Dipodomys spectabilis (banner-tailed kangaroo rat): 122115809
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Entry
122115809 CDS
T07891
Symbol
Exosc1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122115809 (Exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122115809 (Exosc1)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122115809 (Exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122115809 (Exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
122115809
NCBI-ProteinID:
XP_042545302
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEASPGSGTYTRHGYIFSSLVGCLTKTSENGALPVVSVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcccgtgagatactgtattccaggcgaacgtctgtgcaacttggaggaagcc
agcccgggcagcggtacctacacccggcacggctacattttttcgtcgcttgtcggctgc
ctgacgaagaccagcgagaacggcgcgcttcctgtggtatctgtgatgcgagaaacagag
tctcagttactgccagatgtgggagctattgtcacctgtaaggtctctagcatcaattca
cgttttgccaaagtacatatcctctatgtgggatccacaccacttaagaattcttttcga
ggaactattcggaaagaagatgtccgagcaactgaaaaagacaaggttgaaatttataag
agtttccgtccaggtgacattgtcttagctaaagtgatctccctaggagatgcacaatct
aactacctgctgaccactgctgaaaatgagctgggagtggtggtggcccacagtgaatca
ggtgtccagatggttcccatcagctggtgtgagatgcagtgccctaagacccacactaag
gaattccggaaagtggcccgagtacagcctgaattcttgcagacttaa
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