Dipodomys spectabilis (banner-tailed kangaroo rat): 122115662
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Entry
122115662 CDS
T07891
Symbol
Hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04371
Apelin signaling pathway
dsp04613
Neutrophil extracellular trap formation
dsp05034
Alcoholism
dsp05203
Viral carcinogenesis
dsp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
122115662 (Hdac4)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
122115662 (Hdac4)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
122115662 (Hdac4)
05203 Viral carcinogenesis
122115662 (Hdac4)
09165 Substance dependence
05034 Alcoholism
122115662 (Hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122115662 (Hdac4)
Enzymes [BR:
dsp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122115662 (Hdac4)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122115662 (Hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
122115662
NCBI-ProteinID:
XP_042544993
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MSSQSHPDGLSGRDQPLELLNPARVNHMPSSVDVATALPLQVAPTAVPMDLRLDRPFPLP
VAEPALREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCISSDPRYWYGKTQHSSLDQSSPPQSGVSASYNHPVLGMYDAKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSGP
SSPNSSSGNVSTENGIAPAVPSVPAETSLAHRLVTREGSAAPLPLYTSPSLPNITLGLPA
TGPSAGTASQPDAERLALPALQQRISLFPGTHLAPFLSASPLEREGGAPHSPLLQHMVLL
EPPPAQTPLVTDCYLSGLGALPLHAQSLVSADRLSPSMHKLRQHRPLGRTQSAPLPQSAQ
ALQHLVIQQQHQQFLEKHKQQFQQQQLHLSKIIPKPSEPGRQPESHPEETEEELREHQAL
LDEPFLDRPPGQKEAHPLASIQVKQEPIESDEEEAESVRDAEQGQRPPTEQELLFRQQAL
LLEQQRIHQLRNFQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPSTKPRFTTG
LVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRSKCECIRGRKATLEELQTVH
SEAHALLYGTNPLNRQKLDSKKLLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAV
GCVVELVFKVVTGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQLRLNVSKIL
IVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGSGAPDEVGTGPGVGFTVNMAFT
GGLDPPMGDTEYLAAFRAVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGY
LTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELEPLSEKVLQQRPNANAVR
SMEKVMEIHSKHWRCLQRLASTVGHSLTEAQKCESEEAETVTAMASLSVGVKPAEKRPDE
EPMEEEPPL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttctggccgagaccagccactggagctgctg
aaccctgcccgagtgaaccacatgcccagctcggtggatgtggccacagcactgcctctg
caagtagcccccacagcagtgcccatggacctgcgcctggaccgcccgttcccgctgccc
gtggcggagccggcgctgcgggagcagcagctgcagcaggagctcctggccctgaagcag
aagcagcagatccagcggcagatcctcatcgccgagttccagcggcagcacgagcagctc
tcacggcagcacgaagcccagctgcacgagcacatcaagcagcagcaggagatgctggcc
atgaaacaccagcaggagctgctggagcaccagcgcaagctggagcggcaccgccaggag
caggagctggagaagcagcaccgcgagcagaaactgcagcagctcaagaacaaggagaag
ggcaaggagagtgccgtggccagcactgaggtgaagatgaagctgcaggagtttgtcctc
aacaagaagaaggcactagcccaccggaacctgaaccactgcatctccagcgacccccgc
