Dipodomys spectabilis (banner-tailed kangaroo rat): 122117652
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Entry
122117652 CDS
T07891
Symbol
Dchs1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
122117652 (Dchs1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122117652 (Dchs1)
Cell adhesion molecules [BR:
dsp04515
]
Cadherins
Cadherin related
122117652 (Dchs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
122117652
NCBI-ProteinID:
XP_042547331
LinkDB
All DBs
Position
Unknown
AA seq
3294 aa
AA seq
DB search
MQKGLGIGPSSPGMKSPRPLLLLPLLVLLGAGLPGAWGQAGSLDLQIDEEQPAGTLIGDI
SAGLPAGMAAPPMYFISAQEGSGVGTDLAIDEHSGVVRTARVLDRERRDRYRFTAVTPDG
ATVEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPARDADAGRLGTQGYSLSG
DGAGETFRLETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVT
LLDINDHAPSFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGP
FSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTV
IFLSADGSPRVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLV
CVARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPEALPE
VALPGSFVVRVTAQDPDQGSNGQVTYSLAPGTHTHWFSIDPTSGIVTTAASLDYELEPQP
QLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATD
ADSGPFGLLSYSLGAGLGTSGSPPFRIDAHSGDVCTTRTLDRDQGPSSFDFTVTAVDGGG
LKSMVYVKVFVSDENDNPPQFYPREYAASLSVQSSPGTAVLRVRAHDPDQGPHGRLSYHI
LAGNSPPLFTLDEHSGLLTVAWPLTRRANSVVQLEIGAQDGGGLKAEPSARVNISIVPGT
PTPPIFEQLQYVFSVPEDVAPGTSVGIVQARNPPGRSGPVSLTLSAGDPRGLFALDSTSG
LLKTLRPLDRELMGPVLELEVRAGSGVPPAYAIARVRVLLDDVNDNSPAFPASEDTVLLP
PNTAPGTPIYTLRAVDPDSGVNSRITFTLLAGGDGAFTVDPTTGHVRLMGPLGPPGRPDH
ELELEARDGGSPPRTSHFRLRVMIQDLGTHGVGPRFNSPSYRVDLPSGTAPGTQVLQVQA
QAPDGSPVTYHLAADGARNPFGLESQSGWLWLRAALDRESQELYTLKVMAVSGSKAELGQ
QTSTATVRVSILNQNDHSPRLSEDPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTYSL
PQLSEDSKAFRIHPQTGEVTTLHTLDREQQSSYQLLVQVQDAGSPPRSTTGTVHIAVLDL
NDNSPTFLQASGAAGGGLPVQVPDRVPPGTPVTTLQAKDPDEGENGTVLYMLTGPGSELF
SLHPHSGELLTAASLIRAERPHYVLTLSAQDQGSPPRSASLQLLVQVLPSARVAEPPSDL
AEPDPAAPVPVVLTVTAAEGLQPGSLLGSVAPPEPPGVGALTYTLVGGADPEGTFALDAT
SGRLYLARPLDFETGPAWRALTVRAEGPGGAGARLLRVQVRVQDENEHAPAFARDPLALA
LPENPEPGAALYTFRASDADGPGPNSEVRYRLLRQEPPVPALRLDARTGALSAPRGLDRE
TTPALLLLVEASDRPSNASRRRAARVSARVFVTDENDNAPVFASPSRVRLPEDQPPGPTT
LHVVARDPDLGEAARVSYRLAAGGDGHFRLHASTGALSVVRPLDREQRAEHILTIVASDH
GSPPRSSTQLLTVSIVDVNDEAPTFQQQEYSVVLRENSTPGTSLLTLRATDPDLGANGQV
TYGGVSGESFSLDPNTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHVTVRVTVEDE
NDHAPTFGNAHLSLEVPEGQDPQTLTTLRASDPDVGANGKLEYHILDGDPSGAFTLDVAS
GEFGTVRPLDREVEPSFQLQIEAQDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEV
PEDAPAGTLLLQLQAHDPDAGANGRVTYYLGAGTAGAFLLEPTSGELRTATALDREHLPS
YTFSVSAVDSAAAGPLSSTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLALA
TLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVTRSPVALGPRDRVLFIVATDLG
RPARSATGVVIVGLQGEPERGPRFPRASSEAVLRENAPPGTSVVSPKAVHAGGSSGPIIY
SILSGNEKGIFSIQPNTGAITVRAAEGLDFETSPRLRLVLQAESGGAFAFSVLTLTLQDA
