Dipodomys spectabilis (banner-tailed kangaroo rat): 122115231
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Entry
122115231 CDS
T07891
Symbol
Wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122115231 (Wdtc1)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122115231 (Wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
TPR_19
Beta-prop_WDR75_1st
TPR_17
TPR_2
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
TPR_1
WD40_RFWD3
TPR_11
Beta-prop_SPT8
Beta-prop_HPS5
TPR_14
TPR_16
Beta-prop_EIPR1
ANAPC3
TPR_6
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
122115231
NCBI-ProteinID:
XP_042544535
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MAKVNITRDLIRRQIKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGD
LLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY
CGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQNPSAGVHTFCDRQK
PLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYK
QRPYTFLLPRKCHSSGEVQNGKMSTNGVSNGMSNGLHLHSNGFRLPESRGHVSPQVELPP
YLERVKQQANEAFACQQWTQAIQLYSKAVQKAPHNAMLYGNRAAAYMKRKWDGDHYDALR
DCLKAISLNPCHLKAHFRLARCLFELKYVAEAMECLDDFKGKFPEQAHSSACDALGRDIT
AALFSKNDGEDKKGAGGGGGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHCNTT
TDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLAT
SGIDPVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNADPLEVMLLNMGYRITGLSSG
GAGASDDEDSSEGQVQCRPS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtcaacataactagagacctcattcgtaggcagatcaaggagcggggtgcc
ctgagctttgaacggcgctaccatgtcactgacccctttatccggcggctaggcctagaa
gcagagctgcagggtcactcgggatgtgtcaactgtctggagtggaatgagaaaggagac
ttgctggcctctggttccgatgaccagcacacgattgtgtgggacccgctgcaccacaag
aagctgctctccatgcacactggacacactgcaaatatcttctctgtcaagttcctgcct
catgctggagaccgtatcttgatcacgggggcggctgactccaaggtgcatgtgcatgac
ctgacggtaaaggagactatccacatgtttggagaccacacaaaccgggtgaagcgcatc
gccacggcacccatgtggccaaacacgttctggagtgccgccgaggatgggcttatccgc
cagtatgaccttcgggagaacagcaaacactcagaggtgctgattgacctcacagagtac
tgtggccagctggtggaggccaagtgcctcacggtcaatcctcaggacaacaactgcttg
gcggtgggggctagtgggcccttcgtgaggctctacgacatccgtatgatccacaaccac
agaaagagcatgaagcagaacccttcagcaggggtacacaccttctgtgaccgacagaag
ccccttccagatggtgcagcccagtattatgtagcaggtcacctgccagtgaagctgcct
gactataacaaccgtctgagagtgctggttgccacctatgtgaccttcagccccaatggc
acagagctgcttgtcaacatgggaggggagcaggtctatttgtttgacctgacttacaag
cagcggccatacaccttcctcttacctaggaaatgtcactcctcaggggaagtccagaac
ggcaagatgtccaccaatggtgtatccaatggcatgtctaatggccttcatcttcacagc
aatggcttccggctgcctgagagtagagggcatgtcagtccccaggtagagctgccccca
tatctggagcgtgtgaagcagcaagccaatgaggcttttgcttgccagcagtggactcag
gccattcagctttacagcaaggctgtgcagaaggcccctcacaatgctatgctctatgga
aaccgagctgctgcctatatgaaacgcaagtgggacggtgaccactatgatgccctaagg
gactgcctcaaggccatctccctaaacccctgccacctgaaggcacacttccgcctggcc
cgctgcctctttgagctcaagtatgtggctgaggccatggagtgcctggacgacttcaaa
ggaaagttcccagaacaggcccacagcagtgcttgtgacgcattgggccgagatatcaca
gctgccctcttctccaagaatgacggtgaggacaagaagggagctggtggtggtggtggt
ggtggtccagtccgcctccggagcacaagccgcaaggactccatctcagaagatgagatg
gtgctacgggaacggagctacgactatcagttccgctactgtggtcactgcaacaccacg
acggatatcaaggaggcgaatttctttggcagcaatgctcagtacatcgtcagtggctct
gacgatggctccttcttcatctgggaaaaggagaccaccaacctagtccgcgtactccag
ggggacgagtccattgtcaactgcctgcagccacatcccagctactgcttcctggccact
agtggcattgaccctgttgtgcgactctggaaccctcgaccagagagtgaagacctcaca
ggccgagttgtggaagacatggaaggcgcctctcaagccaaccagcggcgcatgaatgcg
gacccactggaggtgatgctgctcaacatgggctaccggatcacaggcctgagcagcggg
ggcgccggggcctctgacgatgaggacagctccgagggccaagtgcagtgccggcccagc
tag
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