Dipodomys spectabilis (banner-tailed kangaroo rat): 122117447
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Entry
122117447 CDS
T07891
Symbol
Pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122117447 (Pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122117447 (Pnpt1)
03016 Transfer RNA biogenesis [BR:
dsp03016
]
122117447 (Pnpt1)
Enzymes [BR:
dsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
122117447 (Pnpt1)
Messenger RNA biogenesis [BR:
dsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
122117447 (Pnpt1)
Transfer RNA biogenesis [BR:
dsp03016
]
Prokaryotic type
tRNA degradation factors
122117447 (Pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
RST
KH-I_KHDC4-BBP
CUE
Motif
Other DBs
NCBI-GeneID:
122117447
NCBI-ProteinID:
XP_042547122
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MAACKQCCSRLRPLAEGPLRLPGRSRALNSLLVRTLSSSAGSRSVAVDLGNRKLELSSGK
LARFADGCAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRELG
SSDKEILTSRVIDRSIRPLFPAGYFYDTQVLCNLLAVDGINEPDVLAINGASAALSLSDI
PWNGPIGAVRIGMIDGECVVNPTRKEMSSSTLNLVVAGAPKSQIVMLEASAENILQQDFC
HAVKVGVKYTQQIIQGIQQLVKEVGVTKRTPQKLSTPSPEIVKHAHKLAMEKLYTVFTDY
EHDKISRDETVNKIRLDTEEQLKEKFPDVDPYEIIESFNIVAKEVFRSIILNEYKRCDGR
DLTSLRNISCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESSIKSDQIITAINEIKDKN
FMLHYEFPPYATNEIGKVTGVNRRELGHGALAEKALYPVIPKDFPFTIRVTSEVLESNGS
SSMASACGGSLALMDAGVPISSAVAGVAIGLVTKSNPDNGEIEDYRLLTDILGIEDYNGD
MDFKIAGTNKGITALQADIKLPGIPIKIVMEAIQQASMAKKEILQIMNKTISKPRTSRKE
NGPVVETVQVPLSKRAKFVGPGGYHLKKLQAQTGVTISQVDEETYSIFAPTPNAMHEARD
FITELCKDDQEQKLEFGAVYTATITEIRDIGVMVKLYPNMTAVLLHNSQLDQRKIKHPTA
LGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATNVVKTLNERSSIVMGESVSQSSSNS
SQ
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtgcaagcagtgctgctcacgcctccggcctctggcagaggggccccttcgt
ctgccagggcggagtcgggcactcaactccttgcttgtgcgaactctgtcgtctagcgca
gggtcccgatccgtggctgtggacttaggcaacagaaaattagaactatcctctggaaaa
ctggcaaggtttgcagatggctgtgctgtggtacagtcaggtgacactgcagtgatggtt
acagcagtcagtaaaacaaaaccttcaccttcccaattcatgcctttggtagttgactac
agacagaaggctgctgcagcaggtagaattcctacaaactaccttagaagagagcttgga
tcctctgataaagaaattcttacaagtcgagtaatagatcgttcaattagacctcttttt
ccagctggctatttttatgatacccaggtcctttgtaatttgttagcagtagatggtatt
aatgaacctgatgttctagcaattaatggagcttctgcagccctctcattatcagatatt
ccatggaatggacctattggggctgtacgaataggaatgattgatggagaatgtgttgtt
aacccaacaagaaaagaaatgtcttctagtactttaaatttagtggttgctggagcacct
aaaagtcagattgtcatgttggaagcttctgcagaaaacatcttacagcaggacttttgc
catgctgtcaaggtgggagtgaaatatacccaacaaataatccagggcatccagcagttg
gtgaaagaagttggtgttaccaagaggacacctcagaagttatctaccccttcaccagag
attgtgaagcatgctcacaaacttgccatggagaaactctatacagttttcacagattat
gaacatgataagatctccagagatgaaactgttaacaagattagattagatacagaggaa
caactaaaagaaaaatttccagatgtcgacccatatgaaataatagaatccttcaatatt
gttgcaaaggaagtttttagaagtattattttgaatgaatacaaaaggtgtgatggacga
gatttgacttcacttaggaatataagttgtgaggtagatatgtttaaaactcttcatgga
tcagcattatttcaaaggggacaaacacaggtgctttgtactgttacatttgattcacta
gaatctagtattaagtcagatcaaattataacagctataaatgaaataaaagataaaaat
ttcatgctgcactatgagtttcctccttatgcaactaatgaaattggcaaagtcactgga
gtaaatagaagagaacttggacatggtgctcttgctgagaaagctttgtatcctgttatt
cccaaagattttccttttaccataagagttacctctgaagtcctagagtcaaatggatca
tcttcaatggcatctgcatgtggtggaagtttggcattaatggatgcaggggttccaatt
tcatctgctgttgcaggtgtagcaataggattggttaccaaaagcaacccagacaatggt
gaaatagaagattatcgtttgctgacagatattctgggaattgaagattacaatggtgac
atggatttcaaaatagctggtacaaataagggaataactgcattacaggctgatattaaa
ttacctggaataccaataaaaattgtaatggaagccattcagcaagcatcaatggcaaag
aaggagatattacagataatgaacaaaactatttcaaaacctcgaacatctagaaaagaa
aatggacctgttgtagaaactgttcaagttccattatcaaaacgagccaaatttgtagga
ccaggtggatatcacttaaagaaacttcaggctcaaacaggtgtaactattagtcaggtg
gatgaagaaacatattctatatttgcaccaacacctaatgccatgcatgaagcaagagac
ttcattactgaactgtgcaaagatgatcaagagcagaaattagaatttggagcagtttat
acagccacaataactgaaatcagagacattggagtaatggtaaagctctatccaaatatg
actgcagtactgcttcataactcacaacttgatcagcgaaagattaaacaccctactgcc
ctaggattggaagttggccaagaaattcaggtgaaatactttgggcgtgatccagcagat
ggaagaatgagactttctcgtaaagtacttcagtctccagctacaaatgttgtcaaaact
ctaaatgaaagaagcagcatagtaatgggagaatctgtttcacagtcttcatctaattct
tcccagtaa
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