Dipodomys spectabilis (banner-tailed kangaroo rat): 122116700
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Entry
122116700 CDS
T07891
Symbol
Atg16l2
Name
(RefSeq) protein Atg16l2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122116700 (Atg16l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122116700 (Atg16l2)
03029 Mitochondrial biogenesis [BR:
dsp03029
]
122116700 (Atg16l2)
Membrane trafficking [BR:
dsp04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
122116700 (Atg16l2)
Others
Specific organelles associated proteins
Auto phagosome
122116700 (Atg16l2)
Mitochondrial biogenesis [BR:
dsp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122116700 (Atg16l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
WD40_RFWD3
DUF5693
Motif
Other DBs
NCBI-GeneID:
122116700
NCBI-ProteinID:
XP_042546330
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MAGPSDPSAPAALWKRHIVRQLRQRDRTQKALFLELVPAYNHLLEKAELLANFSEKLQPQ
PNDVTPSTHQGSWEVGGEEESSPDSDQVSSLATLKLKWQEEEEGLQLVCGEMAYQVVQKS
AALGTMQSELEERQGRLAALEARVELLQEARAQHALKVEDQRAQNAALRSAYEALRAHSE
QQEAALRRLQEEARDLLERLVQRKARAAAERNLRNERRERAHQARVSQELKKAAKRTVSI
SKSPDTSGDGIRQETETQAVEPESLEREACEKWKRPFRSASATSLTLSRCVDVVKGLLDF
KKRRGHSVGGAPEQLYQSIPVCVAARLPTQVQDVLDAHLSEINAVQFGPNSSLLATGGDD
RLIHLWNVVGGRLEAKQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGEAQSKET
LSGHKDKVTAAKFKLTKHQAVTGSRDRTVKEWDLGRAYCSRTINVISYCNDVVCGDHIII
SGHNDQKIRFWDSRLPSCTQVIPVQGRVTSLSLSHDQMHLLSCSRDDTLKVIDLRVSNIR
QVFRADGFKCGSDWTKAVFSPDRSYALAGSWDGALYIWNVDTGKLESSLRGPHCAAVNAV
AWCYSGSHVVSVDQARKIVLWH
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcccagcgaccccagcgcccctgcagctctctggaaacgccacatcgtgcgg
cagctgcggcaacgggaccgcacgcaaaaggcactcttcctggagctggtgccggcctat
aatcatctcctagagaaggccgagctattagccaacttctcagagaagctgcagccacaa
ccaaatgacgtcacccctagtactcatcagggctcctgggaggttggcggggaggaggag
tcaagccctgactcagaccaagtctcatcactagccactctgaagctgaagtggcaggag
gaagaagagggtctccagctggtctgtggtgagatggcctaccaggtggtgcagaagagt
gcagccctgggcaccatgcagtcagagctggaggagcggcagggcaggctggcggctctg
gaggcccgtgtggagctgctgcaggaggctcgggcgcaacacgccctgaaggtggaggat
caacgtgcccagaacgcagcgctgcgatcggcctacgaggccctgcgtgcgcactcggag
caacaggaggcggcactgcgcaggctccaggaggaggcgcgcgacctactggagaggctt
gtgcagcgcaaggcgcgtgcggcagctgagcgcaacctgcgcaacgaacgccgggagcga
gcccaccaggcacgggtgtcccaggagctgaagaaggctgccaagaggactgtgagcatc
agcaagagcccagacacctcaggagatggaatcagacaggagactgagactcaggcagtt
gagcccgagtccctggagagggaggcttgtgaaaaatggaagaggcccttcaggtctgcc
tcggccacctccctgacactgtcccgctgtgtggatgtggtgaaggggctgctggacttc
aagaagaggagaggtcactcggttggaggggcccctgagcagctataccaaagcatacct
gtgtgtgtagctgcccgacttcctacccaggttcaggatgtcctggatgcccacctctct
gagatcaatgctgttcagtttggccccaacagcagcctcctggccactggcggggatgac
cgtcttatccacctctggaatgttgtgggaggtcgcctagaggccaaacagacacttgaa
ggagctggtggcagcatcaccagtgtggacttcgacccctcaggctcccaggttttggca
gctacttacaaccaggccgctcagctctggaaggtgggagaggcacagtccaaggagaca
ctatctggacacaaggacaaggtgacagctgcaaaattcaagctcacgaagcaccaggcg
gtgactgggagccgagaccgaacagtgaaggaatgggacctcggccgtgcctactgttca
agaacaatcaatgtcatttcctattgtaatgacgtggtatgcggggaccacatcatcatt
agtggtcacaatgaccagaagatccggttctgggacagcaggttacccagctgtacccag
gtcatccctgtgcagggccgggttacttccctgagcctcagccatgaccaaatgcacctg
cttagctgttcccgagacgatacactcaaggtgatcgacctgcgtgttagcaatatccga
caggtgttcagagctgatggcttcaaatgcggttctgactggaccaaagccgtgttcagc
cctgacagaagctatgcactggcaggatcctgggacggcgccctctacatctggaatgtt
gacacagggaaactggagagcagccttcgggggccccactgtgctgctgtgaatgctgtg
gcctggtgctactctgggagccacgttgtgagcgtggaccaggccaggaagattgtgctc
tggcactag
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integrated database retrieval system
