Dipodomys spectabilis (banner-tailed kangaroo rat): 122117675
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Entry
122117675 CDS
T07891
Symbol
Cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122117675 (Cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122117675 (Cstf3)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122117675 (Cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
122117675
NCBI-ProteinID:
XP_042547374
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MSGDGAAEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFAAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAAEGNGPVESNAVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacggcgctgcggagcaggcagctgagtatgtaccagagaaggtgaagaaa
gccgaaaagaaattagaagagaatccatatgaccttgatgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaagttgaaaagctatttcagagatgccttatgaaggttttacacattgattta
tggaagtgctacctttcctatgttcgcgaaacaaagggtaaactaccaagttacaaagaa
aaaatggctcaagcttatgactttgcactggataaaattggaatggaaattatgtcttat
cagatttgggtggattacatcaatttcttaaaaggcgtggaagctgttgggtcttatgca
gaaaatcagaggataacagctgttcgaagagtttatcagcgaggttgtgttaatccaatg
atcaacatcgaacagctctggagagactataacaagtatgaagagggtatcaatattcat
ttagctaaaaaaatgattgaagatcggagtagagactacatgaatgctagacgtgtagca
aaggaatatgagaccgtaatgaaaggcttggatcggaacgctccttcagtgcctcctcag
aatactcctcaagaagctcagcaagtagatatgtggaagaagtatatacagtgggaaaag
agcaaccctcttcgtacagaggatcagactcttataacaaaaagagttatgtttgcttat
gaacagtgcctgcttgtattaggccatcatcctgatatttggtatgaagctgcccagtat
ctggagcagtcaagtaaactgcttgcagagaagggcgatatgaataatgccaaattgttt
agtgatgaagctgctaatatatatgaaagagccataagcactttattgaagaagaatatg
cttctttattttgcatatgctgattatgaagagagtcgcatgaaatatgagaaggttcac
agtatatataacagacttctggcaattgaagatattgatcccaccttggtatatatccaa
tatatgaaatttgcaaggagagcagaaggtatcaaatctggaagaatgatatttaaaaaa
gcaagagaagataccagaacccgccaccatgtctacgttactgcagcactcatggaatac
tactgtagtaaagacaaatcagttgcctttaagatttttgagctgggactaaagaaatat
ggagacattccagaatatgtcttggcttatattgactatctatctcacctcaatgaggac
aataatacccgagttttgtttgaacgagttttaacgtctggaagcctccctcctgagaag
tctggagaaatctgggcccgatttctagcttttgaaagtaatattggtgatttagcgagt
atactcaaagtggagaaaaggcggtttgcagcattcaaagaagagtatgaaggcaaagag
acagccttactggttgacagatataagttcatggatttatatccttgctctgcaagtgaa
ctgaaagccctgggatataaggatgtctcccgtgctaagctagcagctataattccagac
ccagttgtagctccttctatagtgcctgttctgaaagatgaagtggatagaaaaccagag
taccctaagccagacactcagcagatgattccatttcagccacgacatttagcacctcca
ggcttacaccctgtcccaggcggagtgtttccagtgccccccgcagccgtcgtcttgatg
aaacttctccctcctcctatttgtttccagggtccttttgttcaagtggatgaattgatg
gaaattttccgaagatgcaagataccaaatactgttgaggaagctgtgaggatcattact
ggtggggccccagagctagctgcggaaggcaatggcccggtggaaagtaacgcagtactc
accaaggccgtcaaaaggcccaacgaggattcagatgaagatgaggaaaagggggccgtt
gtcccccctgttcatgacatttacagagcgaggcagcagaagcggattcgatga
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