Dipodomys spectabilis (banner-tailed kangaroo rat): 122116322
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Entry
122116322 CDS
T07891
Symbol
Chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122116322 (Chd9)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122116322 (Chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
122116322
NCBI-ProteinID:
XP_042545917
LinkDB
All DBs
Position
Unknown
AA seq
2935 aa
AA seq
DB search
MTFGNDPIISTTDKLNKLHLEFKSPNCYLILKMTDPIMDFFDDANLFGETLEGLSDDTFV
QPGPVSLVDELNLGAEFEPLHIDSLNHVQSTPTHQKMTDFEQLNQFDSMKFHQVNQSFGS
PAEHMLSPHSQFNCSPIHPPNQPNGLFPDVADGSPMWGHQTAPSISNQNGSPFHQQGHSH
SMHQNKSFVAHPDFALFQANEQQTQCTSLRSQQNRNNLNPGQNSLSQSKNFIDVNVSGPH
RVNVNHPSHITNASASQPSHSIHFSQTSNPSVHFLKCNSHQDGNFNGSSPNMTSCSVSNS
QQFSSHYSFPSNHVSPNSLLQSSAVLAPNHANQTLSDFTGSNSFSPHRRIKQESTQHILN
PSASLNSNNFQMLHSSHPQGNYSSSKLSPVHMNFQDPVDSGAQMSHFSDHVETNGFSTLE
ENLLHQMGSHTEPFTGLDPEELLQEGLLPQFDETTFGQDNSNHVLDHDLDRHFTSHLIAR
PSDMAHTQLQYQARSWHSSFPNHQHLHDRNRLCLQRQPPSSKKSDGSGTYTKLQNTQVRV
MSEKKQRKKVESESKQEKANRIISEAIARAKERGERNIPRVMSPENFPSASVEGKEEKKG
RRMKSKPKDKDSRKTKTCSKLKEKTKIGKLIISLGKKQKRKTESSDEISDAEQMPQHTLK
DQDSQKRRSNRQIKRKKYAEDTEGKQSEEEVKGAMKIKKNSAPLPGEQPLQLFVENPSEE
DAAIVDKILSSRIVKKEISPGVTIDTEEYFVKYKNYSYLHCEWATEQQLLKDKRIQQKIK
RFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYED
STWELKEDVDLAKIEEFEQLQAARPDTRHLDRPPSNIWKKIDQSRDYKNGNQLREYQLEG
LNWLLFNWYNRRNCILADEMGLGKTIQSITFLHEILLTGLKGPFLIIAPLSTIANWEREF
RTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELN
AIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLR
FPSESTFLQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQK
KYYRAILEKNFSFLSKGVGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP
AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER
IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ
AQARCHRIGQDKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQL
SKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDIDQILLRRTKTITIESEGRGSTFAKASFV
ASGNRTDISLDDPNFWQKWAKKAEIDIDTLSGRNSLVIDTPRIRKQTRPFSATKDELAEL
SEAESEGDEKPKLRRPCDRSSGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHD
VEIICRALLAYCLVHYRGDEKIKGFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKV
KTQTSSFDIQKADWLRKYNPEQLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGSECQ
KVFDGVDASDIDVWVPEPDHSEVPADWWDFDADKSLLIGVFKHGYEKYNTIRADPALCFL
ERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPAIFKDDIEDDVSSPGDLVIADGDGQV
MEGDKIYWPTQSALTTRLRRLITAYQRTNKNRQIQQIQPTFSVPASVTQPICEETTLSPK
MAAKIERQQRWTRREEADFYRVVSTFGVVFDPNRGRFDWTKFRAMARLHKKTDDSLEKYL
