Dipodomys spectabilis (banner-tailed kangaroo rat): 122118066
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Entry
122118066 CDS
T07891
Symbol
Rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122118066 (Rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsp03041
]
122118066 (Rbm22)
Spliceosome [BR:
dsp03041
]
Complex B
Other components
Prp19-related factors
122118066 (Rbm22)
Complex C
122118066 (Rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
122118066
NCBI-ProteinID:
XP_042547848
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
MEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctctctgggttccaacacctacaacaggcagaattgggaggatgcggacttt
cccattctgtgccagacgtgtcttggagaaaacccatacatccgaatgaccaaagaaaaa
tatgggaaagaatgcaaaatttgtgccaggccattcacagtgtttcgctggtgtcctgga
gtccgcatgcgcttcaagaagactgaagtgtgccagacctgcagtaaattgaagaatgtt
tgtcagacctgccttttagaccttgagtatggcttgcccatccaggtccgtgatgcagga
ttgtcttttaaagatgacatgccaaagtcagatgtcaacaaagaatactatacacagaat
atggagagagaaatctctaactctgatggaacacggccagttggcatgctggggaaagcc
acatctaccagtgatatgctgctcaaactggcccggaccacaccttactacaaaaggaat
cggccccacatttgctccttctgggtgaaaggagagtgtaagagaggagaagaatgtcca
tacaggcacgagaagcctacagatccagatgatcctcttgctgaccagaacattaaagat
cggtattatggcatcaatgaccccgtagcagataagcttctaaagagagcttcgactatg
cctcgtctggacccgcctgaggataagactatcacaacactttatgttggtggtttgggc
gatacgattactgagacagatctcaggaatcacttctaccagtttggagagatccgaaca
atcactgtggtgcagagacagcagtgtgctttcatccagtttgccacaaggcaggctgca
gaagtggctgctgagaaatccttcaataagttgatcgtcaatggccgcagactcaacgta
aaatggggaagatcccaagcagccagaggaaaagagaaagagaaggatggaaccacagac
tctggtatcaagctagaacctgtacctggtctgccaggagctcttcctcctcctcctgcg
gcagaagaagaagcctctgccaactacttcaacttgcccccaagtggtcctccagctgtg
gtgaacatcgccctgccaccaccccctggaattgccccgcccccacccccaggttttgga
ccacacatgttccacccaatgggaccaccccctcctttcatgagggctccaggaccaatc
cactacccttctcaggaccctcagaggatgggagcgcatgccggaaaacacagcagcccc
tag
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