NDNAPRFLRPHYVAFLPESRPLEGPVLQVEADDLDQGSGGQISYSLAASQPARGLFHVDP
ATGTITTTAILDREIWAETRLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQPWELR
VSEDALLGSEIAQVTGNDVDSGPVLWYVLSPSGPQDPFSIGRYGGRVSLTGPLDFEQCDH
YHLQLLAHDGPHEGHANLTVLVEDVNDNTPTFSHSLYQVMLLEHTPPGSAILSVSATDRD
SGANGHISYHLASPVEGFSVDPNNGTLFTTVGTEALSHEGPGVLDVVLEARDHGAPRRAA
RATVHVQLQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEATDADGSRTHATVDYSIIS
GNRGRVFQLEPRLAEAGEGVGPGPQALGCLVLLEPLDFETLTQYNLTVAASDRGQPPRSS
AVSVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAELLHVEASDADPGPHGLVHFTLSSG
DPLGLFELDESSGALRLAHPLDCETQSRHQLVVQATDPAGAHFALAPVTVEVQDVNDHGP
AFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGKLRYSLLEAGPGPEGREAFALNSSS
GELRARVPFDYEHTGSFRLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPE
GAQRGHSLGHVQATDEDGGADGLVLYSLASSSPYFGINQTTGALYLRVDSRAPGSGTATS
GGGGRARRETPRELRLEVVARGPLPGSRSATVPVTVDITHTALGLAPDLNLLLVGAVAAS
LGVVVVLALAALVLGLVRARNRKAESAPGPMSQAAPLASGSLQKLGREPPSPPPSEHLYH
QTLPSYGGPGAGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFPRVASVASSLAARG
PDSGIQQDADGLSDTSCEPPAPDTWYKGRKAGLLLPGAGATLYREEGTPATATAFLGGCG
LSPAPTGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLLSWCPQFQPLASVFTEIA
RLKDEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPANTAVARAIFPPASHRSPISHEGS
LSSAAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSTESGLEPPDDTELHI
NT seq
9885 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggggctgggcatcgggccctccagccctggcatgaagagccccaggcccctc
cttctgctgccactgctggtgctgctgggagcggggttgccaggagcctggggtcaggct
ggaagcctggacctgcagattgatgaggagcagccagcaggcacactgatcggggacatc
agtgcagggcttccagcaggcatggcagctcctcctatgtacttcatctctgcccaggag
ggcagcggtgtaggcacagacctggccatcgatgaacacagtggggttgtccgtacggcc
cgtgtattagaccgtgagcggcgggaccgctaccgcttcacagcagtcaccccagatgga
gccaccgtggaagtcacagttcgagtggctgacatcaatgaccacgcacctgccttccca
caggctcgagctgccctgcagatacctgaacatacagctcttggcacccgctacccactg
gagcctgctcgtgatgccgatgctggccgcctaggaacccagggctattcgctatctggt
gatggggctggagagaccttccggttggagacacgtcctggtcctgatggggccccagta
cctgagctagtagttactggggagctggaccgggagaaccgctcacactacatgttacag
ctggaggcctatgatggtggctctcctccacggagggcccaagccctgttggatgtgaca
ctgctggacatcaatgaccatgccccatcttttaatcagagccgttaccatgctgtagtg
tcggagagcctggccccaggaagtcctgtcttgcaggtgtttgcatctgatgctgatgct
ggtgccaatggggctgtgacttacgagatcaaccgaaggcagagtgagggtgatggacct
ttctccattgatgcacacacagggttactgcgactagagaggccactggactttgagcaa
cggcgggtccatgaactggtggtgcaggcacgggatggtggagctcacccagagctgggc
tcagcctttgtgactgtgcatgtgcgagatgccaatgacaatcaaccctccatgactgtc
atcttcctgagtgcagatggttctccccgagtgtctgaggctgcaccacctggacagctg
gttgctcgcatctctgtgtcagacccagatgatggtgactttgctcatgtaaatgtgtcc
ttggaaggtggcgaaggccactttgcccttagcacccaagacagcgtcatctacctggta
tgtgtggctcggcgactcgaccgggaggagagagatgcctataacttgcgggttacagcc
acagactccggctcacccccactgagggctgaagctgcctttgtgctgcatgtcacagat
gtcaatgacaacgctcctgccttcgaccgtcagctctaccggcccgaagccttgcctgaa
