KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122116947
Entry
122116947         CDS       T07891                                 
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
  KO
K11864  BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03440  Homologous recombination
dsp04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    122116947
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    122116947
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dsp01002]
    122116947
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dsp04121]
    122116947
   03036 Chromosome and associated proteins [BR:dsp03036]
    122116947
   03400 DNA repair and recombination proteins [BR:dsp03400]
    122116947
Peptidases and inhibitors [BR:dsp01002]
 Metallo peptidases
  Family M67
   122116947
Ubiquitin system [BR:dsp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    122116947
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    122116947
   BRISC complex
    122116947
Chromosome and associated proteins [BR:dsp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    BRISC complex
     122116947
DNA repair and recombination proteins [BR:dsp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     122116947
SSDB
Motif
Pfam: JAB BRCC36_C Prok-JAB
Other DBs
NCBI-GeneID: 122116947
NCBI-ProteinID: XP_042546465
LinkDB
Position
Unknown
AA seq 285 aa
MAVQAVHLDSDVFLVCVNHALSTDKEEVMGLCIGVLKEEEGSNSGCGSSGEALGTVAAQA
RAARIVHIRSVIILPRSDKRKDRVEISPEQLSAASAETERLAALTGSPLRVVGWYHSHPH
ITVWPSHVDIRTQAAYQMMDPGFVGIIFSCFVEDKNTNTGQIAYTCFQSARAPRSAEYER
VDVPLHVLPRASIGKACLQSLVELPKILWQEELASYRRMCGRPDQDPVSRIRNASAYVDH
VCGQVSAISDPLLQWLENRVEQNQEFLQELTQEKKELMEKLSSLK
NT seq 858 nt   +upstreamnt  +downstreamnt
atggcggttcaggcggttcacctcgattccgacgttttcctcgtgtgcgtcaaccacgct
ctgagcaccgataaagaggaggtaatgggcctgtgtattggggtgctgaaggaggaagag
gggagtaactccggttgtgggagttccggcgaggctctgggcaccgtggctgcgcaggcc
cgggcggcccggatcgtccatattcgctccgtcatcatcttgccgcggtcggacaagagg
aaggaccgggtggagatctccccggagcagctgtcggcggcctcggccgagacggagagg
ctggcggcgctcaccgggagccccctgcgggtggtgggctggtaccactcccacccgcac
atcaccgtctggccgtcccacgtggacatccgcacccaggccgcctaccagatgatggac
ccaggcttcgtcgggatcatcttctcctgcttcgtggaggataagaacacgaacaccggc
cagatagcttacacctgcttccaatccgcccgcgccccgaggagcgccgagtatgagagg
gtcgatgtccccctccacgtgctacctcgtgccagcatcgggaaagcgtgcctccagtcg
ctagtggagctgcccaagatcctgtggcaggaagaactggcctcgtataggaggatgtgc
ggccgtcccgatcaggacccggtatccaggatccgcaatgcctcggcgtacgtggatcat
gtgtgcggtcaagtgtccgcgatcagcgatcccctcctccagtggctggagaacagagtc
gagcaaaaccaagagtttctgcaggagttgacccaagagaagaaagagcttatggaaaaa
ctttcttctctaaagtga

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