Dipodomys spectabilis (banner-tailed kangaroo rat): 122117923
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Entry
122117923 CDS
T07891
Symbol
Rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04068
FoxO signaling pathway
dsp05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
122117923 (Rag1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
122117923 (Rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122117923 (Rag1)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122117923 (Rag1)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122117923 (Rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
122117923
NCBI-ProteinID:
XP_042547725
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MAASLPPTLGFSSAPDEIQHPHIKFAEWKFKLFRVRSFEKAPEEAQKEKKEEASEGNPAL
EQSPSVPEKAGVQKAVLIQPALKGHPKFSKKVHDDEKIRAKAIHQANLRRFCRICGNSFQ
TDKHRRRYPVHGPVDAKTQSLLRKKEKRATSWPDLIARVFRIDVKADVDSIHPTEFCHNC
WSIMHRRFSSAPREVYFPRNTTMEWHPHSPSCDVCHSTRQGLRRRRHHTHGQLSKRIKMM
LDRARQVRQRKRRARAKVSSKAVMKQIASCSKIHLSTQLLAVDFPAYFLKSISCQICEHI
LADPVETSCKHVFCRVCIFRCLKVMGSYCPSCRYPCFPTDLESPGKSFLSILNSLLVKCP
AKECNEEVSLEKYNHHVSSHKESKETLVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVK
AFADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFL
SCSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGHHPFEWQPPLKQVSSRTDVGIID
GLSGLSTSVDDYPVDTIAKRFRYDAALVSALMDMEEEILEGLRSQDLEDYLSGPFTVVVK
ESCDGMGDVSEKHGSGPAVPEKAVRFSFTIMRISVAQGARAAKVFKEAKPNSELCCKPLC
LMLADESDHETLTAILSPLIAEREAMKSSELRLDMGGILRTFRFIFRGTGYDEKLVREVE
GLEASGSVYICTLCDATRLEASQNLVLHSITRSHAENLERYEVWRSNPYHESVEELRDRV
KGVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKHPGASKEERKRWQATLDKH
LRKKMNLKPIMRMNGNFARRLMTKETVEAVCELIPSQERHEALRELMDLYLKMKPVWRSS
CPAKECPEALCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAW
ASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKALKDCGFTI
DSKVTVGDTSTPEDYLESQDSMEF
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctccttgccacccaccttgggattcagttctgctcctgatgaaattcaacat
ccacatattaaattcgcagagtggaaatttaagctattcagggtgagatcttttgaaaag
gcaccggaggaagcccaaaaggaaaaaaaggaggaggcatctgaggggaaccctgcttta
gagcaatcgccatcagtcccggaaaaggctggagttcagaaggcagtcctgattcaacca
gccttgaagggccaccctaagttttcaaagaaagtccacgatgatgagaaaataagagcc
aaagccatccaccaagccaacctccgacgcttctgccgcatctgcgggaattcttttcaa
actgataaacaccggaggagataccctgtccatgggccggtggatgcgaaaacccaaagc
ctgttacggaagaaggaaaagagagccacttcctggcctgacctcatcgccagggttttc
cggattgatgtgaaagcagatgtcgactcgatccaccccactgaattctgccacaattgc
tggagcattatgcaccgcagatttagcagtgctcctcgtgaggtttacttccccaggaac
acaaccatggagtggcacccccactcaccatcctgtgatgtctgccactctacccggcag
gggctcaggaggaggagacatcacacccatgggcagctcagcaaaagaatcaaaatgatg
cttgatcgagccagacaagtccggcagcgcaagagaagagctcgggcaaaggtcagcagc
aaggcagtcatgaagcagattgccagctgcagtaagatacatctcagcacccagctcctg
gcggtggacttccccgcctacttcctgaaatccatctcctgccagatttgtgaacacatt
ctggcagacccggtggagaccagctgcaagcacgtcttttgcagggtctgtatcttcaga
tgtctcaaagtcatggggagctattgcccctcgtgtcgctatccctgtttccctactgac
ttggagagtccagggaaatcctttctgagcatcctgaactctctcctagtcaaatgcccc
gccaaagagtgcaacgaggaggtcagcttggaaaaatacaaccaccacgtctcaagccac
aaggagtcgaaagagacgttggtgcacatcaataaaggagggcgaccccggcagcatctc
ctgtccctgacccgcagggctcagaagcaccgactgagggagctcaagctgcaagtgaag
gcgtttgccgacaaagaggaaggtggagacgtaaaatccgtgtgcctgaccttgttcttg
ctggcgctgagggcgagaaacgaacacagacaagccgacgagctggaagccatcatgcaa
ggccggggctcgggcctgcagccggccgtttgcttggctatccgggtcaacaccttcctc
agctgcagccagtaccacaagatgtacaggaccgtgaaagccatcacgggcaggcagatc
ttccagccgctccacgccctgcgcaatgccgagaaggtcctcctgccgggccaccaccct
ttcgagtggcagccacctctgaagcaggtgtcatcccgcaccgacgttggcatcatcgac
ggtctgtcggggctgtccacctcggtggatgattacccggtggacaccattgccaagcgg
ttccgctacgacgcggccttggtgtcagccctgatggacatggaagaagagatcttggaa
ggcctgcgatcccaggatctcgaggactacctgagcgggccgttcaccgtggtggtgaag
gagtcttgcgacggcatgggggacgtgagtgagaagcatgggtcgggaccagccgtcccg
gaaaaggccgttcgcttctccttcaccatcatgaggatcagcgtggcccagggcgcacgc
gcggcgaaggtgttcaaggaagccaagcccaactcggagctgtgctgcaagcccctgtgc
ctgatgctggcggatgagtctgaccacgagaccctgacggccatcctcagccctctcatc
gccgagagggaggccatgaagagcagcgagttgaggctggacatgggagggatcctccgg
actttcaggtttatcttcaggggcaccgggtacgatgagaaactggtccgggaagtggaa
ggcctggaggcttcgggctccgtctacatctgtaccctgtgtgatgccacccgcctggag
gcctcccagaatctcgttttgcattcgatcaccaggagccacgcggagaacttggagcgc
tacgaggtctggcgttccaacccctaccacgaatcggtggaagagctgcgggatcgcgtg
aaaggcgtctccgccaagcctttcatcgagaccgtcccttccatcgacgccctccactgt
gacattggcaacgccgcggagttctacaagatcttccagctggagatcggagaggtgtat
aaacaccccggggcttccaaagaggaaaggaaacgctggcaggccacgctggacaagcat
ctgcggaagaagatgaacctcaagcccatcatgaggatgaatggcaactttgccaggagg
ctcatgaccaaagagacggtggaggcggtctgcgaattaatcccctcccaggagaggcac
gaagctctcagggagctcatggacctttacctgaaaatgaagcccgtgtggcgctcctca
tgtccagctaaagagtgcccagaggccctctgccagtatagtttcaactcgcagcgcttt
gccgagctgctgtctaccaagttcaagtataggtatgagggcaaaatcaccaattacttt
cacaagaccttggcacacgtccctgaaattattgagagggatggctctattggggcttgg
gctagtgaaggaaacgaatctgggaacaaactgttcagacgtttccggaaaatgaacgcc
aggcagtccaagtgttatgaaatggaagatgttttgaagcatcactggctgtatacgtcc
aaatatctccagaagtttatgaatgctcacaaagcattaaaagactgtgggtttaccata
gattctaaggtaaccgtcggggacacgtcaaccccagaagactatctggaaagccaagat
tcaatggagttttga
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integrated database retrieval system
