Dipodomys spectabilis (banner-tailed kangaroo rat): 122117361
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Entry
122117361 CDS
T07891
Symbol
Ocln
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03272
Virion - Hepatitis viruses
dsp04514
Cell adhesion molecules
dsp04530
Tight junction
dsp04670
Leukocyte transendothelial migration
dsp05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
122117361 (Ocln)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122117361 (Ocln)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122117361 (Ocln)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
122117361 (Ocln)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
122117361 (Ocln)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dsp01009
]
122117361 (Ocln)
Protein phosphatases and associated proteins [BR:
dsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122117361 (Ocln)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Cation_ATPase_C
UPF0182
Laminin_II
Cytochrom_B558a
FapA
APG6_N
DUF4164
DivIC
TMF_TATA_bd
Swi5
PUMA_CC
DUF948
Motif
Other DBs
NCBI-GeneID:
122117361
NCBI-ProteinID:
XP_042547040
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MSTRPFESPPPYRPDEFKPNHYAPSNDIYGGEMHVRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLIIVMCIAIFACVASTLAWDRGYGSGLLGGGLGYPYGGSGFGSYGNVYGY
GYGYGYGGGYTDPRAAKGFLLAMAAFCFIASLVIFVTSVIRSDMSRTRRYYLTVIIISAI
LGIMVFIATIVYIMGVNPTAQASGSMYGQQIYALCNQFYAPAATGLYVDQYLYHYCVVDP
QEAIAIVLGFMIIVAFALIIFFAVKTRRKMDRYDKSNILWDKEHIYDEQAPNVEEWVKNV
SAGTQDMPPPPSDYVDGVDSAMAYSSNGKVNGGKRLYPESSYKSTPLVPEVAQELPLTSP
MDDFRQPRYSSSGNLETPSKRALTKGRAGMSKRTEPDHYETDYTTGGESCDELEEDWIRE
YPPITSDQQRQLYKRSFDTGLHEYKSLQAELDEVNKELSRLDKELDDYREESEDYMAAAD
EYNRLKQVKRSADYKSKRNYCKQLKSKLSHIKKMVGDYDRRKT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaggccttttgaaagtcctcctccttatagacccgatgaattcaaaccaaat
cattatgcaccgagtaatgacatatatggtggagaaatgcacgttcgaccaatgctttct
caaccagcatactctttttacccagaagatgaaatccttcatttctacaagtggacatct
cctccaggagtgattcggattctgtctatgctcattattgtcatgtgcattgccatattt
gcatgtgtggcctctacacttgcctgggacagaggctatggatctggccttctaggtggt
ggtcttggctacccttatggaggaagtggctttggtagctatggaaatgtctatggttat
ggctatggttatggctatggaggaggatatacagatcccagagctgcaaagggcttcctg
ttggccatggctgccttttgtttcattgcctcattggtgatatttgttaccagcgtgata
agatctgatatgtctagaacaagaagatattacttaaccgtgataataataagtgctatc
ctaggcatcatggtatttattgcaacaattgtctatataatgggagtcaacccaactgcc
caggcctctggatctatgtatggtcaacagatatatgcactctgcaaccagttttatgca
cctgcagccactggactctacgtggatcagtatttgtatcactactgtgtggtggatccc
caggaggctattgccattgtactgggcttcatgattattgtggcttttgctttaatcatt
ttttttgctgtgaaaacacgaagaaagatggaccgctatgacaagtccaatattttgtgg
gacaaggagcacatttatgatgaacaggcccccaatgtggaagagtgggttaaaaatgta
tctgcaggcacacaagacatgcccccaccgccatctgactacgtggatggagttgatagt
gcaatggcgtattcctccaatggcaaagtgaatggtggcaagcggttatatccagagtct
tcctataagtcaacgccactggtgcctgaagtggctcaggaacttcccctgacttcaccc
atggatgacttcaggcagccacgttacagcagcagtggtaacttagaaacaccttcaaaa
agggccctcacaaagggaagagcaggaatgtcaaagagaacagagccagaccactatgag
acagactacacgacgggcggcgagtcctgcgatgagctggaggaagactggatcagggaa
tatccacctatcacttcagatcaacaaagacaactctacaagagaagttttgacactggc
ctgcatgaatacaagagtttacaagcagaacttgatgaggtcaataaggaactctctcga
cttgataaagaattagatgactatagagaagagagtgaagactacatggctgctgctgat
gaatacaatagattgaagcaagtaaaaagatctgcagattacaaaagtaagagaaactac
tgcaaacaattgaagagcaaattgtcacatatcaagaaaatggttggagattatgacaga
cggaaaacatag
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