Dipodomys spectabilis (banner-tailed kangaroo rat): 122117603
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Entry
122117603 CDS
T07891
Symbol
Gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03022
Basal transcription factors
dsp03420
Nucleotide excision repair
dsp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122117603 (Gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
122117603 (Gtf2h1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
122117603 (Gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsp03021
]
122117603 (Gtf2h1)
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122117603 (Gtf2h1)
Transcription machinery [BR:
dsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122117603 (Gtf2h1)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122117603 (Gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
122117603
NCBI-ProteinID:
XP_042547250
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPGLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSTSNSKSIKENSN
AAIIKRFNHHSAMVLAAGLRKQQAQNEQNGEPSRMDGNSGDADSFQPAIKRAKLQESIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPRLTQ
VLSSNAASSTITALSPGGALMQGGAQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVMKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHSWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagttttgttgattgtaaaaaaggtgcgtcaaaagaagcag
gatggagctctatacctcatggcagaaagaattgcttgggcacctgaaggcaaagataga
tttacaatcagccatatgtatgcagatattaaatgtcagaaaatcagtccagaaggaaag
gctaaaattcagcttcagctggttctgcatgcaggagacacaactaacttccatttttcc
aatgaaagcacagcagtgaaagaacgagatgcagtgaaggaccttcttcagcagctactg
cccaaattcaagaggaaagcaaataaggaactagaagaaaaaaacagaatgctccaagaa
gatcctggtttgtttcagctttataaagaccttgttgtaagtcaagtgatcagtgctgag
gaattctgggcaaatcgtttaaatgtgaatgcaacagatagttcttccacatccaatcac
aagcaggatgtcggcatttctgcagcatttctggctgatgtccggccccaaacagatggc
tgtaatggtttgagatataatttaacttctgatattattgaatccatatttagaacctat
ccagcagtaaagatgaaatatgcagaaaatgttcctcacaacatgacagaaaaggaattt
tggacacgttttttccagtctcattattttcatagggaccggctaaatacagggtcaaag
gatctctttgcagaatgtgccaaaatagatgaaaaagggttaaaaacaatggtttcatta
ggagtaaaaaacccactactagatttgacagctttggaagacaagccattagatgagggc
tatggcatttcctcagtgccatctacttccaattctaaatccataaaggagaatagtaat
gctgcaatcatcaagaggtttaaccatcacagtgccatggttctggcagctggtctcagg
aaacaacaagcacaaaatgaacaaaatggtgaacccagccgcatggatggaaattctgga
gatgctgactcgtttcagccagcaataaaaagggcaaagttacaagagtccattgaatat
gaagacttgggaaaaaacaattccattaaaacaattgcactaaacctcaagaagtcagat
aggtattatcatggtccaactccaatccagtcgctacagtatgcaacaagtcaggatatt
attaattcttttcaaagtattagacaagaaatggaagcttatacacccagattaactcag
gtcctctcaagtaatgctgctagcagtaccatcacagcactatcacctggaggagcactt
atgcagggaggggcacagcaagccataaaccagatggtgccaaatgatattcaatctgaa
ttgaaacacttgtatgtggctgttggagaacttctccggcatttctggtcttgctttcct
gttaatacaccattcctagaagaaaaggtaatgaaaatgaaaagtaatttggaacggttc
caagttacgaagctctgcccattccaagagaaaattcggagacagtatttaagcacaaat
ttggtaagtcacatagaagaaatgctccagacagcctacaacaagcttcattcatggcag
tcacggcgccttatgaagaagacgtga
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