gttgcactgcctggcagctttgtcgtacgggtgacagcccaggatcctgaccaaggttcc
aacggtcaagtgacctatagcttggctcctggcacccacactcactggttctccatcgat
ccaacttcaggcatcgtcaccactgctgcctcactggactatgagttggaacctcagcca
cagcttattgtggtggccacggatgggggccttccccctttagcctcctctgccacagtt
agtgtggccctgcaagatgtgaatgataatgagccccagttccagagaactttctacaat
gcctcactgcctgaggggacccagcctggaacctgtttcctgcaggtgactgccacagat
gctgacagtggcccctttggcctcctctcctattccttgggtgctggacttggaacttct
ggatctcccccatttcgcattgatgcccacagtggtgatgtgtgcaccacccggaccctg
gatcgtgaccagggcccttccagctttgactttacagtgacagctgtggatgggggaggc
ctcaagtccatggtgtatgtgaaggtgtttgtgtcggatgagaatgacaacccacctcag
ttttatccacgcgaatacgctgccagtctgagtgtccagagctcaccaggcacagctgtg
ctgagggtgcgtgcccacgaccctgaccagggaccccatggaagactctcttaccacatc
ctagcgggcaatagcccccctctcttcaccttggatgagcactcagggcttttgacagta
gcctggcccttgaccagacgggctaattctgtggtgcagctggagataggggctcaggat
ggaggtggcctgaaggctgaacccagtgcccgcgtcaacatcagcattgtgcctggaacg
cccacaccacctatatttgagcaactacaatatgtcttttctgtgccagaagatgtggca
ccaggcaccagtgtgggtatagtacaggcacgcaacccaccaggtcgctctgggcctgtg
agccttaccctatctgctggagatccccgaggactcttcgccctagattcgacctcagga
ctgttaaaaacacttcgccctctagaccgagagcttatgggaccagtgttggagctggag
gtgcgagcaggcagtggggtacccccagcttatgccatcgctcgggtgcgtgtgctgctg
gatgatgtgaatgacaactcccctgctttccctgcatctgaagacactgtattactgcca
ccaaacactgctccaggaactcccatctacacactgcgggctgtggaccctgactcaggg
gttaacagccggatcacctttaccctgcttgctggaggtgatggagctttcaccgtggac
cccactacaggccatgtacggcttatgggacctctggggcctccaggaaggccagatcat
gagctggagctagaagcacgggatgggggctccccaccacgcaccagccattttcgactt
cgggtcatgatacaggacttggggacccatggagtaggtccccgattcaacagtcctagc
taccgtgtggatctgccctcaggtaccgcccctggaactcaggtcttgcaagtgcaggcc
caggcaccagatgggagccctgtcacctatcaccttgcagcagatggagccagaaacccc
tttggcctcgaatcacagagtgggtggctatggttacgggcagcactggaccgtgagtcc
caggagttatatacactgaaggtaatggcagtatctgggtccaaagctgagttagggcaa
cagacaagtacagccacagtgagggtcagcatcctcaaccaaaatgatcacagtccccgc
ctgtccgaagatcccaccttcctggctgtggctgagaaccagccccctgggaccagtgta
ggccgggtttttgccactgaccgagactccggacctaatggacgtctgacctacagcctg
ccacagctgtcagaggacagcaaagccttccgcatccaccctcagactggggaagtgacc
acactccacaccttggaccgagagcagcagagcagttaccagctcctggtgcaagtgcag
gatgcggggagccctcctcgaagcaccacaggcacagtgcacattgcagtgcttgacctc
aatgacaacagccccaccttcctgcaggcttctggggctgctggtgggggacttcctgta
caggtaccagaccgtgtgcctccaggaactccagtgacaacactgcaggccaaggatccg
gatgaaggggagaacgggaccgtcctttacatgctcactggtcctggctcagagctcttc
tcgctgcaccctcactctggagaactgctcactgcagcatccctgatccgtgcagagcgg
ccccactacgtgctgacactgagtgctcaagatcaaggcagccctcctcggagcgccagc
ctccagctgctggtgcaggtgcttccctctgctcgcgtggccgagccaccgtcggatctg
gcagagcctgacccggcagctccagtacctgtcgtgctgacggtgacagccgctgagggg
cttcagccgggatccctgttgggctccgtggcgcctccagagccacctggtgtgggcgcg
ctcacctacaccctggtaggtggcgctgaccccgagggcacctttgcgctggatgcgacc
tcgggacgcttgtacctggcgcggcctttggactttgagactggccctgcttggcgcgcg
ctcacggtgcgcgccgaggggccgggaggcgcgggcgcgcggctgctgcgagtgcaggtg
