Dipodomys spectabilis (banner-tailed kangaroo rat): 122117440
Help
Entry
122117440 CDS
T07891
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04517
IgSF CAM signaling
dsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122117440 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122117440 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dsp04812
]
122117440 (Sptbn1)
Cytoskeleton proteins [BR:
dsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122117440 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
122117440 (Sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
122117440
NCBI-ProteinID:
XP_042547102
LinkDB
All DBs
Position
Unknown
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSSHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAESPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLFQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
RESASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEEAESQQQWDTSKGEQVSQNGLPAEQGSPRMTDTVDTSEMVNGAAEQRTS
SKESSPIPSPTSDRKAKTALPAQSAATLPARTQETPAAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAVCEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKHDLSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSLFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacaactacagtagccacagattacgacaacattgagatccaacagcagtacagcgat
gtgaacaaccgctgggatgtggatgactgggacaatgagaatagctctgcacggctcttc
gaacggtcccgcatcaaggctctggcagatgagcgtgaagccgtgcagaagaagaccttc
acgaaatgggtcaactctcaccttgcccgagtgtcctgtcggatcacagatctgtacact
gaccttcgagatggacggatgcttatcaagctgctggaagtactctccggagagaggctg
cctaaacccaccaagggaagaatgcgcatccactgtctggagaatgtggacaaggccctc
cagttcctgaaggaacagagagtccatcttgagaacatgggttcccacgacattgtggat
gggaaccaccggctgacccttggcctcatttggaccatcatcttacgcttccagatccaa
gatatcagtgtagaaactgaagataataaagagaagaagtctgccaaggatgcattgctg
ttgtggtgccagatgaagacagctggataccccaatgtcaacattcacaattttactact
agctggagagatggtatggcgtttaatgcactaatacacaagcaccggcctgacctgata
gattttgataaactgaagaaatccaatgcacactacaatcttcagaatgcatttaacctg
gcagagcagcacctcggcctcactaaactgttggatcctgaagatatcagtgtggatcac
cctgatgagaagtctattatcacttacgtggtgacttactaccactacttctctaagatg
aaggccttggctgttgagggaaaacgaattggaaaggtgcttgacaatgccattgaaaca
gaaaaaatgattgaaaagtatgaatcacttgcctctgaccttttggaatggattgaacaa
accatcattattctgaacaatcgcaaatttgccaattctctggtcggggttcaacagcag
cttcaggcattcaacacttaccgcactgtggagaaaccacccaaatttactgaaaaggga
aacttggaagtgctactgttcactattcagagcaagatgagggccaacaatcagaaggtc
tacatgcccagagagggcaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacatgagcgagaactggccctgcgtaatgagctcataagacaagagaaactg
gaacagctcgcccgcagattcgatcgcaaggcagctatgagggagacttggctaagcgaa
aaccagcgcctggtatcccaggacaactttggatttgaccttcccgcagttgaagccgcc
acaaaaaagcacgaggccattgagacagacattgccgcatacgaggaacgtgtgcaggct
gtggtggccgtggccagggagcttgaggcagagaactaccatgacatcaagcgcatcacc
gcgaggaaggacaatgtcatccggctctgggagtacctgctggaactgctcagagctagg
