Dipodomys spectabilis (banner-tailed kangaroo rat): 122117364
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Entry
122117364 CDS
T07891
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dsp00535
]
122117364
04091 Lectins [BR:
dsp04091
]
122117364
Proteoglycans [BR:
dsp00535
]
Cell surface proteoglycans
Others
122117364
Lectins [BR:
dsp04091
]
C-Type lectins
Others
122117364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
122117364
NCBI-ProteinID:
XP_042547044
LinkDB
All DBs
Position
Unknown
AA seq
2391 aa
AA seq
DB search
MGRLRARGLVLLVACLGLCGARGAPEASFYGESYVELHIVEVSSELSLQLKFQTSKPRGL
LFLAAGKNDYCIIEVVSGTVQVRVNWDTGEQALLSEQRLRVDNLAWHLVELYCVQDNIFL
VIDKYYETTGQIVGGIHNFNFHHGVYVGGRHGGLHVPYLDGKIPNFRGCMQDVMLNQREI
LMSLRSYPGFKKIHEVSLGCSDEFFAGEDEAINFFSSRSYVAFPEWKVHGEGLLGFALRT
GIQQALLLFQSGREESFVALEIHEGRLKAHVGRSKNKSQLSSHSLVSDNKWHVIQLKFTG
RYLHLMVDKERVRALLASQSVPFVSDGPLFVGGLLDQMWEQVKRLELASVKSARRIISLK
GCLRSLEANSEKRALRDALVSKDISTGCKAEAVNNANLSWTTATSLLPSELSHSTSVPRA
IKPLLPQKSSYVLILNNLEVQEGGRALLEEKHMMMNVKLNLSINYSQILFKIEDMPTHGL
LQLDVSPQQEMEKVFTMLDLWQGKVWYIHDGSEGPTDYFTFFIYSSTKQEIPLYQQDCVP
HVFNIIVIPVNDPPHLQLPEGNLFLLFENSKKQLTPNIIQVSDPDTDSLSLSFSVLGNFN
AEAGYLENANDPGEIIHGFTYLDLKNGRVFYVHRGHQNARIVLRASDGELVSNIGVLRVM
AVPWDFEVAHRTGVAVLQGGTVLITQGNLSVEVNGEQHEMETRYIITHQPQFGQIEYQGS
NGEWKQVNTFSQHSIDQSQVRYHSTFKDLQQENITDHFKFKVHVEGKMSKELMFPVTIQW
LKFTLLKNVPLEIRNTQKQVLNADHLQAATEGVDVAERELHFKLLTPPKKGNLLLGREVL
KRNSIFSQQNITDSKISYEPQERPREDSQDSFRFLILAEHIESKEYTFEINFKANKSHIT
LTNKKLFVKEGERKLITKSELFAQTWDNQSFQYQVTQNPQHGRLTLMNFLESLESLDNIT
TFTDQDILGGRLMYIHDDSETRCDEFFLVASAERPGQEGVAGDLDPEPLSTEIKVRISVE
LKNDERPVRVVDKVFHVVRGSQRLLTLGDLCYHDPDVDFDDGQLLYIRRGIPNGDLVRAS
HPMQKLYQFRQEDLQEGRVLFKHQGADSARFVLFVTDGVHYTPSLLEVSVSEPYVRVASN
TGLLVQRGKVSYITTANLSVTTNQDVRTDLEVEFHVVGPPKHGRVLVNDSVSYLFSQRDL
KQRCVMYKHDGGGNVDIFNLSVRVKDIDLEVGIHVSLEDHQQLAQILHSKTFVVEEGKSI
KLSFQAGNKDNLPSELVFIVRTPPMFGYLQKSTQEGNDMGTDAKFLLSFTQQDMDDGIIL
YVQTDPGQQQDHIFLDVTAGPHVLSEVEILLDIIPKWIPLEVQNFTVLEGGSRALLKDYL
KIPGKYFETVDCEFVLLEPPRHGNVESSNFPREKLMKFTRKQVEKELIYYVHDDSEELLD
NFTIFANSSALRKQSIPQTIFVTVESVNDEAPVITANKVLQVWVNSVTEMTRGDLCAEDE
DSSPQDLVYWVTPPSNGHLALKFLPSQSIQNFTQAQINEGQLVFVHAGAMSGGFNFQVTD
GLNLAPRQIFSITARALIISLEINRGLSIFPGSTKPLSSRDLKAVTNDESAGNRTVTFTV
VSSPSLGRLLRMNADNSTEDVSIFTQYLVNEGLILYQHMAHENTGWTVEDSFTFTMSSPP
AVLGPEEFHITISYEINEPGWQSHLFANTGATVKEGDKVLIDQSKLDASNLLLQLPELQR
SSYEIWYQVTSLPYHGTIMVGERNITKGKPNFSQYIINEFGILYLHDDSESLTDNFTFAV
WPNQKSKSITKPEGNCLEEMFKITIFPVNDQAPELKTKGLRLEVLQGSRLVVGPEILKVE
DLDSPSNEIRYMIIHNPNNGFLAMADHLDVPVHHFTQADIDNSQVWFIQDGRPCSGVFYF
SVTDGKHRPLYKLFHLDVIPISITLVNLTDLLLPQGQTTVPITSAHISAVTNGNSSHIIY
RMTWPLQHGQLLIENQVVTNFGQEDLDLGRLFYHMTNLTASEDQLHFSLFTSESNLTGQT