YSFVSMCRRVCRLPSKDELVDPNIFIQPITEERASRTLYRIELLRKVREQALRHPQLFER
LKLCHPNPDLPVWWECGLHDRDLLIGAAKHGVSRTDYHILRDPELSFMTAQRNYSQSKMA
HSRTSTPLLQQYQVALSASSLTSLPRLLDAKGILEDIKVKNENVKEEPPSSEEESMSSVD
TRTIIKSEPVSPKNGILSQAAEDQKSGGKGETDRRMVSARTEPLTPNPASKKQRIHKRGS
ESSSDSDSESERSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSS
SSSSSEESDSEEEEAQKRAEGTPHMKAYDEESVASLSTTQDETQDSFQANNGTPESAYLL
QGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARRSYDANTVASFYTTKLLDSPGAA
TEYSEPSVPTPPGAGVKEEQDQSTQMSKVKKHVREKEFTVKIKDEGGLKLTFQKQGLAQK
RPFDSEDGALGQQQYLTRLRELQSASETSLINFPKSMPLSGTSIQSTSGANGVILDNQPL
VKKRRGRRKNVEGVDIMFFNKNKPPNHVTLSLTTSQISPGLNPALSYTQPQRIPDTESPV
PVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDLGAFIPKMQLHEGRPKQKRHRCRNP
NKLDINSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENSEYGVAPEWGDVVRQSG
FLPESMYERILTGPVVREEVSRRGRRPKSGIAKATAAAAAAAAAVSATNVTGNPLLTNGL
LPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPAGLSSGGDSKNMAAMFPMLLSGMAGLPN
LLGMGGLLTKSAESGAEEKKGNVSKELELKKERTESQNPENGGENSVSSSPSTSSTAALN
TAAATNPLALNPLLLSNILYPGMLLTPGLNLHIPTLSQSNNFDVQKNKNSDLGLSKSVEE
KEEDSRVKDQEGKGGPEPSPLNENSTDEGSEKADASSGSDSTSSSSEDSDSSNED
NT seq
8808 nt
NT seq
+upstream
nt +downstream
nt
atgacctttggaaatgatccaataatatctactacagacaagctaaataaactccatttg
gagtttaagagcccaaattgttacttaattttgaagatgacagatccaatcatggacttc
tttgatgatgccaatctttttggtgagactttagaaggattgtcagatgatacatttgta
caaccaggacctgtctcactagttgatgaattgaacttgggtgcagaatttgaacctttg
cacatagactcattgaaccatgttcaaagtactccaacacatcagaagatgactgatttt
gaacagttaaatcagtttgactcaatgaaatttcaccaagttaatcaatctttcggaagc
ccagctgaacatatgttatctccacattctcaatttaattgttctcctatccacccccct
aaccaacccaatggtttgtttccagatgtagcagatggcagtccaatgtggggccatcag
acagctcctagcatttctaatcaaaatggatctccttttcaccaacaaggacattcacac
tctatgcatcaaaataaaagctttgtggcacaccctgactttgccttatttcaggccaat
gaacaacaaacacagtgtacttcattacgctcacaacagaacagaaataatcttaatcca
gggcaaaactctcttagccaatctaaaaattttatagatgttaatgtttctggtccacat
agagtcaatgttaatcacccatctcatattactaatgcatctgcttcacaaccatctcat
tcaattcatttttctcaaacatcaaacccttcagtacacttccttaagtgtaacagtcat
caagacggaaattttaatggatcatctccaaatatgacttcttgttctgtcagcaattca
cagcagttttcttcacattattcctttcccagtaatcatgtatcacccaacagtctcctt
caatcctctgcagttcttgcacctaatcatgcaaatcagactttatctgattttactgga
agtaattccttttcgcctcataggagaatcaagcaagaatccactcagcatatcctaaac
cccagtgcatcattgaattcaaataatttccaaatgttgcattcatcacatcctcagggt
aattatagcagttcaaaattatctcctgtgcacatgaacttccaagatcctgttgactca
ggagctcaaatgagccatttcagtgatcatgtagaaaccaatggtttttcaactttagaa
gagaatttacttcatcaaatgggatctcatactgagccatttacaggacttgacccagag
gaacttcttcaggagggtcttcttccccaatttgatgagacaacatttggacaagataat