tactggtatgggaagacacagcacagctccctggaccagagctcacctcctcagagtggg
gtgtcagcttcctacaaccacccagtcctggggatgtacgacgccaaagatgacttccct
cttaggaaaacagcttctgaacccaacctgaaactgcggtccaggcttaagcagaaagtc
gctgagagacggagcagccccctgctacgcaggaaggacggacctgtggtcactgctctt
aaaaagcgtcccctggatgtcacagactctgcgtgtagcagtgctcctggctccggaccc
agctcgcccaatagcagctctggcaatgtcagcactgagaacggcatcgcacccgcagtg
cccagcgtcccagctgagaccagcttggcgcacaggctcgtgactcgagaaggctctgcc
gcccctctccctctctacacgtcgccatccttgcccaatatcaccttaggacttcctgcc
accggcccctctgcgggcacagcgagccagccggatgcggagaggctcgccctcccagcc
ctgcagcagcggatctccctgttccccggcacccacctggccccgttcctgagcgcctcg
cccctggagcgggagggcggagcgcctcacagccctctgctgcagcacatggtcctgctg
gagccgccgcccgcgcagacacccctcgtcacagactgctatctttcaggcctgggggcg
ttgcccctccacgcacagtccctggtcagtgcagaccgcctgtccccgtctatgcacaag
ctgcggcagcaccgccccctggggcgcacacagtcggcgcccctgccccagagcgcgcag
gctctgcagcacctggtcatccagcagcagcaccagcagttcctggagaagcacaagcag
cagttccagcagcagcagctgcacctcagcaagattatccccaaaccaagtgagccaggt
cggcagcctgaaagccatcctgaggagaccgaggaggagctccgagagcaccaggccctg
ctggatgagcccttcctggaccggccccccggacagaaggaggcccacccattggccagc
atccaggtgaagcaggaacccattgagagtgacgaagaggaggcggagtctgtgcgggac
gcggagcaaggccagcgcccacccactgagcaggaactgctcttcagacagcaagccctc
ctgttggagcagcagcggatccaccagctgaggaacttccaggcgtccatggaggctgct
ggcattcccgtgtcgttcggcggccacaggcctctgtcccgggcacagtcgtctccagcc
tccgccaccttccccatgtcagtccaggagccatccaccaagccaaggttcaccacaggc
cttgtgtatgacacgctgatgctaaagcaccagtgcacctgtgggaacaccaacagccac
cctgagcatgctgggaggatccagagcatctggtcccgcctgcaggagacaggcctgcgc
agcaagtgtgagtgcatccgtggacggaaggccacgctggaggagctgcagaccgtgcac
tcagaggcccacgcactgctctatggcacaaaccccctcaacaggcaaaaactggacagc
aagaagcttctaggatcgctgacctcagtgtttgtcaggcttccttgcggtggtgtcggg
gtggacagcgacaccatatggaatgaggtgcactcatcaggggcggcccgcctcgcagtg
gggtgcgtggtggagttggtcttcaaggtggttacaggggagttgaagaacggctttgct
gtggtccgccccccaggacatcatgctgaggagagcacccccatggggttttgttacttc
aactccgtggcagtggcggccaagcttctccagctgaggctgaatgtgagcaagatcctc
atcgttgactgggatgtgcaccacgggaatggaacccagcaggctttctacagtgatccc
agtgtgctctatgtgtccctgcaccgctatgacgatgggaacttcttcccaggcagcggg
gcacctgatgaggtgggcacagggccaggagtgggcttcactgtcaacatggctttcacg
ggcggcctggaccctcccatgggagacacagagtacttagcagccttcagagccgtggtc
atgccgatcgccaacgagtttgccccagatgtggtgctggtgtcctcgggcttcgatgct
gtggagggtcacccgacgcctctcggaggctacaacctgtctgccaaatgttttgggtac
ctgacaaagcagctgatgggcctggccggcggccgggtcgtgctggccctggagggcggc
catgacctgacggccatctgcgatgcctctgaagcctgtgtttctgctctgctgggaaat
gagctcgagcctctgtcagaaaaggtgttacagcagagacccaatgccaatgctgtccgc
tccatggagaaagtcatggaaatccacagcaagcactggcgctgcctgcagcgcctcgcc
tccaccgtgggccattccctgacggaggcgcagaagtgcgagagcgaagaggccgagacc
gtcaccgccatggcctcgctgtccgtgggcgtgaagccggcggagaagaggcccgacgag
gagcccatggaggaggagccaccgctgtag
DBGET
integrated database retrieval system