LGIRVQPLLWVTSNLKIVNRIAHQLRRQDLSATELANLTNSDPTFEVTEPPVHGRLMRRV
VHSNMAEDATLFTQKDIDQGLLVLESCANLTGTDMLNDSFIFVLRADSVQPAIGYLPFTI
VPPDPSLLQSMTTDVPLLLTGDNLVTSVFSEKQPVVSSEAMTQIEPLGNLTQTRWQGAEP
WGQHNGKEPSVNDKVSPTRIIWLPAATKINPGASTQPRESSYPPMVVIPLTAAFLLLIVT
VVALCVWLLGRKEETAKPLLEPQLNLEPTTPSCRPERSVSIPTVIVTPLLRSPSSPPASL
FSVPQCEQMAYPAAEPMEKCATWESWVNLDPDMAKLCRQTNPTLKHNQYWV
NT seq
7176 nt
NT seq
+upstream
nt +downstream
nt
atggggcggctccgggcccgcggcctggtcctgctcgtcgcctgcctggggctctgcggg
gcgcgcggggcgcccgaagcatctttttatggtgagagctacgtggagctccacatcgta
gaagtttcctctgagctatctcttcaattaaagtttcaaaccagcaagccacgggggtta
cttttccttgcagctgggaaaaatgactattgcataatagaagttgtatcaggaactgta
caggtgagagtgaattgggacacaggtgaacaagcactcctttctgagcaaagacttcgt
gtggacaacttggcttggcatttggtggaattgtactgtgttcaggataatattttcttg
gttattgacaaatattatgagacaactggccaaatagttggtgggatacataatttcaac
tttcaccatggagtctatgttggaggccgccatgggggactccatgtcccttacctagat
ggaaagatccccaacttccgtggatgtatgcaggatgtgatgttgaaccagagggagatt
ctgatgtcccttagatcgtaccctggttttaagaagatccacgaggtttctctgggatgc
agcgatgagttttttgctggggaggatgaggccatcaatttctttagctctagatcctat
gtcgcctttccagaatggaaggtacatggagaagggctattaggatttgctttgcgaact
ggaattcagcaagccttacttttatttcagtcaggtagagaagaaagtttcgttgccttg
gaaatacatgaaggtcggttgaaagctcatgtaggaaggagtaaaaataaatctcagctt
tcttctcatagcttagttagtgacaacaagtggcatgttattcaactcaaattcacgggg
aggtatctacaccttatggtagataaagaaagagtgagggcgctgctggcttcacaaagc
gtaccatttgtatctgatggccctctgtttgtgggaggtctccttgaccaaatgtgggag
caggtgaagaggttagagctggcctctgtgaagtctgctcgaagaataatctctttgaaa
gggtgcttacgaagcctggaagccaattcagaaaagagagcactaagggatgctcttgtt
tccaaagacatttctactggatgcaaagcggaggctgtcaacaatgcaaatctttcttgg
actacagcaacaagcctgcttccatcagaattatcccattccacttcagtcccccgagcc
atcaagcctttacttccacagaaaagtagctacgttttgattttgaataacttggaggtc
caagaaggtggacgagccttactagaagaaaagcatatgatgatgaatgtgaaacttaat
ttgagtatcaattattctcaaatactatttaaaatagaggacatgcctactcatgggctt
cttcaattagatgtttcacctcagcaagaaatggaaaaagttttcactatgttagatttg
tggcaagggaaagtgtggtacatacatgatggttcagaaggtcctacagattatttcaca
ttttttatctattccagcaccaagcaggaaataccattatatcagcaggactgtgttcca
cacgtgtttaacattattgtcattccagtgaatgaccccccgcatcttcaactcccagaa
ggtaacttgtttctcctgtttgagaactctaaaaagcaactgacgccaaatataatccag
gtgtcagacccggacactgattctttgagtcttagtttctcagttcttggcaacttcaat
gcagaggctgggtatttagaaaatgccaatgatcctggggaaatcattcatggatttacc
tatttggatttaaaaaatggccgtgtgttctatgtgcacaggggtcatcaaaacgctcgg
attgttctgagagccagtgatggtgagctagttagcaatatcggagtattacgagtcatg
gctgttccatgggattttgaagtggcccacagaactggtgtggctgttctacagggtggc
actgttctgattacccagggtaatttgtctgtggaggtgaatggggagcagcatgagatg
gagactcgttacattattactcatcaacctcaatttggccagattgagtatcaggggtca
