Dipodomys spectabilis (banner-tailed kangaroo rat): 122117439
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Entry
122117439 CDS
T07891
Symbol
Vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dsp01009
]
122117439 (Vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122117439 (Vps54)
Protein phosphatases and associated proteins [BR:
dsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122117439 (Vps54)
Membrane trafficking [BR:
dsp04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
122117439 (Vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
DCP1
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
122117439
NCBI-ProteinID:
XP_042547100
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MASSHSSSPVPQGSSDVFFKKEVDSAKHIRHVQSLPDVCPKEPTGDSNSLCVAPSLVTDQ
HRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTAYQ
QEISQREKIHERCKNICPPKDTFDRSLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFNS
VLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHEL
QDYLKKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQP
TVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFSTY
SHNDLNRPLEDDCQVLEEERLVSLVFGLLKQRKLNFLEIYGEEMIIAAKNIIKQCVINKV
SQIEDIDTDAVVKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVLD
KNQRARELEEISQQKNAAKDNSLDTEVAYLTHEGMFISDAFSEGELAPSVVDTTSQRNVS
PNSEPCSSDSVSEPECTTDSSSSKEQTSSSTPGGVDIMTSEDMKLTDLELGKLANNIQEL
LYSASDTCHDRAVKFLISRAKDGFLEKLNSTEFITLSRLMETFIADTEQVCGRKSTSLLG
ALQSQANKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDAISDGKISLPEKKPGA
TEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYFNS
RSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQYNMLRH
FDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMTKMHEAIF
DLLPEEQTQMLFLRINTSYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKGL
KDLDLNMAEIWEQKR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagtgatgtcttctttaaa
aaagaggtagattcagcaaaacatattcgacatgtgcagtcactgccagatgtgtgtccc
aaggagcccacaggtgattcaaatagtttatgtgttgccccatctctagttacagatcaa
catagatggactatatatcattccaaagtaaatctcccagcagcattaaatgatcctaga
ttagcaaaaagagaatctgacttcttcacaaaaacatggggattggactttgtggacacc
gaagtcataccttcattctacctcccacagatcagcaaggaacattttacagcatatcaa
caggaaatctctcagagagagaagattcatgaaagatgcaagaatatttgtcctcctaaa
gatacctttgacaggagtcttttacatactcatgataaatccaggacagatctggagcaa
gtacctaagatttttatgaaaccagattttgccttggatgattccttaacttttaattca
gttttaccgtggtctcattttaatactgctggtggaaaaggaaatcgtgatgcagcttcc
tcaaagttacttcaagaaaagctgagccattacctggacattgtggaagtaaacattgct
catcagatctctctacgttcagaagcattttttcatgcaatgacctctcaacatgaattg
caggactacctcaagaaaacttcccaggctgtaaaaatgcttcgtgataaaattgcacag
attgataaagtaatgtgtgaaggatcactacatattttaagactggcacttaccagaaat
aattgtgttaaagtatacaataaactgaagttaatggccactgtacaccaaactcagcct
acagtgcaggtgttattatctacttctgaatttgttggcgcattggacttaatagcaaca
acgcaagaggttctacagcaggaattacagggcattcatagcttccggcatttgggatca
caactttgtgaattagaaaagttgatagataaaatgatgattgcagaattttctacttat
tctcacaatgatttaaacaggccactggaagatgactgtcaagttttagaagaggaaaga
ctagtatctcttgtatttggacttttaaagcaaagaaaactgaattttttagaaatctat
ggtgaagaaatgattattgcagcaaagaatatcattaaacagtgtgtgattaataaagtt
tcacaaatagaagatatagacacagatgctgttgtaaagcttgcagatcagatgagaatg
ttgaatttcccccagtggtttgacttattaaaggatattttctctaagtttacaattttc
ctacagagagttaaggccacattgaatataattcacagtgttgttctctcagttcttgac
aaaaaccaaagggctagagaactggaggagatttcacagcagaagaatgctgcaaaagac
aattcattggacacagaggtggcttatttaacccatgaaggcatgtttataagtgatgca
ttcagtgagggtgaattagcaccttcagtagttgatactacctctcaaagaaacgtgtct
ccaaatagtgagccctgcagcagcgattcagtatctgaacctgaatgtactactgattct
tcatccagcaaagagcagacatcatcatctactccaggaggtgtggatattatgaccagt
gaagacatgaaattaactgacttagagctaggaaagctggcaaataatatccaggagtta
ttgtacagtgcctcagatacatgccacgatcgagctgtcaaatttcttatatcaagagcg
aaggatggttttcttgagaaactaaattccacggaattcataacactctctagattaatg
gaaacattcattgcagacactgaacaggtctgtggaagaaaaagcacatccttacttgga
gcacttcagagccaagctaataaatttgtaaataggtttcatgaagaaagaaaaaccaaa
ctcagcctcctcttagacaatgagcgctggaaacaagctgatgttcctgcagaatttcaa
gatcttgttgatgctatatcagatggaaagatttctttacctgaaaaaaaaccaggagct
acagaagaaaggaaaccagctgaagttctcattgtagagggacaacagtatgctgttgtt
ggaactgtattgctgttaataagaattatccttgaatattgccaatgtgtggataacata
ccatctgttactactgacatgcttacgcgtctgtcagatttactaaagtatttcaactca
agaagttgccagttagttcttggagctggtgcactgcaagttgttggactaaaaaccata
actacaaaaaatttggctctttcttcgaggtgtttgcagttaatcgtgcactacattcct
gtgatccgggctcattttgaagctcgactaccacctaagcaatataacatgcttaggcat
tttgatcacatcactaaggattaccatgaccacatagctgaaatatcagccaagcttgta
gcgataatggatagcttatttgacaagctcttatcaaagtatgaggtgaaagctcctgtt
ccttctgcctgtttcaggaatatttgtaagcaaatgacaaaaatgcatgaagctatattt
gatcttcttcccgaagaacaaacacagatgttatttttaagaattaatacaagttacaaa
ctccacttgaaaaagcagttatctcacttaaatgtgataaatgatggaggacctcagaat
gggttggtaacagcagatgtagctttttacactggaaatcttcaagccttaaaaggcctt
aaagatttggacctaaatatggctgagatctgggaacagaagagatga
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