agacagcgtctcgagatgaacttaggcttgcaaaaaatattccaggaaatgctctacatt
atggactggatggatgaaatgaaggtgctattattatctcaagactatggcaaacacttg
cttggtgtggaggacctgttacagaagcatgctctcgttgaagcggacattggaatccag
gcagagcgtgttaggggtgtcaacgcctctgcccagaaatttgcaacagatggggaaggc
tacaagccctgtgaccctcaagtgatccgagaccgggtggctcacatggagttctgctac
caagagctttgccagctagcagctgagcgccgggcccgcctggaagagtctcgccgtctc
tggaagttcttctgggagatggcagaagaggaaggctggatccgagagaaggagaagatc
ctgtcctctgatgattatgggaaagacctgaccagtgtcatgcgcctgctcagcaagcac
cgggcatttgaggacgagatgagcggccgcagcagccacttcgagcaggctatcaaagaa
ggtgaagatatgattgcggaggagcactttggatcagaaaagatccgtgagaggatcatt
tacatccgggagcaatgggccaacctggaacagctctcagctattcggaagaagcggctg
gaggaggcctcacttctacatcagttccaggcagatgccgatgacattgatgcctggatg
ctggacatcctcaagatagtctccagcaacgatgtgggccacgacgagtactccacacag
tctctggtgaaaaaacacaaggatgtggctgaagagatcaccaattacaggcccacaatc
gacacgctgcatgagcaagccagcgccctcccccaggctcacgcagagtctccagatgtg
aggggacggctggcgggcattgaagagcgctacaaggaagtggcagagctcacacggctg
aggaaacaggcgctgcaggacaccctggccctgtacaagatgttcagcgaggctgatgcc
tgtgagctctggattgatgagaaggagcagtggctcaataatatgcagatcccagagaaa
ctggaggacctagaagtcatccagcacaggtttgagagcctcgaaccagaaatgaacaac
caggcttcccgggttgctgtagtaaaccagattgcacgtcagctgatgcacagtggccat
cccagtgagaaggaaatcaaagcccaacaggacaaactcaatacaaggtggagtcagttc
agagaactggttgacaggaagaaggatgctcttctgtctgccctgagcatccaaaactat
catcttgagtgcaatgaaaccaaatcttggattcgagaaaaaaccaaagttattgaatct
acccaggacctaggcaacgacctggctggagtcatggccctacagcggaagctgactggc
atggagcgagacttggttgccatcgaggcaaagctgagtgacctgcagaaggaggcagag
aagctggagtctgagcaccccgaccaggctcaggcaatcctgtctcggctggccgagatc
agtgacgtgtgggaggagatgaagaccaccctgaagaaccgagaggcctccctgggagaa
gccagcaagctgcagcagttcctacgggacttggatgacttccagtcgtggctctccagg
acccagacagccatcgcctctgaggacatgcccaacaccctgaccgaggcagagaagctt
ctcacacagcatgaaaatatcaaaaatgagatcgacaactatgaggaggactaccagaag
atgagggacatgggtgagatggtcacccagggacagactgatgcccagtacatgtttctg
cgccagcggctacaggccttggacactggatggaatgaactccacaaaatgtgggagaac
aggcaaaatctcctcttccagtcccacgcctaccagcagttcctgagggacacaaagcaa
gccgaagcctttcttaacaaccaggagtatgttttggctcatactgaaatgcccactacc
ctggaaggagctgaagccgctattaaaaagcaagaggacttcatgaccaccatggatgcc
aacgaggagaagatcaatgctgttgtggagacaggccggaggttggtgagcgatggaaac
atcaattccgatcgcatccaagaaaaagtggactccattgatgacagacacaggaagaat
cgtgagtcagccagtgaacttctgatgagattgaaggacaacagggatcttcagaagttc
ctgcaagattgtcaagagctttctctctggatcaatgaaaagatgcttacagcccaggac
atgtcttacgatgaagccagaaatctgcacagtaaatggttgaagcaccaagcatttatg
gcagaacttgcatctaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagcctgagacggaagctgtggtgaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccacccagaccaaggcccagcggctctttgatgcaaac
aaggctgaactttttacccagagctgcgcagatctggataaatggctccatggcctggag
agtcagattcagtctgacgattatggcaaagaccttactagcgtcaacatcctgctgaaa
aagcaacagatgctggagaaccagatggaagtacggaagaaggaaattgaggagcttcag
agccaggcccaagctctgagtcaggaagggaagagcaccgatgaggtagacagcaagcgc
