Dipodomys spectabilis (banner-tailed kangaroo rat): 122117449
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Entry
122117449 CDS
T07891
Symbol
Fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03460
Fanconi anemia pathway
dsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122117449 (Fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
122117449 (Fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122117449 (Fancl)
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122117449 (Fancl)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122117449 (Fancl)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122117449 (Fancl)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
122117449 (Fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-rbx1
zf-RING-like
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
122117449
NCBI-ProteinID:
XP_042547125
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MAAAAAALAEGNLLRQCPLLLPQNRAKTVYEGFISAQGRDFHLRILLPKDLKLKNARLLC
SWQLRSILSGYHQIVKQRMQHSPDLLSFMMELKMILEAALKNRQEINVLPPPPHFYTSLV
EDMETLGWDKLVYVDSCFSTIKLKSEDVSGREHLITVKLKAKHPEEPPDCFVDFPVPFSI
SWTPQSSLISIHSQFLAGLESLKAFWDVMDEIDEKTWVLEPEKPTRSATARRIVIGNNAS
INIEVDPRHPTMLPECCFLGADHVVKPLGIKLSKNMHLWDPENSLLQNLKDVLEIDFPPR
TILEKCDFTMDCGICYAYQLDGAIPDQMCNYSQCGQPFHQICLYEWLRGLPTSRQSFNIL
FGECPYCSKPITLKMSGRKP
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcgctggcggaggggaacctgttgcgccagtgcccgttgctt
ttgcctcaaaaccgggcgaaaactgtgtatgaggggttcatttcggctcagggaagagat
tttcaccttagaatattgttgcctaaagacttaaaactgaagaatgcaagattactatgt
agttggcaactgagaagcatacttagtggataccatcaaatagtcaagcagagaatgcag
cactcccctgatctattgagctttatgatggagttgaaaatgattttggaagctgcttta
aagaatagacaagagataaatgtgctgcctcctcctccccatttctacacaagccttgtt
gaagacatggaaactcttggttgggataaacttgtatacgtggattcttgctttagtacc
atcaagttaaaatcagaagatgtttctggtagagagcatctaatcactgtcaagttgaag
gcaaagcaccctgaggaaccaccagattgttttgtggattttcctgttccattttctatt
tcttggacaccacagagctccttaataagcattcatagtcagttcttggcaggattagaa
tcactgaaggcattctgggatgttatggatgaaatcgatgagaagacctgggtgctggag
ccagaaaaacctactcggagtgcgacagcacgcagaattgtaatagggaataatgcttcc
ataaatatagaggtagaccccagacatcctaccatgcttcctgagtgctgctttcttgga
gctgatcatgtggtaaaacccctgggaattaagctgagcaagaacatgcatttgtgggat
ccagaaaatagtctgttacaaaatttgaaagatgttttagaaattgattttccacctcgt
actattctggaaaaatgtgattttactatggattgtggaatctgttatgcttatcaactt
gatggtgctattcctgatcagatgtgcaattattcccagtgtggacagcctttccaccaa
atatgcttatatgagtggttgagaggcctccccactagtagacagagttttaacattcta
tttggagaatgtccatactgcagtaagccaattaccttgaaaatgtctgggaggaaaccc
tga
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integrated database retrieval system
