Dipodomys spectabilis (banner-tailed kangaroo rat): 122116360
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Entry
122116360 CDS
T07891
Symbol
Atg4a
Name
(RefSeq) cysteine protease ATG4A isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04136
Autophagy - other
dsp04140
Autophagy - animal
dsp04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122116360 (Atg4a)
04140 Autophagy - animal
122116360 (Atg4a)
04136 Autophagy - other
122116360 (Atg4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dsp01002
]
122116360 (Atg4a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122116360 (Atg4a)
03029 Mitochondrial biogenesis [BR:
dsp03029
]
122116360 (Atg4a)
Peptidases and inhibitors [BR:
dsp01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
122116360 (Atg4a)
Membrane trafficking [BR:
dsp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
122116360 (Atg4a)
Mitochondrial biogenesis [BR:
dsp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122116360 (Atg4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
122116360
NCBI-ProteinID:
XP_042545944
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MESVLSKYENQITIFTDYLEEFPDTDELVWILGKQHLLKTEKAKLLSDISARLWFTYRKK
FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWQKQKEQPKEYQRILQCFLD
RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE
DIKKMCCVPPLGANAAGENPPDFVTASNQSQGISAFCPAWKPLLLIVPLRLGINQINPVY
VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIFLDPHTTQTFVDTEENGTVDDQTF
HCLQSPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHPSHWP
PFVPPTKPEVTTTGAEFIDSTEQLEDFDLEEDFEILSV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagttttatccaagtatgaaaaccagattactatattcactgactacctagaa
gaatttccagatacagatgaactggtgtggatcctggggaagcagcatctccttaaaacg
gaaaaagctaagctgttgtctgatataagtgctcgtctatggtttacatacagaaagaaa
ttttcaccaattgggggaacaggtccttcatctgatgctggctggggatgcatgctacgc
tgtggacagatgatgttggctcaagctcttatctgtagacatttgggaagggactggaac
tggcagaaacaaaaagaacaacccaaagaatatcaacggattctacaatgcttcttagat
agaaaagactgttgttactctatccaccaaatggcacaaatgggtgtaggagaagggaaa
tcaattggcgaatggtttggaccaaatacagttgcacaggtgttaaaaaaacttgcttta
tttgatgaatggaattccttggctgtttatgtttcaatggataacacagtggtcattgaa
gatatcaaaaaaatgtgctgtgttcctcccctgggtgccaatgcagctggtgagaatcct
cctgattttgtgactgcttctaaccagagtcaaggcatctctgccttctgcccagcctgg
aaacccctgctgctcattgtgccccttcgtctgggcataaaccaaatcaatcctgtgtat
gtcgatgcattcaaagagtgttttaagatgccacagtctttaggggcattaggaggaaaa
ccaaataacgcctattatttcataggattcttaggtaatgagctcatcttcttggaccct
cacacaacccagacttttgttgacactgaagagaatggaactgttgatgaccagactttt
cattgcctgcagtccccacagcgaatgaacatcctcaacttggatccctctgtggcactg
gggtttttctgcaaagaagaaaaagactttgatagttggtgtagcctcgttcagaaggaa
attctgaaggaaaatttaaggatgtttgaattagttcagaaacatccatcacactggcct
ccatttgtgcctccaaccaagccagaagtgacaaccactggagcagaattcattgattct
actgaacaactggaggactttgacctggaagaagattttgagattctaagcgtgtag
DBGET
integrated database retrieval system
