Dipodomys spectabilis (banner-tailed kangaroo rat): 122118038
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Entry
122118038 CDS
T07891
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122118038
Cell adhesion molecules [BR:
dsp04515
]
Cadherins
Protocadherins
122118038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
122118038
NCBI-ProteinID:
XP_042547822
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MPASGSNVEKVEMIPSNRQVRFFVVMMFVSLVRPEPMRFSVPEETESGSFVAGLTKDLGM
ALGELASRSARVVSDDYKQHLLLDPQNGDLLLREKLDREELCGPREPCVLHFQVFLEMPV
QAFPGELLIEDINDHAPVFPDREVLLKIPENSHPGTLFPLTLAEDLDVGINGIQTYTVSP
NAHFNVLTRNNSEGKKYPELVQDKALDREEQAELSLTLVALDGGTPPRSGTVLVRVLVMD
VNDNAPEFVHSPYEVRVLENSPPDSVILNVLAKDADDGHFGSVSYGFFQASDDIKQTFSI
NEITGEIRLKKALDFEKVTSYRVEMEATDGGGLTGKGTVFIEVVDVNDNAPEITISSLTS
SIPENAAETLVSIFRVGDRDSGDNGKTVCSIPDDLPFILKSTFKNFYTLVTERPLDREIR
DQYNITITVSDLGTPRLQTQHTFTLQVSEVNDNAPEFTQSSYTLWVRENNSPALHIGTIS
ATDRDSGSNAQLTYSLLPGPQPGPDAAAALVSINADSGQLFALRALDYEALQAFEVRVRA
ADRGSPPLSSQALVRVQVLDANDNSPFVLYPLQNASAPCTELLPRAAEPGYLVSKVVAVD
RDSGQNAWLSFQLLKATEPGLFSVWPHNGEVRTARLLSERDAPKHRLLLLVKDNGEPPRS
ASVTLHVLLVDGFSQPYLPLPDAAAPERAQPDRLTAYLVIALAAVSSLFLLSLLLFVAVR
LCRRSRARSLAGCALPDGPLPGHLLDVSGTGTLAHSYQYEVCLQGGVGTNEFNFLKPVIP
NSLFHDT
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgccagcatcaggctccaacgtggagaaggtagagatgattccctcaaacaggcaagtg
aggttctttgttgttatgatgtttgtgtctcttgttcgcccggagccaatgcgcttttct
gtgccagaagaaacagaaagcggttcctttgtagccggtcttaccaaagatctcggcatg
gcacttggggaattggcctcccgatctgccagggtggtgtctgacgattataaacagcat
ttgctgctggaccctcagaatggagatttgctactgagggagaaattagaccgggaggag
ctctgtggccccagggaaccgtgtgtgttgcatttccaagtgttcctggaaatgccagtg
caagcttttccaggagaattactgattgaagatataaatgatcatgccccggtttttcct
gatagggaagtgctcttgaaaataccggaaaacagccacccaggaactctgtttccatta
acattagcagaggatttggatgtgggcattaatgggattcaaacctacacagtcagcccc
aatgctcactttaatgtgctcactcgaaataatagcgaaggcaagaagtacccagaattg
gtccaggacaaagcgctggaccgcgaggaacaggctgagctcagcttaacccttgtggct
ctggatggtgggactccacctaggtctggcacagtcttggttcgagtcctggtcatggac
gtcaatgacaatgctcccgagtttgtgcactctccatatgaggtgcgggtcctggagaac
agcccaccagattctgtgattctaaacgtgttagccaaagatgcagatgatgggcacttt
gggagtgtttcctatggcttcttccaagcatcagatgacattaagcaaactttctcaata
aatgagatcacgggagaaattcgactgaaaaaggcattggactttgagaaagttacttct
taccgtgtggaaatggaggccacggatggaggaggcctcactgggaagggcactgtattc
atagaggtggtggatgtgaatgacaatgccccggaaattaccatctcttcactcaccagc
tccatcccagaaaatgctgctgagaccttagtctctatcttcagagttggagatagggat
tctggagataatggaaagacagtatgctctattccagatgaccttcctttcatcctaaaa
tctactttcaagaatttctacactttggtgacagagaggcccttggatagagaaataaga
gaccaatacaatatcaccatcactgtctccgacttggggactcccaggctgcaaactcag
cacaccttcaccctgcaggtgtccgaggtgaacgacaacgcccccgaattcacgcagtcc
tcctacaccctgtgggtccgcgagaacaacagccccgccctgcacattggcaccatcagc
gccacagacagagactcgggcagcaacgcccagctgacctactcgctgctgcccggcccg
cagcccggccccgacgcggcggcggcgctggtgtccatcaacgcggacagcgggcagctg
ttcgccctgagggcgctggactatgaggccctgcaggcgttcgaggtgcgcgtgcgcgcc
gccgaccgcggctcgcccccgctcagcagccaggcgctggtgcgcgtgcaggtgctggac
gccaacgacaactcgcccttcgtgctgtacccgctgcagaacgcgtctgcgccctgcacc
gagctgctgcccagggcggccgagccgggctacctggtgagcaaggtggtggcggtggac
cgcgactcgggccagaacgcctggctgtcgttccagctgctcaaggccacggagcccggg
ctgttcagcgtgtggccgcacaatggcgaggtgcgcaccgccaggctgctgagcgagcgc
gacgcgcccaagcacaggctgctgctgctggtcaaggacaatggcgagccgccgcgctcg
gccagcgtcacgctgcacgtgctgctggtggatggcttctcgcagccctacctgccgctg
cccgacgcggcggcgcccgagcgcgcgcagcccgaccgcctcactgcctacttggtcatc
gcgctggcggccgtgtcttctctcttcctcttgtctctgctgctcttcgtggccgtcagg
ctgtgcaggaggagcagggcgcgctcgctggccggctgcgcgctgcccgatggccccttg
cctggacacctgctggacgtgagtggcacggggaccctggcccacagctaccagtatgag
gtgtgtctgcagggaggtgttggcaccaacgagttcaatttcctgaaacccgttattccg
aatagtctttttcatgacacttaa
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