Dipodomys spectabilis (banner-tailed kangaroo rat): 122117644
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Entry
122117644 CDS
T07891
Symbol
Copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122117644 (Copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsp04147
]
122117644 (Copb1)
Membrane trafficking [BR:
dsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122117644 (Copb1)
Exosome [BR:
dsp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122117644 (Copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
CRAL_TRIO_2
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
122117644
NCBI-ProteinID:
XP_042547318
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLVELKEHPAHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNMIDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgctgagaatgtgtgttacacgttaattaacgtgccaatggattcagaacca
ccatctgaaattagcttaaaaaatgacttagaaaaaggagatgtcaagtccaagacagaa
gctttgaagaaagtaatcatcatgattctgaatggtgaaaagcttcctgggcttttgatg
accatcattcgctttgtgctacctcttcaggatcacaccatcaaaaaactacttctggta
ttttgggaaatcgttcctaaaacaaccccagatgggagacttttacatgaaatgattctt
gtatgtgatgcatacagaaaggatcttcagcatcctaatgaatttattcgaggatctact
cttcgctttctttgcaaattgaaggaagcagagttgcttgaaccattaatgccagctatt
cgtgcttgtttggaacatcgacacagctatgttaggagaaacgctgttttggctatctat
actatctacagaaattttgaacatcttatacctgatgctcctgaactgatacatgatttt
ctggtgaatgagaaggatgccagttgcaaaaggaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattatctaagtacctgtattgatcaagttcaaacatttgga
gacattctacaattagttattgttgaactgatttataaggtctgtcatgctaatccatca
gaacgggctcgttttattaggtgtatttataacctattgcagtcatctagccctgctgta
aaatatgaagctgctgggacattagtaacactttcaagtgcaccaactgccatcaaggct
gctgctcagtgttacatcgatttaattataaaggaaagtgacaacaatgtaaagctcata
gttctagaccgattagtagaattaaaagagcatcctgctcatgaaagagtcctccaggat
ctggtaatggacatcctaagagtattgaccacaccagacttagaagtacgcaagaaaact
cttcagttagcactggatcttgtgtcttctaggaatgttgaagagctggttattgtcttg
aagaaggaagtaattaaaacaaataatgtatctgagcatgaagacactgacaaatacaga
caactccttgtacgaacattgcattcctgttcggtccgatttccagatatggctgcaaat
gttattcctgtgttaatggaatttcttagtgacaataatgaagcagcagctgctgatgtc
ttggagtttgttcgtgaggccattcagcgttttgataacctgagaatgctgattgttgag
aagatgcttgaagtctttcatgctattaaatctgtcaagatttatcgaggagccttatgg
atcctgggagaatattgcagtaccaaagaagacattcagagtgtgatgactgaagtccgc
aggtcccttggggagataccaattgtagaatcagaaataaagaaagaagctggtgaatta
aaacctgaagaagaaataactgtggggccagttcagaaattggttactgaaatgggtacc
tatgcaactcagagtgctctcagcagttctagaccaaccaagaaagaggaagacagacct
cccctgagaggattccttctggatggagatttctttgttgctgcctcccttgctacaacc
ctgactaagattgcattgcgctatgtagctttggttcaggagaagaaaaagcaaaattct
tttgttgctgaagctatgctgctcatggcaactatccttcatttgggaaaatcctctctt
cctaagaagccaattactgatgatgatgtagaccgaatatccctgtgcctcaaggttttg
tctgaatgttcacctttaatgaatgacattttcaataaggaatgcagacaatctctctct
catatgttatctgccaaacttgaagaagagaagctatctcaaaagaaagaatctgaaaag
aggaatgtgacagttcaacctgatgaccctatttccttcatgcaactaactgctaagaat
gaaatgaactgtaaggaagatcagtttcagctgagtttgttggcagcaatgggtaacaca
cagaggaaagaggcagcagatcctctagcatccaaacttaacaaggtcacccagttgaca
ggtttctcagatcctgtatatgcagaagcttatgttcatgtcaatcagtatgatattgtc
ctggatgtacttgttgtgaatcaaaccagcgatactttgcagaactgcacattagagtta
gctactctaggggatctgaaacttgtggaaaaaccatctcctttgactcttgctcctcat
gattttgcaaatattaaagcaaatgtcaaggtagcatcaacagaaaatggaataattttt
ggcaatatagtttatgatgtctctggagcagcaagtgacagaaattgtgtggttctcagt
gatatccacattgacatcatggactatatccagccagcaacttgcaccgatgctgaattc
cgtcagatgtgggccgaatttgaatgggaaaacaaagtaacagttaacaccaatatgatt
gatctaaatgactatttacagcacatactaaagtcaaccaacatgaagtgcctcactcca
gagaaggccctttctggttactgtggctttatggcagccaacctttatgctcgttccata
tttggagaagatgcacttgcaaatgtcagcattgaaaagccaattcaccaaggaccagat
gctgctgttactggccatataagaattcgtgcaaagagtcagggaatggccttaagtctt
ggagataaaatcaacttgtctcagaagaaaacaagtatataa
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