Dipodomys spectabilis (banner-tailed kangaroo rat): 122118037
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Entry
122118037 CDS
T07891
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122118037
Cell adhesion molecules [BR:
dsp04515
]
Cadherins
Protocadherins
122118037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
122118037
NCBI-ProteinID:
XP_042547821
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MQKLKRMHLNRQVMVFIFAAFLRLVFSEPMRFSVSEETGSGSFVAHLTKAMGLGMGELTA
RSARVVSDDDKQYLLLDSKTGDLLLREKLDREEICGPKEPCVMHFQVFLEMPVQFFQGEI
LIEDINDHAPVFPDREVLLKIPENSHLGTLFPLTLAEDLDVGINGIQTYTVSPNAHFYVL
TRNNSEGKKYPELVQDKALDREEQAELSLTLVALDGGTPPRSGTVLVRVLIMDVNDNAPE
FVHSPYEVRVLENSPPDSVILNVLAKDADDGHFGSVSYGFFQASDDIKQTFSINEITGEI
RLKKALDFEKVTSYRVEMEATDGGGLTGKGTVFIEVVDVNDNAPEITISSLTSSIPENAL
ETVVSVFRIRDRDSGENGKMVCSIPDNLPFLLKPTFKKFYTLVTEKPLDREIRDQYNITI
TVSDLGTPRLQTQLTFTLQVSDVNDNAPEFTQSSYTLWVRENNSPALHIGTISATDRDSG
SNAQLTYSLLPGPQPGPDAAAALVSINADSGQLFALRALDYEALQAFEVRVRAADRGSPP
LSSQALVRVQVLDANDNSPFVLYPLQNASAPCTELLPRAAEPGYLVSKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWPHNGEVRTARLLSERDAPKHRLLLLVKDNGEPPRSASVTLHV
LLVDGFSQPYLPLPDAAAPERAQPDRLTAYLVIALAAVSSLFLLSLLLFVAVRLCRRSRA
RSLAGCALPDGPLPGHLLGVSGTGTLAHSYQYEVCLTGDSGNGEFNFLKPILPKLFVQDA
VREVQENPHCGNDFVLGC
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagctaaagagaatgcatcttaacaggcaagtgatggtctttatttttgcagcg
ttcttgcgtctggttttctcggagcctatgcgtttttctgtgagtgaggaaacagggagt
ggttcctttgtagcccatcttaccaaagccatgggtctgggaatgggggagctgactgcc
cggtctgccagggtggtttctgacgatgacaagcagtacttactattggattctaagact
ggagatttacttctgagggagaaattagaccgagaagagatatgtggccctaaggaaccg
tgtgtgatgcatttccaagtgttcctggaaatgccagtgcaattttttcagggagaaata
ctgattgaagatataaatgatcatgctccagtattccctgatagggaagtgctcttgaaa
ataccggaaaacagccacctaggaactctgtttccattaacattagcagaggatttggat
gtgggcattaatgggattcaaacctacacagtcagccccaatgctcacttttatgtgctc
actcgaaataatagcgaaggcaagaagtacccagaattggtccaggacaaagcactggac
cgcgaggaacaggctgagctcagcttaacccttgtggctctggatggtgggactccacct
aggtctggcacagtcttggttcgagtcctgatcatggacgtcaatgacaatgctcccgag
tttgtgcactctccatatgaggtgcgggtcctggagaacagcccaccagattctgtgatt
ctaaacgtgttagccaaagatgcagatgatgggcactttgggagtgtttcctatggcttc
ttccaagcatcagatgacattaagcaaactttctcaataaatgagatcacgggagaaatt
cgactgaaaaaagcattggactttgagaaagttacttcttaccgtgtggaaatggaggcc
acggatggaggaggcctcactgggaagggcactgtattcatagaggtggtggatgtgaat
gacaatgccccggaaattaccatctcttcactcaccagctccatcccagaaaatgctctg
gagacggtagtttctgtttttcgaattcgagatagggattctggagagaatggaaagatg
gtatgctctattccagacaatctgccattccttctaaaaccgactttcaagaaattctac
actttggtgacagagaagcccttggacagagaaataagagaccaatacaacatcaccatc
actgtctccgacttggggactcccaggctgcaaacccagctcaccttcaccctgcaggtg
tccgacgtgaacgacaacgcccccgaattcacgcagtcctcctacaccctgtgggtccgc
gagaacaacagccccgccctgcacattggcaccatcagcgccacagacagagactcgggc
agcaacgcccagctgacctactcgctgctgcccggcccgcagcccggccccgacgcggcg
gcggcgctggtgtccatcaacgcggacagcgggcagctgttcgccctgagggcgctggac
tatgaggccctgcaggcgttcgaggtgcgcgtgcgcgccgccgaccgcggctcgcccccg
ctcagcagccaggcgctggtgcgcgtgcaggtgctggacgccaacgacaactcgcccttc
gtgctgtacccgctgcagaacgcgtctgcgccctgcaccgagctgctgcccagggcggcc
gagccgggctacctggtgagcaaggtggtggcggtggaccgcgactcgggccagaacgcc
tggctgtcgttccagctgctcaaggccacggagcccgggctgttcagcgtgtggccgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcgcccaagcacaggctg
ctgctgctggtcaaggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtg
ctgctggtggatggcttctcgcagccctacctgccgctgcccgacgcggcggcgcccgag
cgcgcgcagcccgaccgcctcactgcctacttggtcatcgcgctggcggccgtgtcttct
ctcttcctcttgtctctgctgctcttcgtggccgtcaggctgtgcaggaggagcagggcg
cgctcgctggccggctgcgcgctgcccgatggccccttgcctggacacctgctgggcgtg
agtggcacggggaccctggcccacagctaccagtatgaggtgtgtctcacaggagactct
gggaatggtgagttcaactttctgaaacctatactcccaaagctcttcgtgcaggatgct
gtgagagaagttcaggagaacccccactgcggtaacgactttgtgttgggatgttag
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