tcaaatcatgttttggatcatgaccttgatcgacactttacttcccatcttatagcacga
ccttctgatatggctcatactcagttgcaatatcaggctcggagttggcattcatcattt
cctaatcatcagcatttacatgacagaaatcgcctgtgtttacagcgacagcctccatct
tccaagaagagtgatggttctgggacatatactaagttgcagaatacccaggtgagggtc
atgtctgagaagaagcagagaaaaaaagtggaatcagaaagcaagcaagaaaaggctaat
cgtattatatcagaggccatagcaagagcaaaggaacgtggggagcgcaatattccacgg
gtaatgagtcctgaaaactttcctagtgcttcagttgaaggaaaagaggaaaagaaaggt
agaaggatgaaatctaaaccaaaggacaaagacagcagaaaaacaaaaacttgttctaag
ttaaaagagaagacaaaaattggcaaactcattatttcattgggtaagaaacaaaaaaga
aagactgagtcttcagatgaaatatctgatgcagagcagatgccacaacacacattgaaa
gaccaagactctcaaaaaagaaggtctaatcgacaaattaaaagaaaaaagtatgcagaa
gatacagaaggaaaacaatctgaagaagaggttaaaggtgctatgaaaataaaaaagaat
tcagctcctttacctggtgaacagcctttacaattatttgtggagaatccaagtgaagaa
gatgctgcaattgtagataaaatactatcttctagaattgtaaaaaaggaaatatcacct
ggagtgacgattgatacagaagaatattttgtgaaatataaaaactactcctatcttcac
tgtgaatgggccacagaacagcagctgttgaaagataaaaggattcagcagaaaatcaaa
cgattcaaattgagacaagcacaaagagcacatttttttgcagatatggaagaagaacca
tttaatccagactacgttgaagtagacagagtattagaagtctctttttgtgaagataaa
gatactggtgagcctgtcatttactatttggtcaagtggtgctcattgccatatgaagat
agtacatgggaattaaaagaagatgtagatcttgcaaaaatagaagagtttgaacaattg
caagctgcaaggcctgacacaagacatttggatcgtcctccctctaatatttggaagaaa
atagatcaatccagggactataaaaatgggaatcaactcagggaatatcaactagaaggt
cttaactggctcttgttcaactggtacaataggcgaaactgcattttagcagatgaaatg
ggtcttgggaaaaccattcaatcaattacgttcctccatgaaatccttctgactggctta
aaaggacctttcctgattattgcacctctttctaccattgcaaactgggagagagaattt
cgtacgtggactgatattaatgttgtggtttatcatgggagcctaattagcagacagatg
atacagcaatatgagatgtacttcagggattcacaggggcgtatcatacgaggagcttac
agattccaagctatcatcaccacatttgaaatgattcttgggggctgtggtgagcttaat
gccattgaatggcgatgtgtgataattgatgaagcacacaggttaaaaaataaaaattgt
aaactactggaaggcttgaaactcatgaatctggaacacaaggtccttttgactggcact
cctctccaaaatacagttgaagaactattcagtcttcttcattttcttgaacctttaagg
tttccttctgaatcaacatttttgcaagaatttggagatcttaaaacagaggaacaggtg
cagaaacttcaggccattctgaaaccaatgatgttgaggcgattaaaggaagatgtagaa
aagaaattagcacctaaggaagaaaccatcattgaagttgagcttactaacatacaaaag
aaatattacagggctattttggagaagaacttttcatttttatccaaaggagtaggacaa
actaatgtacctaacttggtcaataccatgatggagctcaggaaatgctgtaatcatcca
tatcttattaaaggtgccgaggaaaaaatacttggtgaatttagagatacatataatcca
gctgcttctgattttcaccttcaagcaatgatccagtctgctggtaaattggttttaatt
gacaaattgcttcccaaaatgaaagcaggaggtcataaagtactcatcttctctcagatg
gttcgctgccttgatatcctggaagactatctcatacataaaagatatttatatgagcga
attgatggaagagtcagagggaatctccgacaagctgcaatagatcgatttagtaaacct
