Dipodomys spectabilis (banner-tailed kangaroo rat): 122116301
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Entry
122116301 CDS
T07891
Symbol
Nlrc5
Name
(RefSeq) protein NLRC5 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dsp04054
]
122116301 (Nlrc5)
Pattern recognition receptors [BR:
dsp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122116301 (Nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
Atypical_Card
LRR_6
LRR_4
NLRC4_HD2
LRR_8
AAA_16
NPHP3_N
AAA_22
AAA
AAA_33
AAA_30
RsgA_GTPase
nSTAND3
NOD2_WH
ABC_tran
TsaE
AAA_19
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
122116301
NCBI-ProteinID:
XP_042545882
LinkDB
All DBs
Position
Unknown
AA seq
1859 aa
AA seq
DB search
MTPWSIYHEPRDQDQPLMDPFSHQPDSRSLWSWLVSLLSKHQEWLSAKMQFFLPTVEVSS
SDEALDVEQRVTQQLSKLHAQGPATWQSLVHSMCMELEVPLELEVLLLSTSGCDKDEFPG
QLGADEESQLEPLLHHGLKHPPQSCESSPCPKYCRKQQLELANKYLELLKAFVHQHHDSK
CWGPEETLTTHQYYIPTILQWSRATAPLDTQERTIKRDFKTEDGGDVDFQDLFNFRTHKG
PRVTVLLGKAGMGKTTLVRRLCQTWADGQLDHFQALFLFEFRQLNLIKGFLTLRQLLFDL
YLSPESGSDAVFQYLQEKANRVLLIFDGLDEALHPCSDKETLGPDGAASVHTLFSNLCRG
TLLPGCWVITTSRPGKLPTCLPREVAVVHMWGFDGQRVEEYMSHFFSGQPSKEMVLEELR
ANGRLWSMCAVPALCQITCLCLHHLLPRTPMDQSAALLPTVTQLYLQMLLSLSPCEDLPA
GSLLGLGEVALGGLDSGKVIFYSRDIPPALMAFGTTHSLLTSFCTCTSPGYWETGYAFTH
LSLQEFFAALYLMASPLVDRDTLTGHVTLNSHWVLRTKGRVGLSDKLPTFLAGLASHTCA
PFLSHLAKRNEAWVSCRQAAVVQVLSKLATQKLTGPKLVELCHCVAETQEAELATLTAQG
LPYHLPFHNFPLNFADLAALTGILGHRADPLHLEFEGCLLEPHCPEALIGCGGVESLSFK
SRKCGDAFAEALSRSLPTMKSLQKLRLVGSKVTARGISYLVQALPLCQQLEEVSLQDNQL
KDPEVLDIVKVLPCLPRLRKLDLSRNSFSVSTLLHLVKVAVTCHTVRILQVRESDLVFLL
SPPMETTAELWSRVPDLQENVSPKTEAQGRILTLRLQKCRLKVCDVKVLIDMLREGPHLE
EVDLSENHLEDEGCRLLAEAVPQLHITKKLDLSDNGLSMVGVAYVLRAVDMCWSLAELRI
SLLHKTVVLMFAQEAGEQDGSWESAALLHSLSPLEASELPSSSRNIRLTHCGFQAKHVKA
LYKALGGSRRPHHPGQLCHLDLSSNALGDHGVARLAQLLPGLGPLQSLNLSKNGSSLDAV
LSLAQCMASLSWVFHLDISFENQNILLTGDKRGRGILAGGPFPDPPAGTQISGFSQRCIP
RSFCLKECPLNPLSLTRLFHSLEACPGPLEIRLSCEALSDESLETLLRCFPQLPQLSLLQ
LSQTPLSPRSPWLLAGALPLCPRGQKLEIRSLNQATLHFRLREEPEGVYCGFPDCGLGPE
HVEQLCWSLGQCETLSHLDLDANLMGNEGLSSLLEHLQQTPLSGWLDLSHNGISQEGALS
LVETLPSNPRIQEALVNLGPEQRFRLRFSRQEASGVTLRLSHCHLRPEHVPRLAAGLSHA
LQPMELTLTECSLDLTQLMVLLSWVKPPAGVLGIRVEEPWVGRAGVLALLEVCAQVSGHI
TEISIAETQLWLQLEFPRKEEDPQQALRLAGHGPGTPYSCLVTQLMETCGRLQQLSLSQV
NLCNEGIISSQLLLSLLPALSELRTFRLTSSYVSTESLTHLASGLSHCGHMEELDFSSSQ
FGEEGTRMLVAALEGMRGLKRLQLNENSIGHTGCCHLSQALRAAGSLEELGLSQNQIGDV
GAQHIAATLPELPELRKIDLSRNGISPAAGAQLAESLMLCQHLEVLMLGYNTLGDLTALQ
LAQGLPQHLKVLHLPGSHLGPEGALSLGRALDGHPHVEEINLAENSLADGVPHFCKGLPQ
LRRISLLFCKIDDQTAKRLATSFMLCPALEEILLSWNLLGDEAAAELAQVLPRMGQLKKV
DLEKNQITARGAWLLLQGLAQEAGVPIICLWNNPITPDMAQRLQSQEPRLNFAFFDQQP
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgactccctggagcatctatcatgaaccaagagaccaggaccagcccctcatggatccc
tttagccaccagccagacagcaggagcctgtggagctggcttgtgagtctgctcagcaaa
catcaagaatggctgagcgctaagatgcagttcttcctccctactgtggaggtgagctcc
