Dipodomys spectabilis (banner-tailed kangaroo rat): 122115729
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Entry
122115729 CDS
T07891
Symbol
Myof
Name
(RefSeq) LOW QUALITY PROTEIN: myoferlin
KO
K22125
myoferlin
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122115729 (Myof)
Membrane trafficking [BR:
dsp04131
]
Endosome - Lysosome transport
Others
Ferlins
122115729 (Myof)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
Pex24p
Motif
Other DBs
NCBI-GeneID:
122115729
NCBI-ProteinID:
XP_042545135
LinkDB
All DBs
Position
Unknown
AA seq
2062 aa
AA seq
DB search
MLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLD
FSSSLGIVVKDFDTIGQNKLIGTATVSLKDLTGDQSRSLPYKLISLLNDRGQDTGATIDL
VIGYDPPSAPHPNDPSGMSMPAMGGEEEEEDPGDEDRLDGPGRVPGPKGPTGTMSEAHLA
RRLAKGKKTRRILSNKPQDFQIRVRVIEGRQLSGNNIRPVVKVHICGQTHRTRIKRGNNP
FFDELFFYNVHITPSELMDEIVSIRVYNSHSLRADSLMGEFKIDVGFVYDEPGHAIMRKW
LLLNDPEDTSSGAKGYLKVSMFVLGTGDEPPPKKRDRDIDSDDVESNLLLPAGIALRWVT
FLLKIYRAEDIPQMDDAFSQTVKEIFGGVADKKNLVDPFVEVAFAGKKVCTNIIEKNANP
VWNQVVNLQIKFPSMCEKIKLTVYDWDRLTKNDVVGTTYLYLSKIAASGGEVEDLSSSGT
GAASYTVNTGETEVGFVPTFGPCYLNLYGSPREYTGFPDPYDDLNTGKGEGVAYRGRILV
ELSTFLEKTPPDKMLEPISSDDLLIVEKYQRRRKYSLSAVFHSATMLQDVGEAIQFEVSI
GNYGNKFDATCKPLASTTQYSRAVFDGNYYYYLPWAHTKPVVTLTSYWEDISHRLDAVNM
LLVMVERLQSNIEALKSGIQGKIPANQLAELWLKLIDAVIEDTRYTLPVTEGKSNVTVLD
TQIRKLRTRYLSQIHGAAVRMRSEATDVKSTLLEIEDWLDKLMQLTEEPQNSMPDIIIWM
IRGEKRLAYARIPAHQVLYSTSRENASGKYCGKTQTILLKYPQEKNNGTKVPVELRVNIW
LGLSAVEKKFNSFAEGTFSVFAEMYENQALMFGKWGTSGLVGRHKFSDVTGKIKLKREFF
LPPKGWEWEGDWRVDPERSLLTEADAGHTEFTDEVYQNDSRYPGGEWKPAEDTYTDANGD
KAASPSELTCPPGWEWEDDAWVYDINRAVDEKGWEYGITVLPDNKPKAWVAAEKMYHTHR
RRRLVRKRKKDLTQTPSSTARAMEDYEDQEGWEYASLIGWKFHWKQRSSDTFRRRRWRRK
MAPSEIHGAAAIFKLEGALGADTSEDGDERSKEKQQHTATTVFGANTPIVSCHFDRVYIY
HLRCYIYQARNLMALDKDSFSDPYAHVSFLHRSKTTEIIHSTLNPTWDQTIIFDEIEIYG
EPQTVLQNPPQVIVELFDNDQVGKDEFLGRSICSPLVKLNSEMGITPKLLWHPVMNGDKA
CGDVLMTAELILRDKDGSNLPILPSQRAPNLYMVPQGIRPVVQLTAIEILAWGLRNMKNY
QMASITSPSLIVECGGERVESVVIKNLKKTPNFPSSVLFMKVFLPKEELYMPPLVIKVID
HRQFGRKPVVGQCTIEHLDRFRCDPYAGKEDIVPQLKASLMSAPPCRDVVIEIEDTKPLL
ASKLSEKEEEIVDWWSKFYASSGEHEKCGQYIQKGYSKLKIYDCELEDVTDFEGLTDFSD
TFKLYRGKSEENEDPSVVGEFKGSFRIYPLPDDPSVPAPPRQFRELPDSIPQECTVRIYI
VRGLELQPQDNNGLCDPYIKITLGKKVIEDRDHYIPNTLNPVFGRMYELSCYLPQEKDLK
ISVYDYDTFTRDEKVGETVIDLENRFLSRFGSHCGIPEQYCISGVNTWRDQLRPTQLLQN