cgcgtgcaggacgagaacgagcacgcacctgcctttgcgcgcgaccccctcgcgctggcg
ttacccgagaaccccgagcccggcgcggcgctgtacaccttccgcgcgtcggatgccgac
ggcccgggccccaacagcgaagtgcgctaccgtctgctccgccaggagccgccggtgccg
gcgctgcgtctggacgcgcgcaccggggcgctcagcgctccgcgcggcctggatcgcgag
accacgcccgcgctgctgctgctcgtggaagccagcgaccggcccagcaatgccagccgc
cgccgcgcagcccgcgtttccgcgcgtgtctttgtcacggatgaaaatgacaacgcaccg
gtgttcgcctcgccctcccgcgtgcgcctccccgaggaccagccgcctgggcccaccacc
ctgcacgtggtggcccgagatccggacctgggggaggcggcgcgcgtgtcctatcgcctg
gcagctgggggagacggccacttccggctgcacgcgagcactggagccctgtccgtggtg
cggcccttggaccgagagcagcgagctgagcatatactgaccatcgtggcttcagaccac
ggctccccgcctcgctcatccactcagctcctgactgtcagcatcgttgatgtcaacgat
gaggctcccactttccagcaacaggagtacagcgtcgtcttgcgtgagaacagcacccct
ggtacatcgctgctcaccctgcgggcaactgaccctgacttgggggccaatgggcaagtc
acttatggaggtgtttctggcgaaagcttctctctggacccaaacactggagttctcact
actctccgcgccctggatcgagaggaacaagaggagatcaacttaacagtatatgcacgg
gacaggggctcaccccccttgttaactcatgtcacagtacgtgtgaccgtggaagatgag
aacgaccatgctccaacctttgggaatgcccacctttctctggaagtacctgagggccaa
gacccccagactcttactacactacgggcctctgacccagatgtaggagccaatgggaag
ttggagtaccacatcctggatggggatccatcaggcgcctttaccctagatgttgcctct
ggggagtttggcactgtaaggccactagaccgggaagtggaaccatcattccagctgcag
atagaagcccaggatggaggccagccagctctcagtgctactctgcttgtgacagtgact
gtactagatgccaatgaccatgccccagccttccctgttcctgcctactcagtggaggtg
cccgaagatgcacctgcagggacactgctgctgcaactgcaggctcatgatcctgatgct
ggggccaatggccgtgtgacctattacctgggtgcaggcacagcaggagccttcctgcta
gagccaacctctggagaactgcgtacagccacagcgctggacagagaacaccttcccagc
tacaccttttctgtgagtgcggtggatagtgcagcggctgggcccctgagcagcacagta
cctgtcaccatcacggtacgcgatgtcaatgaccacgcacccactttccctaccagtcct
ctgcgtctgcgcctcccccgtccaggccccagcctcagtaccccaacactggctctggcc
acactgcgagctgaagatcgtgatgctggtgccaacgcctccattctataccggctggca
ggcacaccacctcctggcaccaccgtggactcttacacaggtgaaatccgggtgacccgc
tctcctgtagctctgggaccccgagatcgtgtcctcttcatcgtggctactgatcttggc
cgtccagctcgctctgccactggagtggtcattgttggacttcaaggggagcctgaacgt
ggaccccgctttccccgagcaagtagtgaagctgtgctccgtgaaaatgcacccccaggg
acttctgttgtctcccctaaggctgtccacgcagggggctcaagtggaccaatcatctat
agcattctcagtggaaatgagaaagggatattctctatccagcctaatacaggagccatc
acagttcgtgcagccgaggggctggactttgagacgagcccgcgtctgcgactggtgctg
caggcagagagtggaggagcctttgccttctctgtgctgaccctgaccctgcaagatgcc
aatgacaatgctccccgtttcctgcgaccccactatgtggcttttctgccagaatctcgg
cccttggaagggcccgtactgcaggtggaggcagatgacctggatcaaggctctggagga
cagatctcctatagtctggctgcctcccagccagcacgaggcttattccacgtagaccca
gccacaggcacgatcactaccacagctatcctggatcgggagatctgggctgaaacacgg
ctagtactaatggctacagacagagggagcccggccctggtgggctcagccacactgaca
gtgatggtcattgataccaatgacaaccgtcctaccatcccccagccctgggagctccga
gtgtcagaagatgcattgttgggctcagaaattgcacaggtaacagggaatgatgtggac
tctggtccagtgctatggtatgtgctgagcccatctgggccccaggatcctttcagtatt
ggccgctatggaggacgtgtctccctcacgggccccttagactttgagcagtgtgaccac
taccatctgcagctgctggcacatgatggacctcatgagggccacgccaacctcacggtg