aatggagaatggaaacaagttaataccttttctcagcactccattgaccagagtcaggtc
aggtatcatagtacgttcaaagatctgcagcaagaaaacattacagatcactttaagttt
aaagttcatgtagaaggaaaaatgagcaaagagctcatgtttcctgtgactatacaatgg
ttgaagttcacacttctgaagaatgtgcctctagagatcaggaatacacagaaacaagta
ttaaatgctgatcatttgcaggctgcaacagaaggtgtggatgtagccgagagggaatta
cattttaagttgctgaccccacctaagaaaggaaacttgctacttggcagggaagttctt
aaaagaaactccatcttcagccagcaaaatattacagactctaagataagttatgaacct
caggagaggccgagagaagactcacaggacagtttcaggtttttgattcttgccgaacac
atagaatcaaaagagtatacttttgagataaatttcaaggcaaataagtcacacattact
ttaacaaacaaaaaactatttgtaaaagagggagaaaggaaactaattacaaaatcagaa
ttgtttgctcaaacctgggacaatcagagtttccaatatcaagtcacccagaatcctcaa
catggaaggctgacattgatgaactttcttgagtctctggaaagtctggacaatattact
acattcactgatcaagacatcttgggcggacgactcatgtatattcatgatgactctgag
acacggtgtgatgaattctttctggtggcctctgccgaacgtccaggccaagagggcgtg
gctggggatcttgacccagagcccttgtctacagaaatcaaagtcagaatttctgtggag
ttgaagaatgatgagaggccagtgcgtgtagtggataaggtatttcatgttgtgcggggc
agccagcgcttactgaccctgggcgatctctgttaccatgaccctgacgtagatttcgat
gatggacagctgctgtacattcgacgaggcattcccaatggggacttggtccgagccagc
caccccatgcaaaagctctaccagttccggcaggaggacctgcaggaagggcgagtgctc
ttcaagcaccaaggggctgactctgcccgctttgtgctgtttgtgacagatggtgtccat
tacacaccatcccttcttgaggtcagtgtgtcagagccctatgtccgcgtagccagcaac
acagggctgctggtacagaggggaaaagtcagttatatcaccacagcaaacctgagtgtc
accacaaatcaagatgtgcgaacagatctggaggtagagtttcatgtcgtggggcctcca
aagcatggcagagtcctggtcaacgattctgtatcctacttgttttcccaacgtgacctg
aagcagagatgtgtgatgtataagcacgatggtggtggcaacgttgacatattcaacctg
tcagtgagagttaaagatatagacttggaagtggggatccacgtgtctttggaagatcat
cagcagctagctcagattctgcacagcaagacctttgtagttgaagaaggaaaatctatc
aaattgagctttcaggctgggaacaaagacaatcttccttcagaactagtgttcatagtc
agaactccacctatgtttggatatctccagaaatctacacaagaaggcaacgacatgggt
acagatgcaaaattccttttgagttttacccaacaggacatggatgatggcattatcctt
tatgtacagacagatcctggccaacaacaggatcacatttttctggatgtgactgctggt
ccccatgtgttaagtgaagtagaaatcctgttggacatcatccccaagtggattcccctg
gaggtacagaactttacagttctagaaggtggatccagggcacttctgaaagactacctc
aaaattcctggcaaatactttgagacagttgactgtgaatttgttctacttgaaccacca
agacatggaaatgtcgaaagttctaattttccaagagagaagttaatgaaatttaccagg
aaacaggtggaaaaagaattgatttattatgttcatgatgatagtgaggagcttctggac
aatttcaccatctttgcaaatagctcagcacttaggaaacagagtatacctcaaactatc
tttgtgactgttgaatctgtaaatgatgaagctccagtaataacagccaataaagtcctc
caggtgtgggtgaattcagtcacagagatgaccagaggtgacctgtgtgcagaagatgag
gactcctccccgcaggacctggtctactgggttactccacccagtaatgggcatctggct
ctcaagttccttcccagtcaaagcatccagaacttcacccaggctcaaatcaatgagggc
caactagtgtttgtacatgccggagcaatgtcaggaggttttaattttcaggttactgat
