Dipodomys spectabilis (banner-tailed kangaroo rat): 122116960
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Entry
122116960 CDS
T07891
Symbol
Tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122116960 (Tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dsp01007
]
122116960 (Tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsp03016
]
122116960 (Tars1)
Enzymes [BR:
dsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
122116960 (Tars1)
Amino acid related enzymes [BR:
dsp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122116960 (Tars1)
Transfer RNA biogenesis [BR:
dsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122116960 (Tars1)
Prokaryotic type
122116960 (Tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
122116960
NCBI-ProteinID:
XP_042546490
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MSEEKARNASGKMGGEEKRVDASEEKRKEGGKKKNKESCGDGGRAELNPWPEYINTRLEM
YNKLKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWKTTPYQVACGISQGLADNTVIA
KVNKVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIE
NGFYYDMYLEEGGVSSNDFSSLETLCKKIIKEKQAFERLEVKKETLLEMFKYNKFKCRIL
NEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKADMESLQRIYGI
SFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFI
RSEYRKRGFQEVVTPNIYNSRLWMTSGHWQHYSENMFSFEVEKELFALKPMNCPGHCLMF
DHRPRSWRELPLRVADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCL
DFLRTVYNVFGFSFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWELNPGDGAFY
GPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERM
IAILTENYGGKWPFWLSPRQVMVVPVGPTCDDYAQKVRQQFHDAKFMADIDLDPGCTLNK
KIRNAQLAQYNFILVVGEKEKSSGTVNIRTRDNKVHGERTVSETIERLQQLKQSRSKQAE
EEF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggaaaaggcccgcaacgcatcggggaagatgggaggcgaggagaagcgggta
gatgccagtgaagagaagcgaaaggaaggaggcaagaaaaagaacaaggaatcatgtgga
gatggaggccgagcagagttgaatccttggcctgaatatattaacacacgtctcgagatg
tataataaactgaaagcagagcatgattccattcttgccgaaaaggcagaaaaagatagc
aagcctatcaaggtcactctgcctgatggtaaacaggtcgatgcagaatcctggaaaact
actccataccaagttgcttgtggaattagtcaaggtctggcggacaacactgttattgct
aaagtgaacaaagttgtttgggacctagaccgccctctggaggaagactgtactttggag
cttctcaaatttgaggatgaggaagctcaagcagtgtattggcactcaagtgctcacata
atgggtgaagccatggaaagagtttatggtggatgtttatgttatggcccgccaatagaa
aatggattctattatgacatgtacctcgaggaagggggtgtgtccagcaatgatttctct
tctttggagactttatgtaagaaaataataaaagagaaacaagcttttgaaagattggaa
gttaagaaagaaactctactggaaatgtttaagtacaacaagttcaaatgccgcatattg
aatgaaaaagtaaatactccaaccacaaccgtctacaggtgtggccccttgatagatctc
tgtcgaggtcctcatgttagacacactggcaaaattaagactttaaaaatacacaagaat
tcttctacatactgggaaggcaaagctgatatggagagtctccagagaatttacggcatt
tcattccctgatcctaaaatgttgaaagagtgggagaaattccaagaggaagctaaaaac
cgagatcacaggaaaattgggagggaccaagaactatatttcttccatgaactcagccct
ggaagttgcttcttcctgccaaagggagcctacatttataatacacttatggaatttatc
aggagtgaataccggaaaagaggattccaggaggtggtcaccccaaacatctataacagc
cgcctctggatgacctcaggacactggcagcactacagcgagaacatgttctcttttgag
gtggagaaggagctgtttgctcttaagcccatgaactgcccaggacattgcctgatgttt
gatcatcggccacgatcctggcgtgagttgcctctgcgagtagctgattttggggtcctt
cataggaatgagctgtcaggagcactcacaggactcacccgggtacgaagattccagcag
gacgatgcacacatattctgtgccatggaacagattgaggatgaaataaaaggttgcttg
gatttcctacgtacagtatacaatgtgtttggattttccttcaaactgaacctttccact
cgcccagaaaaattccttggagatattgaagtatggaatcaagctgagaaacaacttgaa
aacagtttgaatgaatttggtgaaaagtgggagttaaatcctggtgatggtgctttctat
ggcccaaagattgacatacagataaaggatgcgattggacgctatcaccagtgtgcaacc
atccaactggattttcagttgcctattcgatttaatcttacttatgtaagccatgatggt
gatgataagaaaaggccagtgattgttcaccgagccatcttggggtctgtggaaagaatg
attgctatccttactgaaaactatgggggaaaatggcctttttggctgtctcctcgtcag
gtaatggtagttccagtgggaccaacgtgtgatgactatgcccaaaaggtaaggcaacaa
ttccacgatgctaaattcatggcagacattgatctggacccaggctgtacattgaataag
aagatcagaaatgcacagttagcacagtataacttcatcctggttgttggtgaaaaagag
aaaagcagtggcacagttaatatccgcacaagggacaataaggtccacggggagcgcact
gtttctgaaaccatcgagcggctacagcagctgaagcagtcccgaagcaagcaggctgaa
gaagaattttaa
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