gattcagatcgatttgtttttctcctttgtacccgagctggtgggctgggcatcaattta
actgcagctgatacatgtataatttttgattctgattggaatcctcaaaatgaccttcag
gcccaagctcgttgccacagaattggtcaggacaaagcagttaaagtctacagattagta
actcgtaactcctatgagagagagatgtttgaccgggccagtctgaaactgggccttgat
aaagctgtgctacagagcatgagtggaagagaaagtaatgttggtggtattcaacagctt
tctaaaaaggaaatagaagatttgcttagaagaggtgcttatggtgccattatggaggag
gaagacgaaggctccaaattctgtgaagaggacattgatcagattttattacgccgtaca
aaaactattactattgagtcagaaggtcgtgggtcaacatttgccaaggcaagttttgtg
gcatctggaaacaggacagatatttccttggatgatcccaatttctggcaaaaatgggct
aagaaagcagaaatcgatatagataccctcagtggcagaaatagcttggttattgacact
ccaagaattaggaagcaaacaagaccctttagtgccacaaaagatgaattggctgaatta
tctgaagctgaaagtgaaggagatgaaaaacctaaacttcggagaccctgtgatcgctcc
agtggctatggaagaactgaatgctttagagtagagaaaaacctgctagtttatggatgg
ggccgatggagagaaattctttctcatggacgttttaaaaggcagctaaatgagcatgat
gtagaaataatttgccgagctcttttagcatattgtctcgttcattaccgaggagatgaa
aaaattaaaggtttcatctgggatctcattacaccaactgaagatggacagacacgtgag
ctacaaaatcatctaggcctgtcagctcctgtgcccaggggtcggaaagggaagaaagta
aaaactcaaacaagctcatttgacatacaaaaagcagactggcttcgaaaatacaatcct
gagcaactacttcaagatgaaggctacaaaaaacatataaaacaccattgtaataaggtt
ttgcttcgtgtgaggatgctatattatctgaagcaagaagttattggaagtgagtgtcag
aaagtatttgatggagttgatgcaagtgacattgatgtttgggtaccagaaccagatcat
tcagaagttcctgctgattggtgggactttgatgctgacaagtcactccttattggagta
tttaaacacggttatgaaaaatataacactattcgagcagacccagcattatgcttcttg
gaaagagtgggaaaacctgatgacaaagcagtggctgcagaacagagagcaaatgattat
atggatggagatgttgaagatccagaatataaacctgctcctgccatttttaaagatgat
atagaggatgatgtttcctcacctggagatctcgttatagcagatggagatggtcaagtg
atggaaggggataaaatttattggcctactcagtcagcattaaccacaagactgagacgt
ctcatcactgcctatcagcgaactaataaaaacagacaaatccagcagatacagccaacc
ttctcagtgcctgccagcgtgactcagcctatttgtgaagaaactactcttagtcctaaa
atggcagccaagatagagaggcagcagagatggacaagaagagaagaagctgatttttat
agagttgtatctacatttggagtagtttttgaccctaacagaggccgatttgattggaca
aaatttcgagctatggcccgtctacacaagaaaactgatgatagtttggaaaaatatttg
tactcatttgtttcgatgtgtcggcgggtttgtcgtcttccttccaaagatgaattggtg
gatccaaatatttttatccaaccaatcacagaagaacgtgcttcgaggactttgtatcgc
attgaacttctaagaaaagtacgggaacaagcccttcgacatccacagttgtttgaacgc
ttgaagctctgccatccaaatccagatttaccagtctggtgggaatgtggccttcatgat
agggatttgcttattggtgctgctaaacatggggtgagccgaacagactatcacattctt
cgtgatcctgaactctcctttatgacagctcaaaggaactacagtcaaagtaagatggcg
cattcaagaacttctaccccacttttacagcaatatcaagtagcactttctgcttcttct
cttacctctctgcctaggctcctagatgctaaaggtattctagaggatataaaagtgaaa
aatgaaaacgttaaagaagagcctccttcttctgaagaagaatctatgtcttctgtggat
accaggacaataataaagtctgagcctgtaagtccaaagaatggaattttgtcacaggct