ctcactgtgcagaccaaattcatggagctgctcgaacccttgaatgaaaggaagcataat
ctgctggcctccaaagagatccatcagttcaacagagatgtggaggacgagatcttgtgg
gttggtgagaggatgcctttggcaacttccacagatcacggccacaacctccagactgtt
cagctgctaataaagaaaaaccagaccctccagaaagaaatccaggggcatcagcctcgc
attgatgacatctttgagagaagccaaaatatcgtcactgacagcagcagcctcaatgcg
gaggccatcagacagaggcttgccgacctgaagcagctgtggggcctcctcatcgaggag
acggagaaacgccaccgacgccttgaggaggctcacaaggcccagcaatactactttgac
gccgctgaagccgaagcatggatgagcgagcaggagctgtacatgatgtctgaggagaag
gccaaggatgagcagagtgctgtctccatgttgaagaaacaccaaattttagaacaagcc
gtggaggactatgcagagacagtacaccagctctccaagacaagccgggcattggtggct
gacagccatcctgaaagtgagcgcattagcatgcggcagtccaaagtagataagctatat
gctggcctgaaggaccttgctgaagagaggagaggcaagctagatgagaggcacaggcta
ttccagctcaaccgggaggtggatgacctagagcagtggattgctgagagggaggtggtc
gcagggtcccatgaactggggcaggactacgagcacgtcaccatgttgcaagaacgattc
cgggaatttgctcgagacacagggaacattggacaggaacgtgtggacacggtcaatcac
atggcagatgatctcatcaactctggacactcggatgctgccaccatcgctgaatggaag
gatggccttaatgaagcctgggctgatctgctggagctcattgacacgagaacacagatt
ctggctgcctcctatgaactgcataagttttatcatgatgccaaggaaatctttgggcgt
atccaggataaacacaagaaactccctgaggagcttgggagagatcagaacaccgtggag
accttacagcgaatgcacaccacctttgagcatgacatccaagctctgggcactcaggtg
aggcagctgcaggaggatgcagctcgcctccaggcagcctatgcgggtgacaaggctgac
gacatccagaagcgtgagaacgaggtcctggaagcctggaagtccctcctggacgcctgt
gagggccgcagggtgcggctggtggacacaggggacaagttccgcttcttcagcatggtg
cgggacctcatgctttggatggaggatgtcatccggcagatagaagcccaggagaagcca
agggatgtgtcatctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgcaacgacagtttcacaacctgtattgaacttgggaaatccctgctggctagg
aagcactatgcatctgaggagatcaaagaaaagttactacagttgacggaaaagagaaaa
gaaatgattgacaagtgggaagacagatgggaatggttaagactgattttggaggtccat
cagttctcaagggacgccagtgtggccgaggcttggctgcttggacaggagccctaccta
tccagccgcgaaatcggccagagtgtggatgaggtggagaagctcatcaagcgccatgag
gcatttgaaaagtctgcagcgacctgggacgagaggttctccgccctggaaaggctaaca
acattggagttactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggcca
ccttctccagagccaagcacaaaggtttctgaggaggctgagtcccagcagcaatgggat
acttcaaaaggagagcaagtttcccagaatggtttgccggctgagcagggatcgccacgg
atgacagatacggtggacaccagcgaaatggtcaatggcgctgctgaacagaggacgagc
tccaaagagtccagtcctatcccctccccgacctctgaccgcaaggccaagactgcactc
ccagcccagagtgccgccaccctgcccgccaggacgcaggagacacccgcggcccagatg
gaaggcttcctaaaccggaagcacgagtgggaggcccacaacaagaaagcctcaagcagg
tcctggcacaatgtatattgtgtcataaataaccaagaaatgggtttctacaaagacgcc
aagaccgctgcttccggcatcccttaccacagcgaggtccctgtgagtttgaaggaagcc
gtctgtgaagtggcccttgactacaagaagaagaaacacgtgttcaagctcagactaaat
gatggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacgtggatccag
gccatctcctctgctatctcctctgacaaacatgacctgtccgccagcacccagagcaca
ccagcctcgagccgggcgcagaccttgcccaccagcgtggtcaccatcaccagcgagtcc
agtcccggcaaacgggagaaggacaaagagaaagacaaagagaagcgcttcagccttttt
ggcaaaaagaagtga
DBGET
integrated database retrieval system
