Dipodomys spectabilis (banner-tailed kangaroo rat): 122115798
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Entry
122115798 CDS
T07891
Symbol
Pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122115798 (Pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
122115798 (Pdlim1)
Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122115798 (Pdlim1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122115798
NCBI-ProteinID:
XP_042545289
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MTTQQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAVANLCIGDIITAIDGENTNG
MTHLEAQNKIKGCTDNMTLTVTRSEQKIWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAH
NRSAMPFTASPASGTAPRVITNQYNNPSGLYSSENISNFNNAVESKTAASGGEANGRPMD
HAQASGGLIIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESDEKGDPNKPSGFRSV
KAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRERHRHPECYVCTDCGTNLKQKGHFF
VEDQIYCEKHARERVTPPEGYDVVTVFPQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagcagatcgtcctccagggcccgggaccctggggcttccgcctcgtgggc
ggcaaggacttcgagcagcctctcgccatttcccgggtcactcctggaagcaaggccgcc
gtagctaatttatgtattggagacattatcacagccatcgatggagaaaataccaacggg
atgacgcatttagaagctcagaacaaaatcaagggctgcacagacaacatgactctcaca
gtaaccagatctgaacaaaaaatttggtctcctctagtgactgaggaagggaaacgccac
ccatacaagatgaatttagcctctgaaccccaagaggtcctacacataggaagtgcccac
aacagaagtgccatgccctttactgcctcacctgcctctggcactgcccccagggtcatc
accaaccagtacaacaacccatccggcttgtactcctctgaaaacatctccaacttcaac
aatgctgtggagtcaaagactgcagccagtggaggagaggccaatggcagacccatggac
cacgctcaggcatcagggggcctaatcatcgacaaggaatctgaggtttacaagatgctg
caggagaagcaggagttgaatgagcccccgaagcagtccacttcgttcctggttctgcag
gaaatcttggagtcagatgaaaaaggggaccccaacaagccctcgggatttagaagtgtg
aaggctccagtcaccaaagtggctgcctccattggaaatgctcagaagctgcccatgtgt
gacaaatgtggcactggcattgtcggggtgtttgtgaagcttcgagaacgtcatcgccac
cctgagtgttacgtgtgcaccgactgtggcaccaacctgaagcagaagggccatttcttc
gtagaggatcagatctactgtgagaagcacgcccgggagcgggtcaccccccctgagggc
tacgacgtggtcaccgtgtttccccagtga
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