VARFKGFPQPILSEDGNRIRYGGQDYSLDEFEANKILHQHLGAPEERLALHILRTQGLVP
EHVETRTLHSTFQPNISQGKLQMWVDVFPKSLGPPGPPFNITPRKAKKYYLRVIIWNTKD
VILDEKSITGEDMSDIYVKGWIPGSEENKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEQ
LCIVAKKEHFWSIDQTEFRVPPRLIIQIWDNDKFSLDDYLGFLELDLHHTIVPAKSSEKC
NLDMVPDLKAMDPLKAKTASLFEQKSMKGWWPCYADKDGCRVLAGKVEMTLEVLNEKEAD
ERPAGKGRDEPNMNPKLDPPNRPETSFLWFTNPCKTMRFIVWRRFKWVIIGLLILLILLL
FVAVLLYSLPNYLSMKIVRPNA
NT seq
6189 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtgtgattgtagaatctgccagtaatatccctaaaacgaaattcgggaaaccg
gatcctattgtctctgtgatttttaaggatgagaaaaagaaaacaaagaaggtggataat
gaactcaaccctgtgtggaatgagattttggagtttgacctgaggggtataccactggac
ttctcatcttcccttgggattgttgtgaaagattttgatacaattggacaaaataaatta
attggcacagctactgtgtcactgaaggatctgactggggaccagagcagatcactgccc
tataaactcatttccctgctgaatgacagggggcaggacactggggctaccattgatttg
gtgattggctatgacccgccttcagctccacacccaaacgaccccagtgggatgagcatg
ccagccatgggaggagaagaggaagaagaagacccaggcgatgaagacagattagatggt
ccaggcagagttcctgggccgaaaggaccaacggggacaatgtcggaagctcatcttgct
aggaggcttgctaaaggcaagaagactcggcggatactgtccaacaagccacaggatttc
cagatccgagtcagagtgattgagggtcggcagctaagtggaaacaacataaggcctgtg
gtcaaggtccacatctgtggccagacacaccgaacaagaatcaagagagggaacaatcca
ttttttgatgagttatttttctacaatgtccacataaccccttcagaactgatggatgag
attgtcagcatccgggtttataactcccattctctgcgggcagactctctgatgggggaa
ttcaagattgatgttggatttgtgtatgatgaacctggacatgccatcatgaggaaatgg
cttctcctcaatgaccctgaagataccagttcaggtgctaagggttacctgaaagtcagc
atgtttgtcttgggaactggagacgaacctcctcccaagaaaagagatcgtgatattgac
agtgacgatgtggagagcaatttattattgcctgctggcattgccctgcggtgggtgacc
ttcttgctgaaaatctaccgagccgaggacatcccacagatggatgatgctttctcgcag
acagtgaaggagatatttggtggcgttgcagataagaaaaacctcgtggacccttttgtt
gaagttgcctttgctggaaaaaaggtgtgtacaaatataattgagaaaaatgcaaaccct
gtgtggaatcaagtggtcaatcttcagatcaagtttccttccatgtgtgaaaaaataaaa
ctaacagtatatgactgggaccgtcttaccaaaaatgatgttgttggaacaacgtattta
tacctctctaaaattgctgcctctggtggggaagtagaagatctctcatcttcaggaact
ggggctgcatcgtatacagtaaatacaggagaaacagaggtgggctttgtcccaacgttt
ggaccttgttatctgaacctttatggaagccccagagagtacactggattcccagacccc
tatgatgacctaaacacaggaaagggagaaggagttgcctacagaggcagaatcttggtt
gaattaagcacttttcttgaaaagacaccaccagataagatgcttgagcccatttcaagt
gatgacttgctgattgttgagaaataccagcgaaggcggaagtacagcctgtctgctgtg