ggattgaaccttgcacctcgacaaatctttagcatcaccgctcgagctctgatcattagc
ttagaaataaacagaggtttaagcatctttccaggatctacaaagcctctttcatctcgt
gacctgaaagctgtgaccaatgacgaaagtgcaggaaacagaactgtaactttcacagtc
gtaagttcccctagtcttgggaggttgctgagaatgaacgctgacaatagcactgaagat
gtttccatttttacccaatatctggtcaatgaagggctaatattatatcagcacatggct
catgagaacacaggttggactgtggaagattcattcacattcacaatgtcctctccacca
gcagttctgggtcctgaagagttccatattaccatttcatatgaaattaatgagcctggt
tggcagagccatctgtttgcaaatacaggagctactgtcaaggagggagacaaagttctc
attgaccagtctaagttagatgcttccaacctcttactccaattacctgaacttcagcgc
tcttcctatgaaatctggtaccaagttacatcccttccttaccacgggaccattatggtt
ggagaaagaaacatcaccaaaggaaaacccaatttctcccagtatataattaatgaattt
gggatcctataccttcatgatgactctgaatcactgactgataactttacctttgccgtt
tggccaaaccaaaaaagcaagtccatcaccaagccagagggcaactgtcttgaagagatg
tttaagatcaccatttttcctgtcaatgaccaggcaccagaattaaagacaaaagggctt
cggttggaagttctgcagggcagtaggttggttgtgggacctgaaatcctaaaagtggaa
gatctagacagtccttcaaatgaaatcaggtatatgatcatccataatcccaacaatggc
tttttggcgatggctgaccatctagatgtgcctgttcaccattttacacaagctgatatt
gataactctcaggtgtggttcatacaagatggaagaccatgttctggagtgttctacttt
agtgtgactgatggaaaacaccgccctctctacaagctgttccatttggatgtcattccc
atctccatcacccttgtgaacctcacagatctacttcttccacaaggtcagacaactgtc
cctatcaccagtgctcacatatcagcagtgaccaatgggaacagctcccatataatctac
agaatgacatggccactccaacatgggcaactgctgattgaaaaccaggtggtcactaat
tttggacaggaggatttagatttgggaagactcttttaccatatgacaaatctcacagct
tcagaggaccagctacacttctcattgtttacatcagaaagcaacctgacaggacaaaca
ctgggcattagagtgcagcctctactgtgggttacatcaaacctgaaaattgtcaacaga
atagcccatcagctgaggagacaagacctcagtgcaactgagcttgctaatctgactaac
agtgatcctacatttgaagtgacagaaccccctgtgcatggaagacttatgcgaagagtg
gttcacagcaatatggcagaagatgccactctgttcactcagaaagacattgaccagggg
ctgttggtgctagaatcatgtgctaatctaacaggcactgatatgctaaatgactctttt
attttcgtgctcagggccgactctgtacaaccagcaataggttatctccccttcaccatt
gtgccacctgatccctcacttttgcaaagcatgacgacagatgttcctttattgctcact
ggagataaccttgtaacctcagttttctctgagaaacagcctgtggtttcttcagaagcc
atgacacagatagaacctctggggaatctgacccagaccagatggcagggagcagaaccc
tgggggcagcacaatggcaaagagccaagtgtgaatgacaaggtctctcccaccaggatc
atttggttaccagctgccaccaaaatcaaccctggggcatccactcagcccagggagagc
agttaccctccaatggttgtcatacccctgactgctgcattcctcctgctaatagttact
gtagtggccttgtgtgtctggttgctgggccggaaagaagagacggcaaaacccctactt
gaaccccagctcaacctagagcccacaacccctagctgcagaccagaaaggagtgtaagc
attcccactgtcatagtgacgccccttctaagaagtcccagcagtcccccagccagtctg
ttcagtgtcccacaatgtgagcaaatggcttacccagcagctgagccaatggaaaaatgt
gctacttgggagtcatgggtgaacctggatccggatatggccaaactctgccgacaaacc
aacccgacactgaaacacaaccagtattgggtgtag
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integrated database retrieval system
