Dipodomys spectabilis (banner-tailed kangaroo rat): 122115722
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Entry
122115722 CDS
T07891
Symbol
Cstf2t
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122115722 (Cstf2t)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122115722 (Cstf2t)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122115722 (Cstf2t)
U7-dependent histone pre-mRNA processing factors
122115722 (Cstf2t)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122115722
NCBI-ProteinID:
XP_042545129
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQAGSVPGPGPGPGPASGLCPGPSVMLNQQNPPAPQ
PQHLARRSVKDIPPLMQTPIQGGIPAPGPMPTAVPGPGPGSITPGGAMQPQVGMPGVGPV
PLERGQVQMSDPRAPMPRGPMTAAGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPP
HQGPPMHHDSRGPSSHDMRGGPMADPRMLIGEPRGPMIDQRGLPMDGRGGRESRGMETRA
METEVLETRVMERRGMDTCVMEARGMEARGMDARGLEMRGPGPSSRGPMTGGIQGPGPIN
LGASGPPGPRQVPSISGVGNPGGGMQGAGMQGGAMQGAGMQGGMQGGMQGAGMQGGGMQG
AGMQGGGMQGAGMQGGGMQGAGMQGGGMQGAGMQGAGMQGGGMQGAGMQGASKQGGGQPN
SFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagaccccgccatggatcgatccctgcgttcggtgttcgtg
gggaacattccgtacgaggcaaccgaggagcagctgaaggacattttctcagaggttggt
tctgtggtcagtttccggctggtgtacgaccgggagacgggcaagcccaagggctatggg
ttctgcgagtaccaggaccaggagaccgcgctcagcgccatgcggaacctcaacgggcgg
gagttcagtgggcgagcgctgcgggtggacaacgccgccagcgagaagaataaggaggag
ttaaagagcctggggcccgcggcgcccattattgactccccctatggagaccccatcgat
ccggaagacgccccggaatcgatcactagagcagtcgccagtctacccccggagcagatg
tttgagctgatgaagcagatgaaactgtgtgtccaaaacagccaccaggaagctcggaac
atgttgcttcagaacccacaactggcgtatgcgctgctgcaggcccaagtcgtgatgaga
atcatggatcctgagattgcgctgaaaattctgcatcgcaagatacatgtcacaccactg
atccctggcaagtctcaggctggctctgttcctggacccgggcctggacctgggcctgca
tctggactctgtccaggacccagtgttatgttaaaccagcagaatcctccagcccctcag
cctcagcatttggcgagaagatctgtgaaggatatcccgcctttgatgcagactcctatt
cagggtggaattccagctccagggccaatgcccacagcagttcctggcccaggccccggt
tccataactcctggaggagcaatgcagccccaagttggaatgccgggggtgggcccagtg
cctttagagcgaggacaagtgcagatgtctgatcctagagctcctatgcctcgtggaccc
atgactgctgctggcctgcctcctcgaggactgttaggagatgctccaaatgacccacgt
ggagggactttgctgtctgttactggagaggtagagcccaggggctatctgggcccaccc
catcaaggtccccccatgcaccatgatagtcgtggcccctcttcacatgatatgagagga
ggaccaatggcagatccccgaatgctaattggagagccgagaggacccatgatagatcaa
agaggtctacctatggatggcagaggaggtcgagaatctcgagggatggagactcgagcc
atggagactgaagtcttagaaactcgagtaatggagagaagaggaatggacacttgtgtg
atggaagccagaggaatggaagcccgaggcatggatgcaagaggattagagatgcgtggc
cctggcccaagttccagaggccctatgactggtggaatccagggtccaggtcccattaac
cttggggcaagtgggcctccaggacctagacaggtcccaagcatttcaggagtaggaaat
cctgggggtggcatgcagggagcaggcatgcagggaggagccatgcagggggcaggcatg
caagggggaatgcaaggaggtatgcagggagcaggcatgcagggaggaggtatgcaggga
gcaggcatgcagggaggaggcatgcagggagcaggcatgcagggaggaggcatgcaggga
gcaggcatgcagggaggaggtatgcagggagcaggcatgcagggagctggcatgcaggga
ggaggtatgcagggagcaggcatgcagggagcaagcaagcaaggtggaggccagccgaac
agttttagtcctgggcagagccaggtaactccacaggatcaagaaaaagcagcgttgatc
atgcaggttcttcagctgactgcagatcagattgccatgctgcctcccgagcaaaggcag
agtatcttgatcttaaaggaacaaatccagaaatccactggagcctcttga
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