tttcattcagccaccatgttgcaagatgttggtgaggccattcagtttgaagtcagcatt
gggaactatggcaacaagtttgatgcaacatgtaagcctttggcatccacaactcagtat
agccgtgctgtatttgatgggaactactattactacttaccctgggctcatacaaagccg
gtggtcaccctgacttcctactgggaggatattagtcatcgcctggatgcagtgaacatg
ctcttagtcatggtagaacggctgcaatccaatatagaagctctaaaatcagggatccaa
ggcaaaattcctgcaaaccagttggctgaactgtggttgaagctgatagatgcagttata
gaagatacaagatacaccttacctgtcacagaaggcaaatctaatgtgacagttcttgat
actcagatccgaaagttgaggaccagatacctctcccagatacacggggcagctgtgagg
atgaggtctgaagctacggatgtgaagtctaccttgttagaaattgaagactggctcgat
aagttaatgcaactgactgaagagccacagaacagcatgcctgacattatcatctggatg
attcgaggggagaaaagactggcctatgcccgaattcctgcacatcaggttttatactcc
accagtagagaaaatgcatctggaaaatactgtgggaaaacccaaaccatcctcctgaag
tacccacaggagaaaaacaatgggaccaaagtgcctgtggaattgcgagtgaacatctgg
ctgggcttaagtgctgttgagaagaaattcaatagctttgcagaaggaacattctcagtc
tttgctgaaatgtatgaaaatcaagccctcatgtttggaaaatggggcacctctggatta
gtgggccgtcataagttttctgatgtcacgggaaagataaaactcaagagggaattcttt
ttgcctccaaaaggctgggaatgggaaggagactggagagttgaccctgaaagaagcttg
ctgacagaggcggatgcaggtcacacggagttcactgatgaggtctaccagaacgacagc
cgctaccctggaggcgagtggaagccagcagaggatacctacaccgatgcgaatggagac
aaagcagcatcacccagtgagctgacttgccctccaggttgggagtgggaagacgatgcc
tgggtctacgacatcaatcgagcagtagatgagaaaggctgggagtatggaattaccgtt
cttccggacaataagcccaaggcctgggttgcagcagagaaaatgtatcacacccataga
cgacgacgcctggtccgaaaacgcaagaaagatttgacacaaacaccttcaagtactgca
agggctatggaagattatgaagatcaggagggctgggagtatgcttctttaattggctgg
aaatttcactggaaacaacgtagttcagacacctttcgccggagacgctggaggaggaaa
atggcgccttcagaaatccatggtgcagctgccatctttaaacttgaaggtgctcttggt
gctgataccagtgaagacggagatgagaggagcaaggagaaacagcagcacacagccacc
actgtgtttggggcaaacacccccattgtgtcttgtcactttgacagagtctacatctac
cacctgcgctgctatatctaccaagccagaaacctcatggctttagacaaagatagtttt
tcagatccatacgctcatgtctccttcctccatcgaagcaaaaccaccgagatcatccat
tcaaccctcaatcccacatgggaccaaacgattatatttgatgaaattgaaatctatgga
gaacctcaaacagttctacagaacccaccccaagttatcgttgaacttttcgacaacgac
caagtgggcaaagatgagtttttaggacgaagcatttgctctcctctggtgaagctaaac
tcagaaatgggcatcactcccaaacttctctggcacccagtcatgaatggagataaggcg
tgtggagatgtcctcatgactgcagagctgattctaagggacaaggatggctccaacctt
cccattcttccttctcaaagggcacccaatctatacatggtcccgcaggggatcaggcct
gtggttcagctcactgctattgagattctcgcttggggcttaagaaacatgaaaaactac
cagatggcttccattacgtcccccagtctcattgtggagtgtggaggggaaagggtggag