agtgatgaggccctagatgtggagcagagggtcacccagcaactcagcaagctgcacgcc
caagggccggccacctggcaatcgctggtgcactccatgtgcatggagttggaggtacct
ctggagctggaggtgcttctgctgagcacttcgggctgtgataaagatgagttccctggg
cagctgggagctgatgaggagagtcaacttgaacctctactccaccatggcctcaaacac
cctcctcagagctgtgaatcctcaccatgccccaagtactgcaggaagcagcagctagag
ttggccaacaagtacttggagctcctaaaggcatttgtccaccaacaccatgacagcaaa
tgctgggggccagaggagaccctcaccacccaccagtactacatacccaccatcctgcag
tggagccgggccacagcacccttggacacccaggagagaaccatcaagagagacttcaag
acagaagatggcggtgatgtggacttccaagatctcttcaacttcaggacccacaagggc
ccacgagtgacagtgctcttgggaaaggccggcatgggcaagaccacactagtccggagg
ctctgccagacatgggctgatggccagctggaccacttccaggccctattcctttttgaa
ttccgccagctcaacctgatcaaaggcttcctgacgctgcgccagctcctctttgatctg
tacctgagccccgaatcaggctccgacgctgtcttccagtacctacaggagaaggccaac
agagtcctgctgatctttgacgggctggatgaggctctccacccctgctctgacaaggag
actctgggtcctgatggcgcagcctcagtccacaccctcttctccaatctctgccgtgga
accctcctacctggctgctgggtgatcactacctcccgtccagggaaactgcccacttgc
ctgcccagagaggtagctgtggtccatatgtggggcttcgatgggcagcgggtggaggag
tacatgagccacttcttcagtgggcagccttctaaagagatggtcctggaagagctgcgt
gcaaatgggcgtctttggagcatgtgtgcagtacccgcgctgtgccaaatcacctgcctc
tgcctccatcatctgctccccagaactcccatggaccagtctgcagccctcctgcctaca
gtgactcagctctacctgcagatgctgctttccctcagcccctgtgaggatctccctgcc
ggctccctgctgggccttggagaggtggccctgggaggcctggactctggaaaggttatc
ttctactcaagggacattccaccagccttgatggcttttggaactacccacagcttgctg
acctctttctgcacctgcacaagccctgggtactgggagacaggctatgcatttacccat
ctcagcctgcaggagttttttgctgccctgtacctgatggccagccctctggtggacaga
gatacactcactggccatgtcacccttaattcccactgggtgctgcggaccaaaggtaga
gtgggcctctcggataaactccccaccttcctggcaggcctggcatctcacacctgtgct
ccattcctcagccacctggccaagaggaatgaagcctgggtgagctgcaggcaggctgct
gttgtgcaggtgctgagcaagttggccacccagaagctcacagggccaaagttggtggag
ctgtgtcactgtgtagctgagacccaggaggctgaactggccactctcactgctcaaggc
ctcccttaccatctgcccttccacaatttcccactgaacttcgcagacctggctgccctg
actggcatcctgggacacagagctgaccctctgcacctggagtttgagggctgcctcctg
gagccccactgccctgaggctctgataggctgtgggggggtagagtctctcagctttaag
agcagaaaatgtggtgacgcatttgctgaagccctgtcaaggagcttgcctaccatgaag
agcctacagaagctaaggttagtgggaagtaaggtcacggcccgaggcatcagctacttg
gtgcaggctttgcccctgtgtcaacagctggaggaggtcagtttgcaggataaccagctc
aaggacccggaggtgctggacatcgtgaaggtactcccttgcctgccaaggctccgcaag
cttgacctgagcagaaacagcttctctgtatcaactctactccacttggtgaaggtggca
gtcacatgtcatactgtcaggatactgcaggtcagagagtcagaccttgtcttccttctt
tctccacccatggagaccactgcagagctgtggagcagagttccagacctacaggaaaat
gtcagcccaaagacagaggctcagggcagaatcctgacactcaggctccagaaatgtcga
ctcaaggtctgcgatgtgaaagtcctcatagacatgctccgggaaggtcctcacctggag
gaagtggacctctcagagaaccatctggaggatgaaggctgtcgactcctggcagaggct
gtaccccagctgcacatcaccaagaaattggacctcagtgacaacgggctctccatggtg
ggcgtggcctacgtgctgagggctgtggacatgtgctggagcctggcagagctgcgcatc
