctgaagacaaccttgatgacttggaaaagcac
ctgcgggaaaaggccctgagatccatgcgcaaggctcaagtgtccccacagtcttag
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