tctgtggtcatcaaaaacctgaagaagacacccaactttccaagctccgttctcttcatg
aaagtgttcttgcctaaggaagaattgtacatgcctccactggtgatcaaagtaattgac
cacaggcaatttgggcggaagccagtggttggccagtgcaccatcgaacacctggaccgt
tttcgctgtgacccctatgctggaaaggaggatattgtgccacagctgaaagcctccctt
atgtctgcgcccccctgccgggatgtcgttattgaaatagaagacactaaacctttactg
gcttccaagctgtcagaaaaggaggaagaaatcgttgactggtggagtaaattttatgct
tcctcaggggaacatgaaaaatgtggacagtatattcagaaaggctactccaaactcaag
atatatgactgcgaacttgaagacgtcacagactttgagggcctgacagacttctcagat
actttcaagttgtaccgaggcaagtcagaggagaatgaagacccttctgtggtgggagaa
ttcaagggctcttttaggatctatcctctgccagatgaccccagtgtgccagcccctccc
aggcagtttcgggaattacctgacagcattccacaggaatgcacagtgcggatttacatt
gttcgaggcttagagctgcagccccaggacaacaatggcctgtgtgacccatacataaaa
ataacactgggcaagaaagttattgaagatcgagaccactacattcccaatactctcaac
ccagtttttggcaggatgtatgaactaagctgctacttacctcaagaaaaagacctgaaa
atttccgtctatgattatgacacctttaccagggatgagaaggttggagagaccgtgatt
gacctggagaatcgcttcctctcccgcttcggctcccactgtggcatccctgagcagtac
tgcatctctggagtcaatacctggcgagatcagttgagaccaacacagttgcttcaaaat
gtagccagattcaaaggcttcccacaacccatcctttctgaagatggaaatagaatccga
tatggaggacaagactatagtttggatgaatttgaagccaacaaaatcctgcatcagcac
cttggggcccccgaagagcgtcttgcccttcacatcctcaggactcaggggctggttcct
gaacatgtggaaacaaggactttgcacagcaccttccaacccaatatctcccagggaaaa
cttcaaatgtgggtagatgtttttcccaagagtttggggccaccaggccctcctttcaac
atcacaccacggaaagccaagaagtattacctgcgagtgatcatctggaacaccaaggat
gtcatcctggatgagaaaagcatcactggagaggacatgagtgacatctatgtcaaaggc
tggattcctggcagtgaagaaaacaaacagaaaacagatgtccattacaggtctttggat
ggtgaagggaattttaactggagatttgtcttcccctttgactacctccctgctgaacaa
ctctgtattgtggctaaaaaggagcatttctggagtattgaccaaacagaatttcgagtc
ccaccccgactgatcattcagatatgggacaatgacaagttttctctggatgactacttg
ggtttcctggaacttgatttgcatcataccatcgttccagcaaaatcatcagagaaatgc
aatttggacatggttccagacctcaaagccatggacccccttaaagctaagactgcctca
ctctttgaacagaagtctatgaaaggatggtggccttgctacgcagataaagatggctgc
cgtgtgctggctgggaaagtcgagatgacactggaggttctcaatgagaaggaggccgat
gagaggccagccgggaaggggcgggatgaacccaacatgaaccccaagctggacccaccg
aaccgaccggaaacctccttcctctggttcaccaacccctgcaagaccatgcgcttcatc
gtgtggcgccggtttaagtgggtcatcatcggcctgctcatcctgctcatcctgctgctc
ttcgtggccgtgctcctgtactcactgccgaactatttgtcaatgaagattgtgaggcca
aatgcgtaa
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