gctgaagaccagaaatctggtggaaaaggtgaaacagacagacgcatggtttcagccaga
acagaacctctaactccaaacccagcttctaagaaacagagaatccacaaaagaggatca
gagtctagttctgattctgactctgagtctgagagatcatcctgttcttccagatcatca
tcttcttcgtcttcctcctcttcttgttcccattctcgatcaggctctagttcttcttca
tcctcatcttgttcttcagcatcttcatcttcctcctcctcctcatcatcgtcatcatct
tcttcatcttcatcagaagaaagtgacagtgaagaagaggaagcccaaaagcgagcagaa
ggtactcctcacatgaaagcttatgatgaagaaagtgttgcatcactgagcactacacag
gatgagacccaggatagtttccaagctaacaacgggactccagagtctgcttacctctta
caaggtggatacatgctggcagcctcatattggccaaaggatcgggtgatgatcaaccgg
ttggacagtatttgtcaaacagttcttaaagggaagtggccttcagctagaagaagttat
gatgctaacacagtggcttctttctataccacaaaactgctggacagccctggagcagct
acagaatatagtgagcccagtgttcccactcccccaggtgctggtgtcaaagaagaacaa
gaccagtcaacacaaatgtcaaaggtgaagaagcatgtacgagaaaaggagtttacagtg
aaaatcaaagacgaaggtggtttgaagttgacatttcagaagcaggggcttgctcagaaa
agaccgtttgatagtgaagatggtgctctggggcaacaacagtacctcacccgacttcgg
gagcttcaaagtgcatcagagacaagcctgatcaattttccaaaatctatgcctctgtca
ggtacctccattcagtcaacatctggtgccaatggagtaatactagataaccagcctctg
gtcaagaaaagacgaggaaggaggaagaatgtagaaggtgtcgacatcatgttttttaac
aagaataaaccacctaatcatgttactttaagcttaaccacctcacagatttccccagga
ctaaatccagccctatcctatactcaacctcaaagaattccagatacagaaagtccagtt
cctgttattaatcttaaagatggaacaagacttgcaggagatgatgcaccgaagagaaag
gatttggaaaaatggcttaaagaacacccaggttatgtggaagatttaggagcttttatt
cctaaaatgcaactacatgagggaaggcctaaacaaaaaaggcatcgttgtagaaatccc
aataaacttgatattaatagcctcactggagaagaacgtgttcagctgattaacagaaga
aatgccagaaaggttggaggtgcttttgctccccctttgaaagatttatgtagattctta
aaagaaaattcagaatatggagtagctcctgaatggggagatgttgttagacaatctggg
tttcttccagaaagtatgtatgaacgcattctcaccggtcctgttgtaagagaggaagtg
agccggcgagggagacgacctaaaagtggaattgcaaaggccaccgcagcagcagcagca
gcagcagcagctgtatctgccaccaatgttacaggcaatcctttgttaaccaatggatta
ctcccaggtgtggatctaacaactcttcaggccttacaacaaaacctgcaaaacttgcag
tcactgcaagttactgctgggcttatgggaatgcctgctggcctttcttcaggaggagat
agtaaaaacatggctgctatgttccccatgctgctgtcaggaatggctggattaccaaat
ctgttgggcatgggaggactcctgacaaaatctgcagaatctggggcagaagaaaaaaag
ggaaatgtttccaaggagctagaattaaaaaaagaaaggacagagagccaaaatccagag
aatggtggagaaaactctgtgtcaagttctccttcaacgtcctctactgctgcattaaat
acagctgcagctaccaaccctttagctcttaacccactattactatctaatatactttat
ccagggatgcttctcactccaggccttaatcttcatattccaaccttgtcccagtctaat
aattttgatgtacagaaaaacaaaaacagtgacttaggcttgtctaagtctgtagaagaa
aaagaagaagattccagagttaaagatcaggaaggcaaggggggacctgaacctagtcct
ctcaatgaaaacagcacagatgagggttcagagaaagcagatgcttcatcagggtcggat
agtacatcatcgtcctcggaggattccgattctagtaatgaagactaa
DBGET
integrated database retrieval system