agcctgctgcacaaaactgtagtccttatgtttgcccaggaggcaggggagcaggacggg
tcctgggaaagtgctgcgcttctccacagcctctcacccctggaggcctcggagctgccc
tcaagctcccgaaatatcaggctgacgcactgcggcttccaggccaagcacgtaaaagca
ctctacaaagcactggggggaagccggcgcccccatcaccctggccagctgtgtcacctc
gacctgtctagcaatgccctgggagaccacggggtggctcggttggcccagctgctccca
ggcctgggacccctgcaatccttgaacctcagcaagaatggctcatccctggatgcggtg
ctcagtttggcccagtgcatggcttccctgtcgtgggttttccacctggacatcagcttt
gagaaccagaatatcctcctgacaggtgacaagagaggaaggggtatattggctggtgga
ccttttccagaccccccggctggaacccagatctcagggttcagccagcgctgcatcccc
aggagcttctgcctcaaggagtgtccactgaatcccctaagcctcactcgtctcttccac
tctctggaggcatgtccaggaccactggaaattaggttgtcctgcgaggccctgagtgat
gagagcctggagaccttgctgcgttgctttccccagctgccccagctaagcctgctgcag
ctaagccagacaccactgtccccaaggagcccctggctgctggctggcgccctccccctg
tgccctcggggtcagaagctggagatcaggtccctgaatcaagcaaccctacacttcaga
ctcagggaggagccagaaggcgtgtactgtgggttcccagactgtggcctgggcccagag
cacgtggagcagctgtgctggtcactgggccagtgtgaaaccctcagccatctggacctt
gatgcaaacctgatgggcaacgagggactcagctcccttctggagcacctgcagcagaca
cccctctcggggtggcttgacctgagtcacaacggcatctctcaggagggcgccctgagc
ctggtggagaccctgccctccaaccctcgcatccaggaggccttggtgaacctgggcccc
gagcagcgcttccggcttcgcttctccaggcaggaggcatccggggtgacactgaggctg
agccactgccatttgaggccagagcatgtgcccagactggcagctggcctgagccacgcc
ctccagcccatggagctcacgctcaccgagtgcagcctggacctgacacagctaatggtg
ctcctgagctgggtgaagccaccagcaggggtgctggggatcagggtagaggaaccttgg
gtgggcagagctggggtgctggccctgctggaagtctgtgcccaggtctcgggccacatc
acggagataagcatcgctgagacacagctctggctccaactggaattccctcgaaaggaa
gaggatccccagcaggccctcaggctggctggccatggccctgggaccccctacagctgt
cttgtcactcagctgatggagacatgtggcaggctgcagcagctcagcttgtcccaggtg
aacctctgcaacgaaggtatcatcagctcccagctgctgctgagcctcctgccggccctc
tctgagctgagaaccttccggctgacctccagctatgtcagcaccgagagcctcacccac
ctggcatccggcctgagccactgtggccacatggaggagctggacttctccagcagtcag
ttcggtgaggagggcaccaggatgctggtggccgccctggagggaatgcgcgggctgaag
aggctccagctgaatgagaacagcatcggccacacgggctgctgtcacctttcccaggct
ctaagagctgctggcagcttggaggagctgggcttgagccagaaccagattggagacgtc
ggagcccagcacatagctgccaccctgccagagctgcctgagctcaggaagatagacctc
tccaggaatggcatcagcccagctgcaggagcccagctggcagaatcactcatgctttgc
cagcacctggaggtgctcatgcttggctacaacactctgggggatctcacagccctgcag
ctggctcaggggctccctcagcacctgaaggtcctccacctgccaggcagccatttgggc
ccagagggggcactgagcttgggccgggccctggatggacacccacatgtggaggagatc
aacttggcagagaacagcctggctgacggtgtcccacatttctgcaaaggactcccacag
ctcagaaggatttccttgcttttctgcaaaattgatgaccagactgccaagcgcctggcc
accagcttcatgctctgcccagccctggaagaaatactgctgtcctggaatctccttggg
gatgaggcggctgctgagctggcccaggtcctgcctcggatgggccagctgaagaaagta
gacttggagaagaatcagatcaccgcccgtggagcctggcttctgcttcaagggctggcc
caggaggctggcgtcccaatcatctgcctctggaacaatcccatcactcctgacatggcc
cagcgtctgcagagccaggagcccaggctgaactttgccttctttgaccagcagccctga
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integrated database retrieval system
