Dipodomys spectabilis (banner-tailed kangaroo rat): 122116472
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Entry
122116472 CDS
T07891
Name
(RefSeq) ubiquilin-3-like
KO
K04523
ubiquilin
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04141
Protein processing in endoplasmic reticulum
dsp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122116472
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122116472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122116472
03051 Proteasome [BR:
dsp03051
]
122116472
Membrane trafficking [BR:
dsp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
122116472
Proteasome [BR:
dsp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
122116472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
YukD
UBA_7
Dsc3_N
Rad60-SLD_2
UBA_HOIP
Ubiquitin_5
APOBEC1
Motif
Other DBs
NCBI-GeneID:
122116472
NCBI-ProteinID:
XP_042546046
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MAKSGEALPQDSSAPAQDPHLIKVTVKTPKDKEDFSVTDTCTIWQLKQEISQRFKAHPDQ
LVLIFAGKILKDADSLAQCGVRDGLTVHLVIKMQRRTIGTECPAAVVPAPGPSPGSLAQP
TSIYPTDGTTTFSLGVLTGLNGLGLTSGSFPDQPSSLMWQHVSVPEFVAQLIDDPFIQGL
LSNTGLVRQLVLDNPHIQQLIQHNPEIGHILNNPEIMRQTLEFLRNPAMMQEMMRSQDRA
LSNLESIPGGYNVLRTMYTDIMDPMLNAVQEQFGGNPFATTNANAATSSSQPSRTENCDP
LPNPWTSTHRGGPGGRQGRQPEDQDTSEIRNRVPSFLGNIGLFDYFQQLHETGPSLGSYF
QGSVSSSNPSQGQLPPPVNRGPPVSPSTQESGAGQPLPTESVAVKGKSSCPSFLRYPPES
STGQGGGQNGLGDDSIGHSPSMPDLVSGDSGNRSPFVPSPSSPMTAIPRVPESPWLSSSG
YSRSLRTDGMHQAPQLEDEMHQQLPLLLHLQTAMENPRAMQALLQIEQGLQVLATESPRL
LLWFMPWLVGLGGTAGGTESREDTLLSEDLHSAPDPQVSPVQGSAEQDLHSSPFLQMFQA
LSTTNPQQLQPEAHFQVQLEQLRAMGFLNSEANLQALIATGGDVDAAVEKLRQS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagtggagaggctctgccacaggacagctcagcaccggcccaggatccccac
ctcatcaaggtgacagtgaagacgcccaaggacaaggaagatttctcagtgacagacaca
tgcaccatctggcagctgaagcaagagatatcacagcgctttaaggcccatccagatcag
ctggtcctaatatttgctggaaagatcctcaaggacgcggactcactggcacagtgtgga
gtacgagatggtctcaccgttcacctggtcatcaagatgcagcgccgcaccattggcacc
gaatgcccagctgctgtagttcctgccccaggcccaagtcccggatcactcgctcagcca
acctccatttacccaacagatgggacaaccaccttcagcttaggtgtcctcacaggcctc
aatgggttgggcctgacctctggcagttttcctgaccagccaagctcactgatgtggcag
catgtatcagtgcccgagtttgtggctcagctcattgatgatcccttcatccaaggcctg
ctgtccaacacaggtctggtgcgccagttggttctagacaatccccatatacagcagctg
atccagcacaaccctgagattgggcatattctcaacaaccctgaaatcatgcggcagacg
ctggagtttttacgtaaccctgccatgatgcaagagatgatgcgtagccaggaccgggca
ctcagtaacctggagagcatccccggtggctacaatgtgcttcgtaccatgtacacagat
attatggacccaatgctgaatgcagtccaggagcagtttggtggcaatccatttgctacc
acgaatgctaatgctgccaccagtagcagccaaccttcaaggacagagaactgtgatcct
ctcccaaacccctggacttccacacacagaggaggcccaggtggcaggcaaggaaggcag
cctgaggaccaagatacatctgaaattagaaacagggttccaagctttctgggtaatata
gggctgtttgattatttccagcaattgcatgagacaggcccatccctggggtcctatttt
caggggtctgtatcttcctccaatccaagccaaggacaactaccaccaccagttaacaga
ggtcccccagtgtcaccatccacccaggaatctggggcaggacagcctctccccacagag
tcagtagcagtcaagggcaagtcctcctgcccatcttttctgagatatcccccggagagc
agcactggacaaggtggaggccaaaatggcctaggggatgactctattggccatagccct
agcatgccagatctggtgtctggagattctggcaacaggtccccatttgttccttcacca
tcttcccctatgacagctattcctagagtccctgaatctccctggctgtcttcatcaggt
tattcaagatctctgaggacagatggcatgcatcaggccccgcagttggaggatgagatg
caccaacagcttccattactgctgcacctgcagacagccatggaaaaccctcgggccatg
caagccctgctgcagatagagcagggtctgcaggtcctggctaccgaatcacctcgcctc
ttactctggttcatgccttggctagtaggactcggtggtacagcaggaggtacagagtct
agagaagatacccttctatcagaggatctccactcagccccagatcctcaggtttcccca
gtacaggggtctgcagagcaagatctccattcctctcccttcctccaaatgttccaagcc
ttatctactaccaatcctcagcagctgcaacccgaggctcatttccaggtgcaacttgag
caactgagagccatgggctttctgaattctgaagccaatcttcaggctctcattgctacc
gggggtgacgtggatgctgctgtggagaaactgaggcagtcatag
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