KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122117314
Entry
122117314         CDS       T07891                                 
Symbol
Cdk7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03022  Basal transcription factors
dsp03420  Nucleotide excision repair
dsp04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    122117314 (Cdk7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    122117314 (Cdk7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    122117314 (Cdk7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:dsp01001]
    122117314 (Cdk7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsp03021]
    122117314 (Cdk7)
   03019 Messenger RNA biogenesis [BR:dsp03019]
    122117314 (Cdk7)
   03400 DNA repair and recombination proteins [BR:dsp03400]
    122117314 (Cdk7)
Enzymes [BR:dsp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     122117314 (Cdk7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     122117314 (Cdk7)
Protein kinases [BR:dsp01001]
 Serine/threonine kinases: CMGC group
  CDK family
   122117314 (Cdk7)
Transcription machinery [BR:dsp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     122117314 (Cdk7)
Messenger RNA biogenesis [BR:dsp03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     122117314 (Cdk7)
DNA repair and recombination proteins [BR:dsp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     122117314 (Cdk7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Kinase-like ABC1 Seadorna_VP7 Haspin_kinase APH Pkinase_fungal
Other DBs
NCBI-GeneID: 122117314
NCBI-ProteinID: XP_042546980
LinkDB
Position
Unknown
AA seq 346 aa
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTSRIVAIKKIKLGHRSEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYVLM
TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM
CSLPDYVTFKSFPGIPLQHIFIAAGDDLLELIQGLFLFNPCTRITASQALKTKYFSNRPG
PTPGCQLPRPNCPVETLKEQSNPAMATKRKRTEGLEQGGLPKKLIF
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggctctggacgtgaagtctcgagcaaagcgctatgagaaactggacttcctcggggag
gggcagttcgccacagtatataaagccagagataagaacaccagccggatcgtcgccatt
aagaaaatcaaacttggacatagatcagaagctaaagatggtataaacagaacagcttta
agagagataaaattattacaggagctaagtcatccaaatataattggtctgcttgatgct
tttggacataaatctaatattagccttgtctttgactttatggaaactgatttagaggtt
ataataaaggataatagtcttgtgctgacaccttctcacattaaagcatatgtgttgatg
actcttcaagggttagaatatttacatcagcattggattctacatagggatctaaaacca
aacaatttgttgctagatgaaaacggagtgctaaaactggcagattttggcctggccaaa
tcatttgggagccctaatagagcatatacacatcaggttgtaaccagatggtatcgggcc
cctgagttgctatttggagctaggatgtatggtgtgggtgtggatatgtgggctgttggc
tgcatattagcagaattgcttctaagggtaccttttctgccaggagactcagatcttgat
cagctaacaagaatatttgaaactttgggcacacctactgaggagcagtggcctgacatg
tgcagtcttcctgattacgtgacatttaagagtttccctgggatcccattacaacacatc
ttcattgctgcaggagatgacttgcttgaactaatacaaggcttattcttattcaatcct
tgcactcgaattacagcctcacaggcattgaagacgaagtacttcagtaaccggccaggt
ccaacccctggttgtcagctgccaagaccaaactgtccagtggagacattaaaggagcag
tccaatccagccatggcaacaaaacggaaacgaacagagggcttagagcaaggaggattg
cctaagaagctgattttttag

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