cttgtggaggatgtcaatgacaacacacctaccttctcacatagtctctaccaggtgatg
ctgcttgagcatacaccaccgggcagtgccattctctctgtctctgctacggaccgagac
tcaggtgccaatggccacatttcctaccatctggcttctcctgtggagggcttcagtgtt
gaccccaacaacggaactttgttcacaacagtaggaacagaggccttaagccatgagggg
ccaggagtgttggatgtggtactggaagcacgagatcacggagctccacgccgggcagcc
cgagccacagtacatgtccagctgcaagaccagaatgaccatgccccaagcttcactttg
ccacactaccgtgtggctgtgactgaagatctgccccctggttccaccctgctcaccctg
gaggccacggatgctgatggaagccgcacccatgccactgtagactatagcatcattagt
ggcaacaggggccgggtcttccagctggaacctcggttggctgaggctggggagggtgtt
ggaccgggtcctcaggcattgggatgcctggtactgcttgagccactggactttgaaacc
ctaacgcagtacaacctaaccgtggctgcatctgaccgagggcagccaccccgaagttca
gctgtgtccgtcactgtcactgtactagatgtcaatgacaatccacctgtctttacccga
gcatcctaccgtgtgacggtacctgaggacatgcctgtgggcgctgagctgctgcatgtg
gaggcctctgatgctgaccccggccctcatggccttgtgcatttcaccctcagctcaggt
gaccccctggggctctttgagctggatgagagctcaggtgccttgcgactggctcaccct
ctggactgtgagacccagtctcgacatcagctcgtagtgcaggctactgaccctgctggg
gcacactttgctttggcaccagtgacagtcgaggtccaggatgtgaatgaccatggccca
gccttcccactgaacttgctcagtaccagcctggctgagaaccagcctccaggcactctt
gtgaccactctgcatgcgatcgatggggatgccggggcttttgggaagctccgctatagt
ctgttggaggctgggccagggcctgagggccgtgaggcgtttgcactgaacagctccagt
ggagagctgcgagcacgagtaccctttgactatgagcacacaggaagcttccgactgctg
gtgggtgctgcggatgctggcaatctctcggcttctgtcactgtgtcagtgctagtgact
ggagaggatgagtatgatcccgtgttcctagctccagcattccacttccaagtgccagaa
ggtgcccagcgaggccacagcctgggccatgtgcaggccacagatgaggatggaggtgct
gatgggctggtgctctattcccttgcctcctcctctccctattttggtatcaaccagact
acaggcgccctgtaccttcgagtggacagtcgggctccaggcagtggaacagccacctct
gggggcgggggacgggcccggcgtgaaacgccacgggagctaaggctggaggtagtagca
cgggggcctctgcccgggtcccggagtgccacagtgccagtgactgtggatatcacccat
actgcactgggactggcacctgatcttaacctgctcttggtaggggctgtggcagcctcc
ttgggagttgtggtggtacttgcactggcagctctggttctagggcttgttcgggcccgt
aaccgcaaggctgagtcagctcctggcccaatgtcacaggcagcacccttagccagtggc
tccctgcagaagctgggccgggaaccacccagtccaccaccctcagaacacctgtatcac
cagactctccctagctacgggggaccaggagctggaggcccttacccccgtggcggctcc
ctggacccttcacattcaagcggccgaggctccgcagaggctgcagaggatgatgagatc
cgcatgatcaatgagttcccgcgtgtggccagtgtggcatcttccctggctgcccgtggt
cctgactcaggcatccagcaggatgcagatggactcagtgacacatcctgtgagccacct
gcccctgacacctggtataagggccgcaaggcagggctactgctgccaggtgcaggagcc
actctgtatcgagaggaggggaccccagctaccgccacagcctttcttggggggtgtggc
ctgagccccgcccccactggggactatggattcccagcagatggcaagccgtgtgtggca
ggtgcgctgacggccattgtggctggcgaagaggagctccgcggcagctataactgggac
tacctgctgagctggtgccctcagttccagcccctagccagtgtcttcacagagatcgct
cggctcaaggatgaagcccggccctgccccccagctccccgtattgacccaccacccctc
atcactgctgtggcccatccaggagccaagtctgtgccccccaagcctgccaacacagct
gtagcccgtgccatcttcccacccgcctctcatcgctcccccatcagtcatgaaggatcc
ctgtcctcagccgccatgtcccccagcttctcaccctcactgtctcctctggctgctcgc
tcacccgttgtctcaccattcggagtggcccagggcccttcagcttcagcactcagcaca
gagtctggtctggagccacctgatgacacagagctacacatctag
DBGET
integrated database retrieval system
