KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122116700
Entry
122116700         CDS       T07891                                 
Symbol
Atg16l2
Name
(RefSeq) protein Atg16l2 isoform X1
  KO
K20868  autophagy-related protein 16-2
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04140  Autophagy - animal
dsp04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    122116700 (Atg16l2)
   04140 Autophagy - animal
    122116700 (Atg16l2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dsp04131]
    122116700 (Atg16l2)
   03029 Mitochondrial biogenesis [BR:dsp03029]
    122116700 (Atg16l2)
Membrane trafficking [BR:dsp04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    122116700 (Atg16l2)
 Others
  Specific organelles associated proteins
   Auto phagosome
    122116700 (Atg16l2)
Mitochondrial biogenesis [BR:dsp03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    122116700 (Atg16l2)
SSDB
Motif
Pfam: ATG16 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WDR55 WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th DSE1_N Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_TEP1_C CFAP251_N Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_WDR19_1st ASA1 WD40_RFWD3 DUF5693
Other DBs
NCBI-GeneID: 122116700
NCBI-ProteinID: XP_042546330
LinkDB
Position
Unknown
AA seq 622 aa
MAGPSDPSAPAALWKRHIVRQLRQRDRTQKALFLELVPAYNHLLEKAELLANFSEKLQPQ
PNDVTPSTHQGSWEVGGEEESSPDSDQVSSLATLKLKWQEEEEGLQLVCGEMAYQVVQKS
AALGTMQSELEERQGRLAALEARVELLQEARAQHALKVEDQRAQNAALRSAYEALRAHSE
QQEAALRRLQEEARDLLERLVQRKARAAAERNLRNERRERAHQARVSQELKKAAKRTVSI
SKSPDTSGDGIRQETETQAVEPESLEREACEKWKRPFRSASATSLTLSRCVDVVKGLLDF
KKRRGHSVGGAPEQLYQSIPVCVAARLPTQVQDVLDAHLSEINAVQFGPNSSLLATGGDD
RLIHLWNVVGGRLEAKQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGEAQSKET
LSGHKDKVTAAKFKLTKHQAVTGSRDRTVKEWDLGRAYCSRTINVISYCNDVVCGDHIII
SGHNDQKIRFWDSRLPSCTQVIPVQGRVTSLSLSHDQMHLLSCSRDDTLKVIDLRVSNIR
QVFRADGFKCGSDWTKAVFSPDRSYALAGSWDGALYIWNVDTGKLESSLRGPHCAAVNAV
AWCYSGSHVVSVDQARKIVLWH
NT seq 1869 nt   +upstreamnt  +downstreamnt
atggccgggcccagcgaccccagcgcccctgcagctctctggaaacgccacatcgtgcgg
cagctgcggcaacgggaccgcacgcaaaaggcactcttcctggagctggtgccggcctat
aatcatctcctagagaaggccgagctattagccaacttctcagagaagctgcagccacaa
ccaaatgacgtcacccctagtactcatcagggctcctgggaggttggcggggaggaggag
tcaagccctgactcagaccaagtctcatcactagccactctgaagctgaagtggcaggag
gaagaagagggtctccagctggtctgtggtgagatggcctaccaggtggtgcagaagagt
gcagccctgggcaccatgcagtcagagctggaggagcggcagggcaggctggcggctctg
gaggcccgtgtggagctgctgcaggaggctcgggcgcaacacgccctgaaggtggaggat
caacgtgcccagaacgcagcgctgcgatcggcctacgaggccctgcgtgcgcactcggag
caacaggaggcggcactgcgcaggctccaggaggaggcgcgcgacctactggagaggctt
gtgcagcgcaaggcgcgtgcggcagctgagcgcaacctgcgcaacgaacgccgggagcga
gcccaccaggcacgggtgtcccaggagctgaagaaggctgccaagaggactgtgagcatc
agcaagagcccagacacctcaggagatggaatcagacaggagactgagactcaggcagtt
gagcccgagtccctggagagggaggcttgtgaaaaatggaagaggcccttcaggtctgcc
tcggccacctccctgacactgtcccgctgtgtggatgtggtgaaggggctgctggacttc
aagaagaggagaggtcactcggttggaggggcccctgagcagctataccaaagcatacct
gtgtgtgtagctgcccgacttcctacccaggttcaggatgtcctggatgcccacctctct
gagatcaatgctgttcagtttggccccaacagcagcctcctggccactggcggggatgac
cgtcttatccacctctggaatgttgtgggaggtcgcctagaggccaaacagacacttgaa
ggagctggtggcagcatcaccagtgtggacttcgacccctcaggctcccaggttttggca
gctacttacaaccaggccgctcagctctggaaggtgggagaggcacagtccaaggagaca
ctatctggacacaaggacaaggtgacagctgcaaaattcaagctcacgaagcaccaggcg
gtgactgggagccgagaccgaacagtgaaggaatgggacctcggccgtgcctactgttca
agaacaatcaatgtcatttcctattgtaatgacgtggtatgcggggaccacatcatcatt
agtggtcacaatgaccagaagatccggttctgggacagcaggttacccagctgtacccag
gtcatccctgtgcagggccgggttacttccctgagcctcagccatgaccaaatgcacctg
cttagctgttcccgagacgatacactcaaggtgatcgacctgcgtgttagcaatatccga
caggtgttcagagctgatggcttcaaatgcggttctgactggaccaaagccgtgttcagc
cctgacagaagctatgcactggcaggatcctgggacggcgccctctacatctggaatgtt
gacacagggaaactggagagcagccttcgggggccccactgtgctgctgtgaatgctgtg
gcctggtgctactctgggagccacgttgtgagcgtggaccaggccaggaagattgtgctc
tggcactag

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